BGIOSGA006260

From RiceWiki
Revision as of 18:39, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA006260

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006260, complete gene.

LocusTag

OsI_07648

Ensembl Transcript ID

BGIOSGA006260-TA

Ensembl Protein ID

BGIOSGA006260-PA

Length

2873

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22663060..22665932

Sequence Coding Region

22665919..22665932,22665161..22665364,22663942..22664716,22663060..22663800

Genome Context

<gbrowseImage1> name=IndicaChromosome02:22663060..22665932 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:22663060..22665932 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGAGTTGGATCAACAGCCTGAGCAAGAGGGGATACATAGGAAGCTACCACTACGAGAAGGATGCCAAGTACAGGCCATTCAGTGCCCTGCTCCCCGAGGGTTCAAACCCCAAGATGCTCTATGTTAAGCTCGTCCTCCTCATCCTCATGTGTGGCTCCTTCGTCAGTCTCCTCAACTCGCCGTCTATCCACCATGACGATGAACACCTCACCCAGTCATCAGCTGGAGTGCCGAGAGTGAGCTACGAGCCTGATGATACCAGGTACGTGTCGGACGTGACGGTGGACTGGCCAAAGATCTCCAAGGCGATGCAGCTGGTCGCCGGAGCGGAACACGGCGGCGGCGGCGCGAGGGTGGCGCTGCTCAACTTCGACGACGACGAGGTGCAGCAATGGAGCACGGTGCTGCCACGGACGGCCGCCGCGGTGGCGCGCCTGGAGCGCGCCGGGAGCAACGTGACGTGGGAGCACCTGTACCCGGAGTGGATCGACGAGGAGGAGTTGTACCACGCGCCGACGTGCCCCGACCTGCCGGAGCCGGCGGTGGACGCCGACGGCGACGGCGAGGAGGTGGCCGTGTTCGACGTCGTCGCGGTGAAGCTGCCGTGCCGGCGCGGGGGTAGCTGGTCCAAGGACGTGGCCCGGCTGCACCTGCAGCTCGCCGCGGCGCGCCTCGCCGCCACGCGCGGGCGCGGCGGCGCCGCCGCGCACGTGCTCGTGGTGAGCGCGAGCCGGTGCTTCCCGATCCCGAACCTGTTCCGGTGCAGGGACGAGGTGGCGCCGCGCGACGGCGACGTGTGGCTGTACCGGCCGGACGCCGACGCGCTCCGCCGGGATCTCGCCCTCCCCGTCGGCTCCTGCAGGCTCGCCATGCCGTTCAGCGCGCTGGCGGAGCCGCACGTCGCGCCGGCGGCGCCGGCGGCGCCGCCGCGGCGGGAGGCGTACGCGACGATCCTCCACTCTGAGGAGCTGTACGCGTGCGGCGCGCTGTACGACCGCGTCGTCTTCCTCGACGCCGACCTGCTGGTGCAGCGCCCCATGGCGCCGCTCTTCGCCATGCCGGAGGTGAGCGCGACGGCGAACCACGGCACGCTGTTCAACTCCGGCGTGATGGTGGTGGAGCCGTGCGGCTGCACGCTCCGCCTGCTCATGGACCACATCGCCGACATCGACTCCTACAACGGCGGCGACCAGGGGTACCTCAACGAGGTCTTCTCGTGGTGGCACCGCCTCCCGTCGCACGCCAACTACATGAAGCACTTCTGGGAGGGGGACTCCGGCGAGCGGCTCGCCGCCGCCAGGCGCGCCGTGCTCGCCGCCGAGCCCGCCGTGGCCCTCGCCGTCCACTTCGTCGGGATGAAGCCGTGGTTCTGCTTCCGCGACTACGACTGCAACTGGAACTCGCCGCAGCTCAGGCAGTTCGCCAGCGACGAGGCGCACGCGCGGTGGTGGCGCGCGCACGACGCCATGCCGGCGGCACTCCAGGGGTTCTGCCTGCTCGACGAGCGCCAGAAGGCGCTGCTCCGGTGGGACGCCGCCGAGGCGAGGGCGGCCAACTTCTCCGACGGACACTGGAGGGTCCCCATCGCCGACCCTCGCCGGAACATCTGCGCCACCGCCGCCGGCGACGGCGAGGCGGCGGCGGCGTGCGTCGAGAGGGAGATCAAGAACAGGCGGGTGGAAGGGAACAGGGTGACCACGTCGTACGCCAAGCTCATCGACAACTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MTSWINSLSKRGYIGSYHYEKDAKYRPFSALLPEGSNPKMLYVKLVLLILMCGSFVSLLNSPSIHHDDEHLTQSSAGVPRVSYEPDDTRYVSDVTVDWPKISKAMQLVAGAEHGGGGARVALLNFDDDEVQQWSTVLPRTAAAVARLERAGSNVTWEHLYPEWIDEEELYHAPTCPDLPEPAVDADGDGEEVAVFDVVAVKLPCRRGGSWSKDVARLHLQLAAARLAATRGRGGAAAHVLVVSASRCFPIPNLFRCRDEVAPRDGDVWLYRPDADALRRDLALPVGSCRLAMPFSALAEPHVAPAAPAAPPRREAYATILHSEELYACGALYDRVVFLDADLLVQRPMAPLFAMPEVSATANHGTLFNSGVMVVEPCGCTLRLLMDHIADIDSYNGGDQGYLNEVFSWWHRLPSHANYMKHFWEGDSGERLAAARRAVLAAEPAVALAVHFVGMKPWFCFRDYDCNWNSPQLRQFASDEAHARWWRAHDAMPAALQGFCLLDERQKALLRWDAAEARAANFSDGHWRVPIADPRRNICATAAGDGEAAAACVEREIKNRRVEGNRVTTSYAKLIDNF</aaseq>

