Os07g0133100

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Revision as of 08:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0133100| Description = Legume lectin, beta domain containing protein| Version = NM_001188114.1 GI:297725358 GeneID:9268564| Length = 2285 b...")
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Gene Name

Os07g0133100

Description

Legume lectin, beta domain containing protein

Version

NM_001188114.1 GI:297725358 GeneID:9268564

Length

2285 bp

Definition

Oryza sativa Japonica Group Os07g0133100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:1785943..1788227

Sequence Coding Region

1786009..1788048

Expression

GEO Profiles:Os07g0133100

Genome Context

<gbrowseImage1> name=NC_008400:1785943..1788227 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:1785943..1788227 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccagtctcgtcttgctcttgatgatgaatttcgtgatgatggtaattgccacctttcctgaattcacatacaacggattcagcggcgccaggaacctcctcctcgacggcgccgcttccgtgggagaagatgggatcctctccctgacgaatggcagcagcggcgcccagcagcaggggcgctgcttctatccctaccctattcccctgcagtacaccggtggtgagacccgctccttcacctccaccttcgtcttcgccgtcacatgctccggctccggcagctgcggggatgggatgacatttgtcatctcctcgaccgccgacttcccggccgcctcttcgccggcgtacctgggccttgccaacccgcacgatgcatcgtcaaaccctttcgtcgccatagagctcgacaccgtcgcagacccggacgcgacgaacggcaaccatgtcgccattgatttcaacagcctgacgtccaacttgtctagacctgcagggtacatctacgacgacgaaggagccgtcggcaactctagctttcaggcgctcaagctttccagcggcgacccgatgcaggcgtgggtgagctacgacgccggagcagcccggctcgacgtcacgcttgcgctcgtccccatgttcatgccctccgtgccgctactgtcttacaacgtcagcctctcgcgattgctgtcggcggccgacgattctcccatggcgaccaaagcatatttcggcttcaccgcttcgacgggtggtgatcccggtggcgctggcgccacccatcaagttcttggctggagctttagcaacggtggattgccactcgactactcgctgctgcccctgaaacgagctcatcagggtcaggattatagcagaagtagacgagccaacaggaagagcttcgtcacatggttgcctgcagctgcatcagtgctcgccgtgcttgcagccatggcagcgtgtcttgtgctccggtggtgctggaagaagaacgcccggagtcgggaaaactgggaagcagagctgggacctcgccgcttcgcttaccgagacctccgccgcgccaccgacgggttcaagcatctgctggggaagggtggctttggccgcgtctacggaggcgttctctccgcgtccggcatgcccatcgccgtcaagcgtgtctcgtctgagtccaggcatggtatgacgcaattcacggccgagatcatcatcctcggccgcctccgccaccgcaacctcgttcgcctcctcggctactgccgccacaaggaggagctgctgctggtctacgagcacatgcccaacggcagcctagataagtacttgcacgagcacacgtactccagcaactgcaggacgctgggttggcctcagaggcttcacgtcatcaagtgcgtcgcggcggggctgctctacctgcacgacgactgggagcaggtcatcgtccaccgcgacgtcaaggccagcaacgtgctcctcgacgccgacatgaacggccgcctgggcgacttcggcctcgcgcggctgcacgaccacggcgccgacgcgcacaccacccacgtcgccggcaccaggggctacctcgccccggagctcaccaggttcggcaaggccaccaaggccaccgacgtgttcgcgttcggcgccttcgtcctcgaggtggcgtgcgggcgccggccgatggggcacaacgcccgcggcgagctgctcgtgctcgtcgagtgggtgcgcgacgcgtgggcggcgggcggcggcggctccgtcgtcgacaccatggacccgaggctggaggagtactccggcgaggaggcggagctggtgctcaagctcgggctgctctgctcgcacccgctccccgccgcgaggcccggtatgcgcctcgtcatgcagtacctcgacggcgacgtgccgctgccggagttctcgccggattatctctgcatcaaagacgtcgaccaggtccaagttggagactactctccctcggtggtcaccacgatcacaggtctgtccggaggaagatga</cdnaseq>

