Os07g0129800

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Revision as of 08:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0129800| Description = Legume lectin, beta domain containing protein| Version = NM_001065354.1 GI:115470440 GeneID:4342321| Length = 3294 b...")
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Gene Name

Os07g0129800

Description

Legume lectin, beta domain containing protein

Version

NM_001065354.1 GI:115470440 GeneID:4342321

Length

3294 bp

Definition

Oryza sativa Japonica Group Os07g0129800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:1607473..1610766

Sequence Coding Region

1607473..1609512,1610668..1610766

Expression

GEO Profiles:Os07g0129800

Genome Context

<gbrowseImage1> name=NC_008400:1607473..1610766 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:1607473..1610766 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggcgggacacagaggagggagcggcgaacttcgtgagggagcaggagagaacttcggcgaactccctccggcgcaggagggtctccgcggcacccccattccatcacctgccatgaaatacacctttcttctcttcctttgccttgtatcctttgtcacttctagtgagcaccagtttgtcttctccggcttcaccggcagcaacctcgtccttgatggtgccgccaccatcaccgaagatgggctccttgagctcaccaatggcgcgaataatatcgaaggccatgcgttctacccaactccgttgcgctttcgcaagtcgccaaacgacatggtacaatctttctcggtttcatttgcgttcagcatcctccaaaaatatgccaatcggagcaacgatggcatggccttcttcatagcaccaagcaagaacttctctgatgcatcattgcctgcacaatatttgggcctcctcaacaaccaaaacaatggcaatagaagcaacgatttgttcgccgtcgagctcgacaccttccaaaacaaggagttccaagacatggatgacaaccatgtagggatcaatgtcaacagcatgaagtccttggatgcacactatgctggtttctatgaagacaggagtggcatcttcaggaaccttactcttgtcatccatgaggcaatgcaagtttggtttgattatgatggtgatgccaagaagattagtgtcaccttggctcctgccagattggccaagcccaagagacctctactgtctgtcacctacgacctctcaacggtggttgcagattcagcctacatcggtttctcagctgcaactggaggtgtagtcaacacaaaacactgtgttcttggatggagctttaggatgaatggccctgctcaagctattgatatctccaggttgcccaagctgccaaatcttggcagcaagaagtcccattcttctaggatcttggtaatcatatcaccggtggcaaccgctgtattgattttccttgttggtgttctccttgttctctgtgtacggaggcgactcaagtacacagagattcaagaagattgggaggttgagtttggtccgcatcgtttctcatacaaggttctgtatgatgccactgaaggatttaaggataagaacttacttggtgtcggaggatttgggaaggtgtataagggagtgcttccggtgtctaaacgagtggttgccgtgaagtgtgtttcgcatgagtcgagccaaggtatgaaggagtttgttgctgagattgtcagtatcggtcaacttcgacaccgaaaccttgtgcagttgctcggttattgtaggaggaaaggtgaactccttctggtctatgactatatgtcaaacggtagccttgacaactatttgtattgtgatttgaccgagccaacattggattgggcacagagatttaacattgtcaaaggtgtcacgtcaggactactctacctccatgagaaatgggggaagattgtaatccaccgagatatcaaggcaagcaacgtgcttcttgataaagatatgaatgcacgattaggtgactttggcctctcaagattatatgaccacggaaccgacccacaaactacgcacctggtaggcacaatggggtacctagccccagagctagtgttcacaggcaaggcatctcctgccacagacatatttgcctttggcgtattccttctcgaagtcacttgtggacaaaggccactcaacaacaatcaacaagataatcaacccccaatgctggttgattgggtccttgagcactggcagaaaggattactgcctgagacagtagacaaaagattgcagggcaactacaatgttgatgaggcatgtctagtgctgaagctaggtctattgtgttctcacccaatcgccatggaaaggcctaccatgagtcaagtccagagatacctcgacggcgacgcgccgctgccagagttggcaccgtcggagctgaagttcaacatggtggctctcatgcagggccaaggcttcgactcgtatgtcttgccatgtctgtctttgtcgtcggtggtgagcattgaaacctcacccgaggtagacgatgacactgctagtgtttga</cdnaseq>

Protein Sequence

<aaseq>MGAGHRGGSGELREGAGENFGELPPAQEGLRGTPIPSPAMKYTF LLFLCLVSFVTSSEHQFVFSGFTGSNLVLDGAATITEDGLLELTNGANNIEGHAFYPT PLRFRKSPNDMVQSFSVSFAFSILQKYANRSNDGMAFFIAPSKNFSDASLPAQYLGLL NNQNNGNRSNDLFAVELDTFQNKEFQDMDDNHVGINVNSMKSLDAHYAGFYEDRSGIF RNLTLVIHEAMQVWFDYDGDAKKISVTLAPARLAKPKRPLLSVTYDLSTVVADSAYIG FSAATGGVVNTKHCVLGWSFRMNGPAQAIDISRLPKLPNLGSKKSHSSRILVIISPVA TAVLIFLVGVLLVLCVRRRLKYTEIQEDWEVEFGPHRFSYKVLYDATEGFKDKNLLGV GGFGKVYKGVLPVSKRVVAVKCVSHESSQGMKEFVAEIVSIGQLRHRNLVQLLGYCRR KGELLLVYDYMSNGSLDNYLYCDLTEPTLDWAQRFNIVKGVTSGLLYLHEKWGKIVIH RDIKASNVLLDKDMNARLGDFGLSRLYDHGTDPQTTHLVGTMGYLAPELVFTGKASPA TDIFAFGVFLLEVTCGQRPLNNNQQDNQPPMLVDWVLEHWQKGLLPETVDKRLQGNYN VDEACLVLKLGLLCSHPIAMERPTMSQVQRYLDGDAPLPELAPSELKFNMVALMQGQG FDSYVLPCLSLSSVVSIETSPEVDDDTASV</aaseq>