Gene Sequence

<dnaseqindica>1..14#569..772#1217..1991#2133..2873#ATGACGAGTTGGATGTAAGCCTGGACCGTTGAAGCATGGAACTGACTGTTCTTGATGACTTCTTACAAGAGCAGATGAAGAAAGAGAGCCATTCCTTTAAAAAAAAAACAAGAAGAAAGAAAGAAAGAAAGCTATGACACATATGACTTTCTGGTCTTGGTCTGAAAGTAATAGAGGAGATGTTATGAATTTGGTCATTTGAAGAAAAGTAGAAAATGACCAAATGCAGAAATAGTGATTGCTGATCACATATTGGTAAAAGCTTGCGTCAAAAAAACATATTGGTAAAAGCCAAAGAAAACTTAACACCTAAGTTTTTTTTTTGTTGAAACCAGCACCTTAGTAAAGACTGACAAGTAATTTTAGCTACAGGTAATGATTTGGTCACAAGGGCCAATCTTGTTCAGTTTAACCATATGATTTGTGACCTTTGTTAGAACTTTTGAAGCCCTCAAGGGCACGTGTGCTATCGATTTCTACATATGGTCTAAATAGTTATGCAATATTCTGAAGAAAATTGCAACCGGATTGTGCACTAATTGTGATTATTTACGTGTGCTAATTTCAGCAACAGCCTGAGCAAGAGGGGATACATAGGAAGCTACCACTACGAGAAGGATGCCAAGTACAGGCCATTCAGTGCCCTGCTCCCCGAGGGTTCAAACCCCAAGATGCTCTATGTTAAGCTCGTCCTCCTCATCCTCATGTGTGGCTCCTTCGTCAGTCTCCTCAACTCGCCGTCTATCCACCATGACGATGAACACCTCACCCAGTAAGCAAAAAAACCTTCAATTGAAGAAAACAAACTTTAAAAGTTGTAAAAGAAAACATCTTTTCAAGAGATAAATTTTAGAACAGATACTGCGTTCTCTAGTGTAAATATACCATTATCTTTATTTTATACAAGAAGGTACCAAATTTTACATAAAAAAATGTAGCATATATCTTAGTACCTCCTCATTTTAAATCCATTAACGAGATAACACGCTCTCTAGTGTAAAATATACTAGTACCTTAATCTCGTAGAAGGAGGTACTAAAATTTACGTAAAAGATATAGCACATCTTCGTATCTTCTCAAATACCATAAAATTACTTTTTTAAAAAAATGATTTTGAGACGTGTCACAATTTTTTAAGCCAAAGGATCATAAAACCACTGTTGATATGATGGTCAGTGATTAAGCCTTTGCTTTGTCTGAACTTTGAAACGCGCAGGTCATCAGCTGGAGTGCCGAGAGTGAGCTACGAGCCTGATGATACCAGGTACGTGTCGGACGTGACGGTGGACTGGCCAAAGATCTCCAAGGCGATGCAGCTGGTCGCCGGAGCGGAACACGGCGGCGGCGGCGCGAGGGTGGCGCTGCTCAACTTCGACGACGACGAGGTGCAGCAATGGAGCACGGTGCTGCCACGGACGGCCGCCGCGGTGGCGCGCCTGGAGCGCGCCGGGAGCAACGTGACGTGGGAGCACCTGTACCCGGAGTGGATCGACGAGGAGGAGTTGTACCACGCGCCGACGTGCCCCGACCTGCCGGAGCCGGCGGTGGACGCCGACGGCGACGGCGAGGAGGTGGCCGTGTTCGACGTCGTCGCGGTGAAGCTGCCGTGCCGGCGCGGGGGTAGCTGGTCCAAGGACGTGGCCCGGCTGCACCTGCAGCTCGCCGCGGCGCGCCTCGCCGCCACGCGCGGGCGCGGCGGCGCCGCCGCGCACGTGCTCGTGGTGAGCGCGAGCCGGTGCTTCCCGATCCCGAACCTGTTCCGGTGCAGGGACGAGGTGGCGCCGCGCGACGGCGACGTGTGGCTGTACCGGCCGGACGCCGACGCGCTCCGCCGGGATCTCGCCCTCCCCGTCGGCTCCTGCAGGCTCGCCATGCCGTTCAGCGCGCTGGCGGAGCCGCACGTCGCGCCGGCGGCGCCGGCGGCGCCGCCGCGGCGGGAGGCGTACGCGACGATCCTCCACTCTGAGGAGCTGTACGCGTGCGGCGCGCTGGTGCGGCGCAGAGATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTGGCTGTGGTCGCTGACGGAGTACGACCGCGTCGTCTTCCTCGACGCCGACCTGCTGGTGCAGCGCCCCATGGCGCCGCTCTTCGCCATGCCGGAGGTGAGCGCGACGGCGAACCACGGCACGCTGTTCAACTCCGGCGTGATGGTGGTGGAGCCGTGCGGCTGCACGCTCCGCCTGCTCATGGACCACATCGCCGACATCGACTCCTACAACGGCGGCGACCAGGGGTACCTCAACGAGGTCTTCTCGTGGTGGCACCGCCTCCCGTCGCACGCCAACTACATGAAGCACTTCTGGGAGGGGGACTCCGGCGAGCGGCTCGCCGCCGCCAGGCGCGCCGTGCTCGCCGCCGAGCCCGCCGTGGCCCTCGCCGTCCACTTCGTCGGGATGAAGCCGTGGTTCTGCTTCCGCGACTACGACTGCAACTGGAACTCGCCGCAGCTCAGGCAGTTCGCCAGCGACGAGGCGCACGCGCGGTGGTGGCGCGCGCACGACGCCATGCCGGCGGCACTCCAGGGGTTCTGCCTGCTCGACGAGCGCCAGAAGGCGCTGCTCCGGTGGGACGCCGCCGAGGCGAGGGCGGCCAACTTCTCCGACGGACACTGGAGGGTCCCCATCGCCGACCCTCGCCGGAACATCTGCGCCACCGCCGCCGGCGACGGCGAGGCGGCGGCGGCGTGCGTCGAGAGGGAGATCAAGAACAGGCGGGTGGAAGGGAACAGGGTGACCACGTCGTACGCCAAGCTCATCGACAACTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006260