Os07g0134800

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Revision as of 08:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0134800| Description = Similar to Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial (EC 1.3.5.1) (FP) (Flavoprotein su...")
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Gene Name

Os07g0134800

Description

Similar to Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II)

Version

NM_001065380.1 GI:115470492 GeneID:4342350

Length

5914 bp

Definition

Oryza sativa Japonica Group Os07g0134800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:1892767..1898680

Sequence Coding Region

1893079..1893181,1893455..1893492,1893586..1893706,1893800..1893869,1894231..1894401
,1894485..1894659,1894746..1894933,1895023..1895166,1895316..1895379
,1895464..1895556,1895649..1895734,1896434..1896574,1896658..1896804
,1896970..1897057,1898080..1898235,1898470..1898577

Expression

GEO Profiles:Os07g0134800

Genome Context

<gbrowseImage1> name=NC_008400:1892767..1898680 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:1892767..1898680 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggcgcggctgcgtctcgcgtggcctcaggagcctctccaagggcaagggctcctcctcctccgcccccgtctccgccgccgctaggctcttctccaccgcctcgtcgtcgtacacggtggtggatcactcgtatgacgcggtcgtggtgggagccggcggcgcggggctccgtgcggcgatcgggctctccgagcacgggttcaacacggcttgcatcaccaagctcttccccacgcggtcgcacaccgtcgcggcgcagggtggcataaatgctgctcttggaaacatgacggaagatgactggagatggcatatgtatgacactgtcaagggtagtgattggcttggtgaccaggattctattcagtatatgtgcagagaagcaccaaaagcagttatagaacttgaaaactatgggttgccattttcaagaactgaagatggaaagatataccaacgggcctttggaggccagagcttagattttgggaaaggtgggcaggcctatcgatgtgcatgtgctgctgacagaacaggacatgctatgttacacactctgtatggtcaagcaatgaagcataatactcagttctttgtagaatattttgcgctagaccttatcatggacagtgaaggcacctgtcagggggttattgctttgaacatggaggatggcactcttcaccgtttccgtgctacaaatacaattctggccacaggaggttatggcagagcctacttctcagcaacctcagctcacacatgcactggagatggcaacgctatggttgcacgtgctggtttaccacttcaggaccttgagtttgtgcagttccatcctacaggcatttatggtgctggatgccttatcactgaaggttcccgtggtgaaggtggtatccttaggaacagtgaaggcgagcgtttcatggaacgatatgctcctactgcaaaagatcttgcttctcgagatgttgtttcaagatctatgacaatggaaatcagagaaggccgtggtgttgggccattgaaggaccacatctatctgcatcttaaccatctgcctccagaagttcttaaggagaggcttcctggtatttctgaaactgctgctatttttgctggtgttgatgtcaccaaggagcccattcctgtcttgcctactgtgcactataatatgggtgggatcccaacaaattaccatggagaggtagtgactatgaagggtgacaatcctgattctgttgttcctggtttgatggctgcgggagaagcagcatgtgcatctgttcatggtgcaaatcgtctgggtgcaaattcacttcttgacatagttgtttttggcagagcttgtgcaaacagggtagctgaaaccgctaagccaggtgagaagcagaaacctcttcaaaaaagtgctggagaaaagaccatagcctggttagacaagctgagaaatgcaaatggatcattgccaacttccaagatccgtctaaacatgcaacgtgttatgcaaaataatgctgctgtcttccgtacgcaagaaacactcgaggaaggttgcaaattgattaccaaggcatgggaaagttatcatgatgtgaagatcagtgaccggagtctcatatggaattcagatttgatagagaccattgagttggaaaatctcttgataaatgcatgcataaccatgcactcagcagaggctcggaaggaaagcagaggagctcatgctcgtgaagatttcacgaaaagagatgatgagcaatggatgaagcactcgctggggtactgggagaatgagaaggttcgcttggcatacaggccagtccacatgaacacattggacagtgaagttgagtcgttcccacccaaggcgcgtgtttattag</cdnaseq>

Protein Sequence

<aaseq>MWRGCVSRGLRSLSKGKGSSSSAPVSAAARLFSTASSSYTVVDH SYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDD WRWHMYDTVKGSDWLGDQDSIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQ SLDFGKGGQAYRCACAADRTGHAMLHTLYGQAMKHNTQFFVEYFALDLIMDSEGTCQG VIALNMEDGTLHRFRATNTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLE FVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTM EIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVH YNMGGIPTNYHGEVVTMKGDNPDSVVPGLMAAGEAACASVHGANRLGANSLLDIVVFG RACANRVAETAKPGEKQKPLQKSAGEKTIAWLDKLRNANGSLPTSKIRLNMQRVMQNN AAVFRTQETLEEGCKLITKAWESYHDVKISDRSLIWNSDLIETIELENLLINACITMH SAEARKESRGAHAREDFTKRDDEQWMKHSLGYWENEKVRLAYRPVHMNTLDSEVESFP PKARVY</aaseq>

