Os07g0130100

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Revision as of 08:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0130100| Description = Similar to Resistance protein candidate (Fragment)| Version = NM_001065355.1 GI:115470442 GeneID:4342322| Length = 2...")
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Gene Name

Os07g0130100

Description

Similar to Resistance protein candidate (Fragment)

Version

NM_001065355.1 GI:115470442 GeneID:4342322

Length

2359 bp

Definition

Oryza sativa Japonica Group Os07g0130100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:1623063..1625421

Sequence Coding Region

1623373..1625418

Expression

GEO Profiles:Os07g0130100

Genome Context

<gbrowseImage1> name=NC_008400:1623063..1625421 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:1623063..1625421 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctttcatgcttcttcttcttctcctgctctccctcatcctcaaccttgcatccccgaccaccgccgcttccggcgacggcaacggcgaccagttcatctactccggcttccatggctccaacctcaccgtcgacggcgccgcctccatcacaccggacggcctcctccagctaaccgacggcgcagcctacctcaaaggccacgcgttccacccatctccggtgcgcctccgccgcgacgtctccacgtccacgacgacgaccaccgtccgctccttctccgtcaccttcgtcttcggcatcgtctccgtctaccccgacttcagcgcccatggcatggccttcgtcgtctccccgacaaccaacctctcctcctccttgccggccaagtacctcggcctcaccaacgtccagaacgacggcaacgccagcaaccacatgctcgccgtcgagctcgacaccatccagagcgtcgagttcagggacatcaacgccaaccacgtcggcgtcgacatcaacggcctccagtccgtccgcgcctacaacgccggctactacgacgacgtctccggcgagttcaggagcttgaagctgatcagccgccaggcgatgcaggtctgggtggactaccatggcggcgagaagaagcagctcgacgtcaccatggctcctctcagaatggccaggcctgtcaagccgctgctctcggtcacccacgacctctccacggtgctcgccgacgtcgtctacctcggcttctcggcggcgaccggccgcgtgaattcgcgccactgcgttcttggctggagcttggggatcaacggaccagctcccgccattgacatcgacaagctgcccaagcttcctcgtgctgaacccaagccaagatccagggtccttgaaattgttctaccaattgtcactgcaacgattgtgctggttgtgggtggcgccattgttatggtggtgaggaggagatcgaggtacgccgagctacgggaagattgggaggttgagtttgggccgcatcgattctcgtacaaggaattgttccgcgcaaccgatggatttgcggataagcatctactcggttcaggaggatttggaaaggtgtaccgaggagtgcttcctaaatctaaattggaggttgccgtgaagaaagtgtcccacgaatcgagacaagggatgaaggagtttgttgctgagatagttagtattggacgtattcggcaccgtaatcttgtgcagttgctcggttactgtcgacggaagggtgagcttcttttggtgtatgcgtatataccaaatggtagcctcgataaatatctgtatagcgaggaggataagcctatactgagttgggctcaaaggttccgaatcattaaaggcatcgcatctggtttgctctacttgcacgagaggtgggaaaaagtggtagtgcaccgagacatcaaggcaggcaacatactcctcgacaaggacatgaacggacagctaggtgactttggcttggcaagactatacgaccatggcacggactcacaaaccacacatgtggttggcaccatgggatacctagcaccagagctcattcgcacgggcaaagcatcccctctcaccgatgtgttcgcgttcggcgtgttcctcctcgaggtcacctgtgggcagaaacctatcaaggagaagaaccctcaaggtagccacatagcgctggtcgactgggtgctcgagcattggcgcgacggttcactcatggacacggtggacgggaggctccacggcgagtacgacgccggtgaagcggcgctggtgctgaagctgggcctcctgtgctcgcacccgttcgccgcggcgaggcccgggatggggcaggtcacctgctgcctcgccggcgaggcgccgctgcctgagctgacgccggcggacatgggcttcgacgtgctggccatgatgcaggataagggattcgacacgtccgtcgtgtcgtatcccgatcttatgacgagctttggcaccatctccagcctctcaggaggaagataa</cdnaseq>