Gene Sequence

<dnaseqindica>1255..3294#1..99#atgggggcgggacacagaggagggagcggcgaacttcgtgagggagcaggagagaacttcggcgaactccctccggcgcaggagggtctccgcggcaccgtgtgtgccgcctccgcctccgtccgtccccgcgtcgagggggcggctactcgtcgtgaccgccgttgtcgcctctgcgtcccgcatcacccgccgtcgccgccgcctcccgtgccgccgctggtgccttgtcacccgccgcctccgcgtcccgcagcgccgcccaccgcctaccgccaacccgtgagagagagagagtgagagagagaagagagagaggaagaggagtatgacatgtgggtcccacattttttttataaacaaaatggtgattggaataccacgtaggataaaactgttctggattgggtcgatgggggtaatttgtccggtattaaaagtctagggttaactatgtctggtttttgggtttagggagggtaatttggtcgactgcgatagtcaggagggggggtaattagtacttttccttttagatatacgtagtgaaatattgaaatcttacattaccaaaatatagacctatattaagatttgatatgtaagaatgatattagcatatttttcattaaaaatctttcatataactatattatatgggtaattataacatccttaaaaaaataccgaaaggtatcatattattttatacaaaacttgatacctacagaaactaggttatcgatctcgaggtattaaaattttagtgtataattttagtacctatagccatggtacttaagaggaccataaaatctctcatataaagcattgaagatttgttgccgacaagctgctaggtacagaagaaataaaaacaagttacttccaaaaaaaaatacgaacgtattaatatacatgtctgtaaaccagtttgaatgtgtacaaacatggcgtcaacatgtttcatacaaggaattttcctacgaagtttcgtgtggcaattaattatgttcgttaggtgcacgaaatataatttgaccaagctagatgctaccagactatactttgacctttttgggagaggaagtttcaataattcaagtctgtaatgcatgctggagaaaactcaaaactatatacagtagctcacaatgtcactttctctgcactaactattacaatagctaactagacattgctgccctgcagttctaattgttcattgttgatttgctgcaattcaattcacagcccattccatcacctgccatgaaatacacctttcttctcttcctttgccttgtatcctttgtcacttctagtgagcaccagtttgtcttctccggcttcaccggcagcaacctcgtccttgatggtgccgccaccatcaccgaagatgggctccttgagctcaccaatggcgcgaataatatcgaaggccatgcgttctacccaactccgttgcgctttcgcaagtcgccaaacgacatggtacaatctttctcggtttcatttgcgttcagcatcctccaaaaatatgccaatcggagcaacgatggcatggccttcttcatagcaccaagcaagaacttctctgatgcatcattgcctgcacaatatttgggcctcctcaacaaccaaaacaatggcaatagaagcaacgatttgttcgccgtcgagctcgacaccttccaaaacaaggagttccaagacatggatgacaaccatgtagggatcaatgtcaacagcatgaagtccttggatgcacactatgctggtttctatgaagacaggagtggcatcttcaggaaccttactcttgtcatccatgaggcaatgcaagtttggtttgattatgatggtgatgccaagaagattagtgtcaccttggctcctgccagattggccaagcccaagagacctctactgtctgtcacctacgacctctcaacggtggttgcagattcagcctacatcggtttctcagctgcaactggaggtgtagtcaacacaaaacactgtgttcttggatggagctttaggatgaatggccctgctcaagctattgatatctccaggttgcccaagctgccaaatcttggcagcaagaagtcccattcttctaggatcttggtaatcatatcaccggtggcaaccgctgtattgattttccttgttggtgttctccttgttctctgtgtacggaggcgactcaagtacacagagattcaagaagattgggaggttgagtttggtccgcatcgtttctcatacaaggttctgtatgatgccactgaaggatttaaggataagaacttacttggtgtcggaggatttgggaaggtgtataagggagtgcttccggtgtctaaacgagtggttgccgtgaagtgtgtttcgcatgagtcgagccaaggtatgaaggagtttgttgctgagattgtcagtatcggtcaacttcgacaccgaaaccttgtgcagttgctcggttattgtaggaggaaaggtgaactccttctggtctatgactatatgtcaaacggtagccttgacaactatttgtattgtgatttgaccgagccaacattggattgggcacagagatttaacattgtcaaaggtgtcacgtcaggactactctacctccatgagaaatgggggaagattgtaatccaccgagatatcaaggcaagcaacgtgcttcttgataaagatatgaatgcacgattaggtgactttggcctctcaagattatatgaccacggaaccgacccacaaactacgcacctggtaggcacaatggggtacctagccccagagctagtgttcacaggcaaggcatctcctgccacagacatatttgcctttggcgtattccttctcgaagtcacttgtggacaaaggccactcaacaacaatcaacaagataatcaacccccaatgctggttgattgggtccttgagcactggcagaaaggattactgcctgagacagtagacaaaagattgcagggcaactacaatgttgatgaggcatgtctagtgctgaagctaggtctattgtgttctcacccaatcgccatggaaaggcctaccatgagtcaagtccagagatacctcgacggcgacgcgccgctgccagagttggcaccgtcggagctgaagttcaacatggtggctctcatgcagggccaaggcttcgactcgtatgtcttgccatgtctgtctttgtcgtcggtggtgagcattgaaacctcacccgaggtagacgatgacactgctagtgtttga</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0129800, RefSeq:Os07g0129800