Gene Sequence

<dnaseqindica>5500..5602#5189..5226#4975..5095#4812..4881#4280..4450#4022..4196#3748..3935#3515..3658#3302..3365#3125..3217#2947..3032#2107..2247#1877..2023#1624..1711#446..601#104..211#gtcttccgcgccgccctctccctcctccaccgcctccgcctccgccttctctcgtgccgccgatctccatcgccggcgtgcggtgcaccgagatccacccgagatgtggcgcggctgcgtctcgcgtggcctcaggagcctctccaagggcaagggctcctcctcctccgcccccgtctccgccgccgctaggctcttctccaccgcctcggtagtcccctcgatcccccgacctcagttgatccgcgcgactgtgtgttcggattgttttgggtgggattcgatgagctctattttgggatgggatttatttatttatttatattttttttggctgcttgtggtggtggtggtgtgggagtttgatttgtgatgcgatgagagggtttggttcgagaaatgggcggcgattgatggtattggttttttatttgttgatgtgcagtcgtcgtacacggtggtggatcactcgtatgacgcggtcgtggtgggagccggcggcgcggggctccgtgcggcgatcgggctctccgagcacgggttcaacacggcttgcatcaccaagctcttccccacgcggtcgcacaccgtcgcggcgcaggtactgtgaaaaacttgctgcaacacctttacttaggcttgcatttagtgacaatagatttgttgtgcatcatgcaaacattggttgggtattgtgggaactgagatgctggttgtgatgtgctttcattgtgtttacgatgatttatgttggatggttagttttagaattagtttgatgtgatgctttatgtccatttgtgatttatgtgctaagtaatttccatctgtttaggttcatttgtcctatggtatgctttttgtgtactgcgcagtacgctaaccaaatcagtacaaatgagataaatatggttaggtagtagctaaagtactagggccagtttgagcatagctccctttcatcagggaattcactgcacaccaatggtcaacagaaaaaaatgctttgtcaacagaaaaggccagttattttattgcatctgctcttgatattagcactcagtgaatggacgtgtcactaagacggtgtgttttataatcaacaatcattttaaaggaataaatacagtgtcctggacttttagtcctgccattcttggttgtctgttctaaactttctatgtatttaagataattttgaagagcagttgttctgtttctctggcctttaagtcagatatgcatttcacagtggattgttatgcagatctgatgtattccttgacttgcgatattactgttaccgatatcgaagctatacatataaatttttaattgattaatgcctatattactgtcctacctagttattttgtgtgttttgcatgtttgaatcttttttgtgcctctttattttttatactttttgttgatatgagtcattcagcaacagttgtttttggtatgtctaaatgcctaggttaacatctaaacttttcaattttgttggttgatgtattttgctccattgatgttcatcattagagccttctcttacttcttttattgttctggtatgtttatgagcttcattcacgtactaatttacaagagtgtatgtagggtggcataaatgctgctcttggaaacatgacggaagatgactggagatggcatatgtatgacactgtcaagggtagtgattggcttggtaagctgccttaattcctggttcccttttttacttcttttaggctgcaaaacacctagaggttataataaagagttactaacatggaatggcatcttatatcaactaccctactgttctacagtttcactctctttctaacattttgttcttatccatttccaggtgaccaggattctattcagtatatgtgcagagaagcaccaaaagcagttatagaacttgaaaactatgggttgccattttcaagaactgaagatggaaagatataccaacgggcctttggaggccagagcttagattttgggaaaggtcgtagctttctaaatttattttgaaaagacaatcttgacatatattattccagtccctataactgtgtgtgctttcttcaggtgggcaggcctatcgatgtgcatgtgctgctgacagaacaggacatgctatgttacacactctgtatggtcaagcaatgaagcataatactcagttctttgtagaatattttgcgctagaccttatcatggacagtgaaggtaagacggctagttttttagataatcatatccgtcaaccctgtgtctacgtagtctatgcaagactcaagtgtatgatagaagacttttctaattactatctgtgtcataaactcctagttgtaatccatcattgctaaattggtttcttttgataattatttgagtaaattgcactttgcaccgggtagagcgtaacttgtttcactttacactgggtttaacacatactttcactttataccagggtatctcaattcgatttcactttgcacttggttatgtcttataattgaacaaaatattgtaaaatatgaggatatcttataaaacttattcaatcttgataggtaagattatgtatcctagtgctaagtgaaacttatttcaatacaaccttagtgtaaaggaaagtatgtgctaaatctggtgcaaagcgaaacaaatgttttatccggtgctaagtgcagtttactctaattattttgttccttgtgtgcgtgtgtgtgtgtgtggctatttcaagcataacacaagtacacttggcactgtagcttcctcttcagtagttgcaaatatctcattcatatccttgtatttaccctcctgcttcttgtattaggacttgtgaattttattcaagcagtcgattactccatgccatagaagctctattgattactttgtaataatattcaggcacctgtcagggggttattgctttgaacatggaggatggcactcttcaccgtttccgtgctacaaatacaattctggccacaggagtaagatatctcacagatttgaattttggatgacaaatgtgctagctttcttgactatggcgattcatttttgtgttgtcttgtggaaacagggttatggcagagcctacttctcagcaacctcagctcacacatgcactggagatggcaacgctatggttgcacgtgctggtttaccacttcaggttagtccaattatttagtgctgaattgttagttactgttccatgcttctatcctgattacatttgcatgatatatgtttgcaggaccttgagtttgtgcagttccatcctacaggcatttatggtgctggatgccttatcactgaaggttctatactcctcttttcttcatgtgcttagcttctaaggacttctcttgtttatcctagtttatgggcaggacatttatactgttgatgttgcacatatgtaattttactgacaatcttcgtgtcttcattctcatttgatcatcaggttcccgtggtgaaggtggtatccttaggaacagtgaaggcgagcgtttcatggaacgatatgctcctactgcaaaagatcttgcttctcgagatgttgtttcaagatctatgacaatggaaatcagagaaggccgtggtgttggtatgcccaagtccattcatttaacacctgaggtacagaactgtgttggctgttgggatgaaacttatcttttgttctggttacttcagggccattgaaggaccacatctatctgcatcttaaccatctgcctccagaagttcttaaggagaggcttcctggtatttctgaaactgctgctatttttgctggtgttgatgtcaccaaggagcccattcctgtcttgcctactgtgcactataatatgggtgggatcccaacaaattaccatggagaggtttgtgttgagtaaccaataaacattactgtagatcacttttttcttgctgatttttaatagaagttttctattctgcatatcaggtagtgactatgaagggtgacaatcctgattctgttgttcctggtttgatggctgcgggagaagcagcatgtgcatctgttcatggtgcaaatcgtctgggtgcaaattcacttcttgacatagttgtttttggcagagcttgtgcaaacagggtagctgaaaccgctaagccaggtaggtttccctcctgtgctacataacttgttggctgatttgctcatcctgatgcacctaatgtctgtgatgcaacattataggtgagaagcagaaacctcttcaaaaaagtgctggagaaaagaccatagcctggttagacaagctgagaaatgcaaatggatcattgccaacttccaagatccgtctaaacatgcaacgtgttatgcaaaataatgctgctgtcttccgtacgcaagaaacactcgaggaaggtaatgcagttttgcacatatcctttgtagcttaaggcaatgacgctggtgatatagaaatgtctgttgtcaccatagatcatcctagtcattaacaataggaagcaaggaaggcaggatttaacagtaaagatagaccccagtagaaagtcatgattcttgactgttgtatcaatgtgttctcacagacctttattaggttgttagctgattagcaaagtatagtaaaggtaccataataccaagaattagtgattgaagcttcataattagctagtaatcaagcatggcataaatagttaagataacaagagacatgattcataaatatttcccactgacctcgaccttgctttattaggttgcaaattgattaccaaggcatgggaaagttatcatgatgtgaagatcagtgaccggagtctcatatggtatgccatttcttgcaaggattgcaccgacttattttgcttgcttgttactatcttacactggctatctataattcactatttgtttcacaggaattcagatttgatagagaccattgagttggaaaatctcttgataaatgcatgcataaccatgcactcagcagaggctcggaaggaaagcagaggagctcatgctcgtgaagatttcacggtttgtacttctcttgtttcccttctttttggtgcctcgcacccacatgcttctatgttgtagtgacaattgattcttccttactgcttacagaaaagagatgatgagcaatggatgaagcactcgctggggtaagcatactctgttcatcaagcagtatagtagttttgatgtgggttgcagctttagacgttgtcaccacgacacctaagttaaatattgagacaaattattgtagcacttaaaagaatgtcaaccttacttatcattggctgtaacatgacatgcatgcacattaggtgttaaaacactgtagaatgtgaaatcaacatgttttctctctgatggtataatttttttatatgtaatttgatcctgaattctcgatgtttcttgttatacaggtactgggagaatgagaaggttcgcttggcatacaggccagtccacatgaacacattggacagtgaagttgagtcgttcccacccaaggcgcgtgtttattagttcgggattcacgcagcgccgtaattctgtgtggtgttaataattcaggggctgggcattcctagctgaaagtgcgacctgaattccatcctcctttttccctcggtattttgtgtaatttgctagaaaaataaaggacaaactcatgctaatgctagtgcctaactggtcccttctgggcaacttgtataaatgaaattttgtactgcttgccaatgatcttcgcctcatgcaagtacaatgtggtcatggactcacggtcccctgtgctgtgcttatcaatggcatggaagcaaagcgttttttctttct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0134800, RefSeq:Os07g0134800