BGIOSGA006609

From RiceWiki
Revision as of 18:41, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA006609

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006609, complete gene.

LocusTag

OsI_06920

Ensembl Transcript ID

BGIOSGA006609-TA

Ensembl Protein ID

BGIOSGA006609-PA

Length

1763

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:13107636..13109398

Sequence Coding Region

13109166..13109398,13108632..13108829,13108501..13108561,13107636..13108397

Genome Context

<gbrowseImage1> name=IndicaChromosome02:13107636..13109398 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:13107636..13109398 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAATCCGACGGAATCGAAGAAGCGTCGATCCAAATCCAATCAGGCTGCCGGTGAACCGACCGCCCTTGATCCAGATGCCGCTAGTGTTGTGGGAGCCGATGGTGCTCCAGATGCTACTGCTGTTGCTTGTGGTGCTCTACGAGCTAGTGCTCCAGGCGCTGGCTTTCCTACCGCAGGTGCTCATGCCGCCAGTCCGTGGTGGCAAGAATCATCTCCTGATAGCTCGGAATGGATGTATCCACCAGGTGGTTTCCTGAATTATTTACAGAATAATAAGATCTCTCCATTTAGCCAGACACATCCATTTGTGAACTATCATAATGCAAGTAAGCTTCCAGAAAATTTCCACTTTGTTGGTGCACCAATTAGTTATTCTACAATGTCACATACAATTCCATGTTCTAAAGCGATACCGTCACCAACTGGGAGCCTTTCCGATGCTAGGTCCGAGAAGCGATTGAATTGGTCAAATGAAGAAGACATTAGATTGGCTAGTGCTTGGCTGCACAATTCAATTGACTCGATTGATGGAAATGATAAGAAGTCAAATCAATATTGGTTAGATGTTACTGCTACATACAACAACACCACTAAGAGTAACTGTATGAGAAATTGTAATCAGTTGAAGCAACGTTGGGAGCGCATTAAGAAACCAGTCTCCGAATTCAATGGTTTTTATGCAAGAATCACTAAAATACATCAAAGTGGTATGAGTGAAGACCAAAAGATGGACCAAGCATTCCAGCTATATGCCTCTGAACATAATGACAAGCGTTTCACAATGGTGCATGTAGGGAGGATATTACGACATGAGAAAAAGTGGTCTACATATTTGAAGAAAATTAAGAAGGAAAAGGACAAGAGTGTAACTCCTAACCCAACTCATGTTGTGAATGTCAAAGATGCTCCAAAACAACGTCCTATTGGGCATAAGAAGGCCAAAGATGATTGCAGTGGAAAGCGTCTGACATCAGACGCTATTTCTGTTATTGACCAGAAACTAGATAAATTCATTGAAGCAAGCAGCAATGCTGAGAAGATGGGAGAGGTACAACAAAGTTTGGCAAATAAGAAGCTAGAAGTAGCCAACCTTAATCATAAAGCAGCTCAGGAACAAACAATGGGTAAAATGATTGACCTTTACAAAGACTTACTGCTAGCTCCCACAAGTGATCTTAGTGAAGAAGCTTTGGCTGAGAGATCCAAAGCATTGGAGTGTATGAGATTGGCTTTGTTTGCTAAAGATAATTGA</cdnaseq>

Protein Sequence

<aaseq>MNPTESKKRRSKSNQAAGEPTALDPDAASVVGADGAPDATAVACGALRASAPGAGFPTAGAHAASPWWQESSPDSSEWMYPPGGFLNYLQNNKISPFSQTHPFVNYHNASKLPENFHFVGAPISYSTMSHTIPCSKAIPSPTGSLSDARSEKRLNWSNEEDIRLASAWLHNSIDSIDGNDKKSNQYWLDVTATYNNTTKSNCMRNCNQLKQRWERIKKPVSEFNGFYARITKIHQSGMSEDQKMDQAFQLYASEHNDKRFTMVHVGRILRHEKKWSTYLKKIKKEKDKSVTPNPTHVVNVKDAPKQRPIGHKKAKDDCSGKRLTSDAISVIDQKLDKFIEASSNAEKMGEVQQSLANKKLEVANLNHKAAQEQTMGKMIDLYKDLLLAPTSDLSEEALAERSKALECMRLALFAKDN</aaseq>

