Os07g0130500

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Revision as of 08:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0130500| Description = Conserved hypothetical protein| Version = NM_001188107.1 GI:297725344 GeneID:4342326| Length = 11449 bp| Definition...")
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Gene Name

Os07g0130500

Description

Conserved hypothetical protein

Version

NM_001188107.1 GI:297725344 GeneID:4342326

Length

11449 bp

Definition

Oryza sativa Japonica Group Os07g0130500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:1638247..1649695

Sequence Coding Region

1646130..1646375

Expression

GEO Profiles:Os07g0130500

Genome Context

<gbrowseImage1> name=NC_008400:1638247..1649695 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:1638247..1649695 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctggtgtcattgtgcccaagctattccctgaccacgggtactgtgcgacgtatgggtcgaccccttcattgtgcattattgccagcaagctggagttcagggttgccggtgtaaactccggcagcggtgcatctccatcaaggtattgcatgacctgccgcatgataggccttgctccgggtattgggtgtgagcacatcagcccaagtgtcaacaccaggcatgcctcatcgacgttgtag</cdnaseq>

Protein Sequence

<aaseq>MSGVIVPKLFPDHGYCATYGSTPSLCIIASKLEFRVAGVNSGSG ASPSRYCMTCRMIGLAPGIGCEHISPSVNTRHASSTL</aaseq>

Gene Sequence

<dnaseqindica>7884..8129#tgggagtcatcattcccacaccgccggcgagcaagccgattccaccgcgccgccgccttatctgcttcgccggccggcggctgctcgccggctaccttcctatacggcgccggctcggccagggcgtcgcgaggcaaggccgaggctggcctcatcgctcgcagccaaccagcagagcctgccggctgccgccggtgctatgcccgatggcgacgccctcgtcggcggcggccgccgccggaggaacggtggctgcatggggtttcttcggctcaggtagcacttgctactctcccgtaatcctgcttgccttcaatttctcatttctcgatttgggagcagttcttaccattttctagttgccatggcatatgaatgcttgtgtgatttagggtctaaattggtaatgctaaattgacaaacaacagataaatgatatgcttccatgattccatccaagtacatctacagtgctattataggttttgggctaattgttaccccaacatacatggccattcttgtctggtcctacactgaaaattgaataaaggattcatatatcatattgcttacacttttattatctataccatattctgaattgttgtttgataatcatttatccaatgggcagaatcgaccgatgttcatttagagaaaatatacaagaaaacacccagtataatgcaatagactaaggatctttttttttttcctatcgtcctgagaggcttgacatttcgccaattcttgtcatcagctgtggatatgacacaccggaagggtctaatcctctgttttccatcaatgctagcatgttcaggctcgtatcagttggcgtgaactctggaagtggcatgtctccgttgaggtatagcatgacatggttcatactgggccttgacctagcgaatggttgtgagcacaagagcccaagtttcagcacaaggcatgcctcatttatgttgcagtttccttgtagcctcttgtctattgtctccaccatcgatcctttctgccaatgctcaagtacccaatcaaccaacataaatcggtcaccttgtgcattctgcttgacaggcctttgcccacaggtgatctcaagaagaaatgtgccaaatgcgaacacatccgtaagaggagacggcttacctgttcgtaccaattccggggctaggtaacccatggtacctaccacacgtgtggtctgtgggtcagaaccatgatcgtatgactttgcaagaccaaaatctcctaaccgtccattcaattcactatcaagtagcacattgctggccttgatatctcggtggatgacaacactttcacactcctcatggaggtagagcaagcaagatgcaactcctttgatgatatggaacctcttattccaatctagcgacagtttgtcttcagaatataggtacttgtcaagactgccatttggcatgtagtcatagaccaaaagaagttcaccttttcgcctgcagtagccaagtagctgaacaaggtttcggtgtcgaaggcggccaatgctaacaatctcagtgatgaactcctttgttccttgccttgattcatgtgacaaccttttaactgcaacctccaatttgttcgttggaagtatgcctttatacacctttccaaatcctcctgtaccaagtaggttcttgttcttaaatccttctgtagcaaggaacaaatccttgtatgagaacctatttggcccaaactctgtctcccaatcttcccgtagctcggtatatgtcaatttcctccgcacaagaagaactaagagagcccctgcaacaaagatggatgctgcaatagtggctggcataatgatcttcaaaacctttgagcgaggccttggtccaacatgaggtaactttggtagcttccttatgtcaatcccagaagcagttccacccatgctgaagctccagccaagcacataatatcttgagttgatcaccccagtggctgatgagaagccaatgtatgctgtacctgggagcactgttgaaagattgtagatggctgagactagtggcagtgtaggtttagccactttgatgggagccaaggttacatcaatctgtgtggatcctgcatcatactcaacccacacttgcatcacgtcacggctaacaagcgtcaagttcttgaacacaccatttttgtcatcatagaagccagcatcccgggattgcacagagtggagactattaatgttgatgccaacatggttgtcactgatgtcctggaactcactgttttggatggtgtcaagctcaactgcgaatatatggttgcttgtgttgccgttgttctggtcattgaggatccctaaatactgggctggcagcgcgttggagaaactcttgtttgtggagataaagaaggccatgccatctgcacctttgtcaggaatagcagagaggatgctgaagatgaaggtgagcgaaaaagattgcacgtcaccagtgggatgcctacgaaattgcagaggagctgggtagagtgcatgacctttgaggttaaaggtgccattggtcagctgaaggagcccttctggtgttattgtagctgtgccatcaaggcttaggttggcttgactgaagccagagtagatgaactgctcctcagcaatggtgaaggatgcaaggtcgtggccaaggaatatgagttggcatagaattaaacgcttgtacatcttgccaggcatgaatgcaacctgttacaactctagattctagaaagatgcaataacaaagtactttataagataactgtgaacaatggcttgcggttgtctacccctctagtaatagtcaaactattgttatttttctcagtattgactcagccagctatgaaatatgatttttgtatattgctttatgtattttttctgtgctattctcttgtcaagtgaatagcttctcttttgactccttgctactttgatagagactactttgacaaaaggaacatttatcaccttttattttaactaaagacagtttgaactttccttggaaaaattgactaatcaaatttaataaagaaaaactatccaacatttgctagcgctgctgaatctcatacctccattttgccagccaagtgcttattgagatccaacagtactattgacctgtcaataactattaatgtatctccgaagacaaattctggccaatgaaatgtttctttctgatttccaatatctgaatttcgcatttgttgaataagtcaagaaatgcatcctgtgttacacgcctacaggttggttcctgttgccatcactgcagtcactttccctagtcttgtggtcatgtttgcaactgtgatgtgtgcactttgtgtttagctgaataaaatcttgtccagttatatggtctaaacttaatctccaaaacaagaggaagttaaacttgaatttaattctgaaatacagattttttttgaaggactcaaccaaaacaaatgggaaatctaatgggtatataaatgtttagataaacataaataacttgtgttgctaacaactttttttaccatactactttattttcttgagtacagcgaacggttatttaacaaatcttgtgttcacaagtaccaagtggagaacctttattgaattttgctcattggaaaccaatcttcattttttggggagctcattttattattggtcctgttgcagaggactggaactcgtcatatctcgacaagtgcaagcagatcttatggtaacttatccgttctttgttttgtaggatctaatgtttgttctgacctgatacaccccagattttcttttattccctgctgtgttttctatagttaaatactaatagtaatgccttggctcgtacatggggcacagaaatagaagaaaaatatttagaagaataataatttatgtcatttcttgttcagttatgcaagtgaaatatgtcctgcatccttgctagagtagatgacgaaattgtccaattctagttttggtagtctgtcttctccctttctgttttcttcttttctattcatgtgcctcattttgctcaagtttgtgactctgtgtacccactgcatcttctatttagaaggtcttgattttatcatcaaataaatttataatcccagttgagtatattaaactaaacataaccggcacatgaaaatgtggaaataaattttatgagaataaaattctgtagataggtaaaaagcattccaaacatataaacaagcacacctaaaactattgaagatcacatgcctcatctattcatcttccttctgagagtgaggtgctagatattgtgccaaaacttgttgctgatgaaggatctgttatggtgcatggactgaatcctttgttctgtatcaaggccatcacgtagaagcttaaatgtgttggcattgactcaggtagtggtatgtccttgttgagatattgcacgacttgcctcatatttggccttacgcttattaaagggtgggagcacagcaaccctatatttagtgctaggcaggcctcatcaatattgtattctccttgaagtttgatgtccactgtatcagcgagtgagcctttatgccaatgttcaagcacccaatcaataagaaccaattggtcgtcttctgtgttttgcatgacaggcttttgcccacaggtgacctcaagaatgaacatgccaaaggcaaatacatctgtaagaggggtcgctttgccaccgcgtgctagctctggagctaggtatcctatggtgccaaccactcgtgtggtttctggatcagtaccatgatcatacaaccttgcgagaccaaagtcacctatccgtgcatttgtgtcgttatcgaggagtacattgcttgccttaatgtctcgatgaatgataactttctcgctctcttcatgaaggtagagtaatccagatgctacacctttgatgatttggaatctttgagtccaatctaatgtaggcttgccctctttaccatataggtatttgtcaaggcttccatttggcatataatcatacactaagagaagttcaccttttcgccggcaatatcccagtaactgcacaagattgcggtgttgaaggcaaccaatactaacaatctctgcaataaattctttcatgccttgggttgagtcatgtgacacccttttcacagctatatccaatctagatatagggagcacccccttatacacacttccaaaccctcctgtacctagtaggtgcttatttttgaatccttctgtggcatcaaacaaatccttgtaacagaacctccgtggcccatactcgacttcccaatcttcgcgtagctcagcatatcttagattcctccgcatgcacagaaaaatggtagtgcccgcagagaggaggaacaccacagctactattggcaaaattgtctgcaataccttggaccgagccttttaacctagacgaggaagcttggcaatgtcaattgatggagccgggctgttcatgccgaagctccaacctagcacatagtgttttccactgactgttcctgttgaagatgagaagccaatatatgccgagtcagtgagcactgttgatagattgtaggtagtagaaagcagtggcttcacaggtttttccacattgaggggggccatggtcacattgatctgtgtgatttctctatcatagtttacccaaacttgcatcgccttctggctaatgagtgtcaaattcttaaagtcaccactcttatcatcgtaaaagccagcatcacgagatttcatggagtaaagactgttgatattgatgccaatgtggttattactgatgtcttgtaagtcatcattttggacagtatcgagctcgatagcaaagatgtggttgtttgggtctccattgttcttgttgttgaaaaggcccaaatactgggtccagaacgcacttgcgaaattcttgcttggagcaatgaagaaggcgaggccatgcccacatgaatcagggtagtcacagaggatagcaaacacaaacgatatggagaaggactgcaccgttccattaggcgactcgtggagatgcagtggagtcggatggaaggcatggcctttcagccgaaccatgccattggtcagctccaggaggccgcttggcgtgactctggctccaccatcaagggtgaggttgctgccggtgaaaccggagtagacaaattggtcaacagcatcactgcaccctgcaagaactgctagcaggccgaacagcataatcttcatgctaggcttttcttctacttgcatattatggatcatgcagtgtggtttgcagtgccacactaacatgcattctcaatttaatctggatctaggctatttataattagttatggcttgcttgtccaaatcctctgcatacttttcctagcctccttcctgtttgtttcctacatgcctacaccaaagtatgcatcaagcaataaatgctgaaaatgacatgcttatttgaattaataatggaaaatatatttatttgtctgggccactaagaaacaaattaaggtgcatgagattatacatctgtacttgtttgacgtatgaatgaccagagggttagttctagactgctaggttgctacataattttggctttgtttacatctgacaataaatttgacgctgaccatattgaagctcctataaaattctagcagacatcacatcatttgtttattaaacatttctttcaatcacgtaatttttcattggtgcctactaatagtcaacccactcctttggtcatagtatagcagctaacaagtggtatgaacaaaacattggccaatgggatatctcaacagtctgaatattaatacagaagctatatttttctgaacttggaggcggcatccttgactgggaatcaagtttcaacccagtgatgtaagtagcaaaggtatgttgtctgacaaattcccagtgcattgatgactttgcatggtctgccttgtcttctctggacaaacagaaagtgacatcattttctttgcacacagaccaactagtgatctgtcgaagctatccttcttgggctgtgttttcccctcttgttgagaatgccatttgttctggtggaagtctgcaagcttggtgtttcatgctggtgtcaggatgacatatggacattctgaaataaaatgaagtctctgaattccacctttgttctgaacttctgatattagattgacagaagttggtgttaaattttcagcctgttcttttttccttccaactttcagggattggtgtagctatattccttgaggaatcttgaatctgtctttgaaggcttgaagctgtgtaagactgcattgtcgattcggcaaacttctgggcccttggtctttgaatctgtcttgaggaatcgctgatctgcaactacctgggtccatgatggatgtgtagagagaagcagtgtcggtcgatctgggctgagcctgcttcaatgttttaattggcttcttttttccagacagacatcaattgcagtgacaggtaacaactcaagtaaatatttcagtttttgctgacaatggaagtcacgactttacatgctacccactgatgactgatccacatagctttgcagttcacaaacctccatctatattcaccatagaatcaatccaatcacagtaacttgcacagatttacagttaatcaaaatacactgcacttctacaagtaaggtaaatctaatgatactacaacaaaggacattttataattgcctgtcatttgcctaagcaggcaagcacttgaaagttctaacaaatgcattatgtgcaggtctcatcttccagacaagatgtctggtgtcattgtgcccaagctattccctgaccacgggtactgtgcgacgtatgggtcgaccccttcattgtgcattattgccagcaagctggagttcagggttgccggtgtaaactccggcagcggtgcatctccatcaaggtattgcatgacctgccgcatgataggccttgctccgggtattgggtgtgagcacatcagcccaagtgtcaacaccaggcatgcctcatcgacgttgtagatgccgtgcagcttcgggtccactgtctctggcagcgaaccctggtgccagtgctggagaacccagtcaaccaacatctttcggccgtggtgcgcactgttgctgatcggccaccggccacaggtgacctcaagaaggaacgtgccgaaggcgaacacgtcggtgagaggggatgcctttcctgtgcgtgccagctctggggctatgaatcccatggttccaaccaggtgcgtggtctgtgggttggtgccatgttcatataatcttgcaagaccaaagtcgcctaaccgggcattcatttcactatccaggagcacgttgcttgctttgatgtcacggtggatgacaaccttgtcccacttctcatggaggtagaataagccagaagccacgtctttgatgatttgcatcctctgagcccaatttaaaacaggtttgttgtcttcaccatatagatacttgtcaaggctaccatttggcatatagtcatacactagtaggagttcgccctttcgtcgacaataaccaagtagctgcacaaggttgcggtgccgaaggtgaccaatgctaacaacctcagagataaactctttcatcccttggtttgaaccatgtgatacctttttcacagcaacctcaagtttggatgtccgaagcactcctttgtacacttttccgaaccctcccacgccgagtatgtgcttactcttgaaaccttctgtggcattgaacagatccttgtatgagaaccggtgtggcccgaactcgacctcccaatcttcccttaattccgcatatctctgctgcctcctcacaagtatcatgactacaatgaagatcaatgctacagcgacaattggcaataggatctgcaagatcttctgcaacctattatctccagggcaagggagcctcggcaacctggagatttcaataggcggagcaggagcattcatagcgaagctccatccaagcacgtagtaatgtgaggtgagcggacctgttgctgccgagaagccaatgtatgcttggtcagtgagcactgtggataggttgaaggggactgagagcagtggccgtgtaggtttggtcactttgatgggagccaaagtgacattgatctgtgtggtctctccatcgtagtccacccacacttggaccggcttgcagttgctgcccgtgagggtcaggttcttcaagagcccaccatgctggtcattgtagaagccgatgtgttgggatttcttggagtggaggctgttgatgtcgatgccgacgtggtagccatcgatatcgtccaactcggtgttctgggcggtgtcgatttccacggcgaacatgtggttgcttgtgctgttgtcgctgctgatgttgaggaggcccaagaactgcgccgccttggcatcggggaagcccttgtttggggcgacgacgaaggccatgccgtcggtgctcgcatcggagtacggggagatgatgccgaacatgaaggccacggagaaggattggactatgccattcgattgcttcttgaaccggagcggagttgggtagaatgcgtggccttggatattgggcatgctgtctgtcagctgaaggagccctgtggtggtgaccatggctgagccatcgagggtgaggttggctgcgccggtgctggcaaagccggagtagacaaagctctcttcgccggagctggcgcagaagggcccaagaaagctaacatagaggataaaaacagcactgaagagcacaggctgattctccatgtgtagcttgtgaagaaccaaagaattgagatgccaaaaggtacaaaggtgtttaggacttggctgtaccgggagcagtccaggtttcactcttatcatatatgaagctaaactgcacgaatcttctgcatagtcttcaattcctttcctgtccttgtctgaaagtgatacagccaggctaacatgcaaactaccaagttgttcttttgtttgctcggtcaaacatctcactatctcagagcttatcctcattttaacccaagttttacttttctttgaaattgacctcaagtttgttccttacaaaattttctctaacttctgataaaatgcagacaccaggtaattgtggtcagtaaaataaggaccggctgacttacaattagctagggaacaaaatgatcagaccgattttctccttccatacgctcatttgcgggaaaaaaaaatgatcagacagagaccaaaagttgccttaaagctagcccctatccaaaatcatttaaaagaaatgctcaaattttgttaaatttacctgtccattgcatatataattgatagtttgatttggacttcatgcataaattccttgttgaaaaaggacatggtatgaggtgtacatgttgatcactactggggatatgaattgacaaggaaattatataatatcatggtagaggccaataagccaatatctagagatttggtatgagttcgaagaaaatgcccttaagactttctgaatacaactaaccatccttagcaagctcaactattctttttcttgacttaatccataactaagtcttgtaacacgtgcttatacactatttcacgttagaagttaataatgcattcttaagcatgcttggacttatatatggaagggtcatgatctgacaggatacagcatgtcaagttttgaccgtacatatttacaatgtttccttgcaagaaaaatagtataagaaatattactatattagcaatttgaagcactgatacaaaggtacaaatactgcaatttgatatggtcattgaaggtctatgatctaaagttcaaagatgtaaccgatcaatagttcatttggcagtagattatacaaccccaatttttaatagatgatgccaataacttttgaacacatgtttcaccatttgtcttgttcaaaatatttacctaattaccatttattttgttatgagttgttttatcactaaaagtgtactttaagcataacttatatcttatgcatttgcacaaaatttttgaataagacaatgatcaaacgtgtgtccaaaaatcaacgacatcatctattaaaaacggagggagtacaatggttagctaataatagtcgatttggtgtgaaatgctgtgctttgactcaatgttcgtcatcgtttctacagttggtttcttgtctccaccgacagtgactcatgttttgctaaaatgctgatagtggaccattctaataccattttcttttgtaaaaagatgccacgaataactacacaaatatggactatggccaactgggcttgcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0130500, RefSeq:Os07g0130500