Protein Sequence

<aaseq>MSFMLLLLLLLSLILNLASPTTAASGDGNGDQFIYSGFHGSNLT VDGAASITPDGLLQLTDGAAYLKGHAFHPSPVRLRRDVSTSTTTTTVRSFSVTFVFGI VSVYPDFSAHGMAFVVSPTTNLSSSLPAKYLGLTNVQNDGNASNHMLAVELDTIQSVE FRDINANHVGVDINGLQSVRAYNAGYYDDVSGEFRSLKLISRQAMQVWVDYHGGEKKQ LDVTMAPLRMARPVKPLLSVTHDLSTVLADVVYLGFSAATGRVNSRHCVLGWSLGING PAPAIDIDKLPKLPRAEPKPRSRVLEIVLPIVTATIVLVVGGAIVMVVRRRSRYAELR EDWEVEFGPHRFSYKELFRATDGFADKHLLGSGGFGKVYRGVLPKSKLEVAVKKVSHE SRQGMKEFVAEIVSIGRIRHRNLVQLLGYCRRKGELLLVYAYIPNGSLDKYLYSEEDK PILSWAQRFRIIKGIASGLLYLHERWEKVVVHRDIKAGNILLDKDMNGQLGDFGLARL YDHGTDSQTTHVVGTMGYLAPELIRTGKASPLTDVFAFGVFLLEVTCGQKPIKEKNPQ GSHIALVDWVLEHWRDGSLMDTVDGRLHGEYDAGEAALVLKLGLLCSHPFAAARPGMG QVTCCLAGEAPLPELTPADMGFDVLAMMQDKGFDTSVVSYPDLMTSFGTISSLSGGR</aaseq>

Gene Sequence

<dnaseqindica>4..2049#aaaatgtctttcatgcttcttcttcttctcctgctctccctcatcctcaaccttgcatccccgaccaccgccgcttccggcgacggcaacggcgaccagttcatctactccggcttccatggctccaacctcaccgtcgacggcgccgcctccatcacaccggacggcctcctccagctaaccgacggcgcagcctacctcaaaggccacgcgttccacccatctccggtgcgcctccgccgcgacgtctccacgtccacgacgacgaccaccgtccgctccttctccgtcaccttcgtcttcggcatcgtctccgtctaccccgacttcagcgcccatggcatggccttcgtcgtctccccgacaaccaacctctcctcctccttgccggccaagtacctcggcctcaccaacgtccagaacgacggcaacgccagcaaccacatgctcgccgtcgagctcgacaccatccagagcgtcgagttcagggacatcaacgccaaccacgtcggcgtcgacatcaacggcctccagtccgtccgcgcctacaacgccggctactacgacgacgtctccggcgagttcaggagcttgaagctgatcagccgccaggcgatgcaggtctgggtggactaccatggcggcgagaagaagcagctcgacgtcaccatggctcctctcagaatggccaggcctgtcaagccgctgctctcggtcacccacgacctctccacggtgctcgccgacgtcgtctacctcggcttctcggcggcgaccggccgcgtgaattcgcgccactgcgttcttggctggagcttggggatcaacggaccagctcccgccattgacatcgacaagctgcccaagcttcctcgtgctgaacccaagccaagatccagggtccttgaaattgttctaccaattgtcactgcaacgattgtgctggttgtgggtggcgccattgttatggtggtgaggaggagatcgaggtacgccgagctacgggaagattgggaggttgagtttgggccgcatcgattctcgtacaaggaattgttccgcgcaaccgatggatttgcggataagcatctactcggttcaggaggatttggaaaggtgtaccgaggagtgcttcctaaatctaaattggaggttgccgtgaagaaagtgtcccacgaatcgagacaagggatgaaggagtttgttgctgagatagttagtattggacgtattcggcaccgtaatcttgtgcagttgctcggttactgtcgacggaagggtgagcttcttttggtgtatgcgtatataccaaatggtagcctcgataaatatctgtatagcgaggaggataagcctatactgagttgggctcaaaggttccgaatcattaaaggcatcgcatctggtttgctctacttgcacgagaggtgggaaaaagtggtagtgcaccgagacatcaaggcaggcaacatactcctcgacaaggacatgaacggacagctaggtgactttggcttggcaagactatacgaccatggcacggactcacaaaccacacatgtggttggcaccatgggatacctagcaccagagctcattcgcacgggcaaagcatcccctctcaccgatgtgttcgcgttcggcgtgttcctcctcgaggtcacctgtgggcagaaacctatcaaggagaagaaccctcaaggtagccacatagcgctggtcgactgggtgctcgagcattggcgcgacggttcactcatggacacggtggacgggaggctccacggcgagtacgacgccggtgaagcggcgctggtgctgaagctgggcctcctgtgctcgcacccgttcgccgcggcgaggcccgggatggggcaggtcacctgctgcctcgccggcgaggcgccgctgcctgagctgacgccggcggacatgggcttcgacgtgctggccatgatgcaggataagggattcgacacgtccgtcgtgtcgtatcccgatcttatgacgagctttggcaccatctccagcctctcaggaggaagataactcggctttttgtatataagtttcatacaagttcatcggtcacgaccagcagttgtggattaaaattttttgaacgtttttagataagctagaataatttttgaactaatttaggccaactctagacttgcagtatagtagacagagcaatgaaagcagaggactctgttttccattggtatcatcaatgaaagatgcagagtctcatttagactgaagaaaaaaattggagtagtcaccctctttgctgaaattatagactgaaacattcatctgttcaattcaaatgtcatacaagaaattgatgccc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0130100, RefSeq:Os07g0130100