Gene Sequence

<dnaseqindica>1..233#570..767#838..898#1002..1763#ATGAATCCGACGGAATCGAAGAAGCGTCGATCCAAATCCAATCAGGCTGCCGGTGAACCGACCGCCCTTGATCCAGATGCCGCTAGTGTTGTGGGAGCCGATGGTGCTCCAGATGCTACTGCTGTTGCTTGTGGTGCTCTACGAGCTAGTGCTCCAGGCGCTGGCTTTCCTACCGCAGGTGCTCATGCCGCCAGTCCGTGGTGGCAAGAATCATCTCCTGATAGCTCGGAATGGTATGGTGCAAATTTTTGAGTACAAAGATTTAGGTTAATCAATGTTATTGGTGAATTAATGGGTTATATTAGACTGACAACTTTTTGCTTCAAAGAATTGCTAATATATTGTTGTATAGCTGGCACTTTTTTGCTTGAAAGAATTTTTCGCTAGCCTTGGTGGTAAGATGTATAGCTGGTACTGCTAATTACTTGTATTCACCTGATTAATCTTAGTCAAGCTCATATATGCTAGTTTATGGGGACTGATTTTTTTCTGAAATATATTGCGCTTGTATTTCACCACTTCTGTTCTTGTCACAGATATCATAATTTTTTTGTTGTTTTCTTTTTTAGGATGTATCCACCAGGTGGTTTCCTGAATTATTTACAGAATAATAAGATCTCTCCATTTAGCCAGACACATCCATTTGTGAACTATCATAATGCAAGTAAGCTTCCAGAAAATTTCCACTTTGTTGGTGCACCAATTAGTTATTCTACAATGTCACATACAATTCCATGTTCTAAAGCGATACCGTCACCAACTGGGAGGTGTGCTGCAGCACAAATAGGTTCACAAGATAAAGAAACAATTGATATTGAGGACGATGACACCATTTAGCCTTTCCGATGCTAGGTCCGAGAAGCGATTGAATTGGTCAAATGAAGAAGACATTAGATTGGTATGTTAATTTTCTTTGTTTCTTTTTAAAGATTTGAGTCTGTATGCTTTTAATTTTATTTGCACTTCATTAAAGGTACGGTTTATTCTTCTCCTAATTGTAGGCTAGTGCTTGGCTGCACAATTCAATTGACTCGATTGATGGAAATGATAAGAAGTCAAATCAATATTGGTTAGATGTTACTGCTACATACAACAACACCACTAAGAGTAACTGTATGAGAAATTGTAATCAGTTGAAGCAACGTTGGGAGCGCATTAAGAAACCAGTCTCCGAATTCAATGGTTTTTATGCAAGAATCACTAAAATACATCAAAGTGGTATGAGTGAAGACCAAAAGATGGACCAAGCATTCCAGCTATATGCCTCTGAACATAATGACAAGCGTTTCACAATGGTGCATGTAGGGAGGATATTACGACATGAGAAAAAGTGGTCTACATATTTGAAGAAAATTAAGAAGGAAAAGGACAAGAGTGTAACTCCTAACCCAACTCATGTTGTGAATGTCAAAGATGCTCCAAAACAACGTCCTATTGGGCATAAGAAGGCCAAAGATGATTGCAGTGGAAAGCGTCTGACATCAGACGCTATTTCTGTTATTGACCAGAAACTAGATAAATTCATTGAAGCAAGCAGCAATGCTGAGAAGATGGGAGAGGTACAACAAAGTTTGGCAAATAAGAAGCTAGAAGTAGCCAACCTTAATCATAAAGCAGCTCAGGAACAAACAATGGGTAAAATGATTGACCTTTACAAAGACTTACTGCTAGCTCCCACAAGTGATCTTAGTGAAGAAGCTTTGGCTGAGAGATCCAAAGCATTGGAGTGTATGAGATTGGCTTTGTTTGCTAAAGATAATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006609