Protein Sequence

<aaseq>MPSLVLLLMMNFVMMVIATFPEFTYNGFSGARNLLLDGAASVGE DGILSLTNGSSGAQQQGRCFYPYPIPLQYTGGETRSFTSTFVFAVTCSGSGSCGDGMT FVISSTADFPAASSPAYLGLANPHDASSNPFVAIELDTVADPDATNGNHVAIDFNSLT SNLSRPAGYIYDDEGAVGNSSFQALKLSSGDPMQAWVSYDAGAARLDVTLALVPMFMP SVPLLSYNVSLSRLLSAADDSPMATKAYFGFTASTGGDPGGAGATHQVLGWSFSNGGL PLDYSLLPLKRAHQGQDYSRSRRANRKSFVTWLPAAASVLAVLAAMAACLVLRWCWKK NARSRENWEAELGPRRFAYRDLRRATDGFKHLLGKGGFGRVYGGVLSASGMPIAVKRV SSESRHGMTQFTAEIIILGRLRHRNLVRLLGYCRHKEELLLVYEHMPNGSLDKYLHEH TYSSNCRTLGWPQRLHVIKCVAAGLLYLHDDWEQVIVHRDVKASNVLLDADMNGRLGD FGLARLHDHGADAHTTHVAGTRGYLAPELTRFGKATKATDVFAFGAFVLEVACGRRPM GHNARGELLVLVEWVRDAWAAGGGGSVVDTMDPRLEEYSGEEAELVLKLGLLCSHPLP AARPGMRLVMQYLDGDVPLPEFSPDYLCIKDVDQVQVGDYSPSVVTTITGLSGGR</aaseq>

Gene Sequence

<dnaseqindica>67..2106#gtgcactagaaagttaagtttcaagatccagcaataacagaattaaggcaaggctgcagcaccaccatgcccagtctcgtcttgctcttgatgatgaatttcgtgatgatggtaattgccacctttcctgaattcacatacaacggattcagcggcgccaggaacctcctcctcgacggcgccgcttccgtgggagaagatgggatcctctccctgacgaatggcagcagcggcgcccagcagcaggggcgctgcttctatccctaccctattcccctgcagtacaccggtggtgagacccgctccttcacctccaccttcgtcttcgccgtcacatgctccggctccggcagctgcggggatgggatgacatttgtcatctcctcgaccgccgacttcccggccgcctcttcgccggcgtacctgggccttgccaacccgcacgatgcatcgtcaaaccctttcgtcgccatagagctcgacaccgtcgcagacccggacgcgacgaacggcaaccatgtcgccattgatttcaacagcctgacgtccaacttgtctagacctgcagggtacatctacgacgacgaaggagccgtcggcaactctagctttcaggcgctcaagctttccagcggcgacccgatgcaggcgtgggtgagctacgacgccggagcagcccggctcgacgtcacgcttgcgctcgtccccatgttcatgccctccgtgccgctactgtcttacaacgtcagcctctcgcgattgctgtcggcggccgacgattctcccatggcgaccaaagcatatttcggcttcaccgcttcgacgggtggtgatcccggtggcgctggcgccacccatcaagttcttggctggagctttagcaacggtggattgccactcgactactcgctgctgcccctgaaacgagctcatcagggtcaggattatagcagaagtagacgagccaacaggaagagcttcgtcacatggttgcctgcagctgcatcagtgctcgccgtgcttgcagccatggcagcgtgtcttgtgctccggtggtgctggaagaagaacgcccggagtcgggaaaactgggaagcagagctgggacctcgccgcttcgcttaccgagacctccgccgcgccaccgacgggttcaagcatctgctggggaagggtggctttggccgcgtctacggaggcgttctctccgcgtccggcatgcccatcgccgtcaagcgtgtctcgtctgagtccaggcatggtatgacgcaattcacggccgagatcatcatcctcggccgcctccgccaccgcaacctcgttcgcctcctcggctactgccgccacaaggaggagctgctgctggtctacgagcacatgcccaacggcagcctagataagtacttgcacgagcacacgtactccagcaactgcaggacgctgggttggcctcagaggcttcacgtcatcaagtgcgtcgcggcggggctgctctacctgcacgacgactgggagcaggtcatcgtccaccgcgacgtcaaggccagcaacgtgctcctcgacgccgacatgaacggccgcctgggcgacttcggcctcgcgcggctgcacgaccacggcgccgacgcgcacaccacccacgtcgccggcaccaggggctacctcgccccggagctcaccaggttcggcaaggccaccaaggccaccgacgtgttcgcgttcggcgccttcgtcctcgaggtggcgtgcgggcgccggccgatggggcacaacgcccgcggcgagctgctcgtgctcgtcgagtgggtgcgcgacgcgtgggcggcgggcggcggcggctccgtcgtcgacaccatggacccgaggctggaggagtactccggcgaggaggcggagctggtgctcaagctcgggctgctctgctcgcacccgctccccgccgcgaggcccggtatgcgcctcgtcatgcagtacctcgacggcgacgtgccgctgccggagttctcgccggattatctctgcatcaaagacgtcgaccaggtccaagttggagactactctccctcggtggtcaccacgatcacaggtctgtccggaggaagatgacggccaatttaggcgccaccatgcctcatccttgaccacgctacatacttacatagtaggcaaaagtaatgcatggttcctaaaggtgagatggatgggtagctagtaagttttcttcttcgtttgtgttcaaatgttctttaaagttgttggatttcttacatgagatttgcttcggt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0133100, RefSeq:Os07g0133100