Os07g0137900

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Revision as of 08:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0137900| Description = Similar to Grb10 interacting GYF protein 2| Version = NM_001065391.1 GI:115470514 GeneID:4342361| Length = 6019 bp| ...")
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Gene Name

Os07g0137900

Description

Similar to Grb10 interacting GYF protein 2

Version

NM_001065391.1 GI:115470514 GeneID:4342361

Length

6019 bp

Definition

Oryza sativa Japonica Group Os07g0137900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:2028899..2034917

Sequence Coding Region

2028983..2029070,2030084..2030151,2030317..2031246,2031334..2031415,2031544..2031609
,2032660..2033304,2033422..2034917

Expression

GEO Profiles:Os07g0137900

Genome Context

<gbrowseImage1> name=NC_008400:2028899..2034917 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:2028899..2034917 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccactccggaccgcgccaatgccgacctccgccgccgcctcgccgtcgacgcccctccaccaccgccgcagatcgccaaagacaagcaaggactggatactgagatgcctctttctcctcaatggcttatgaaggtgggagaaaacaaggaacccagtttactgggtgttcgttcagatggttcaaagataccaggaaatgatgaggacacaagcttcagtgtgaaaagaaaggatgttttcagggcctctgtgcttgatggtgaaactgggtgtcgtgaacgctggcgtgatgatgaaagagaaccaaattcagcccctcggtggaatcgctggagggagacagacaaggaacatggtgatacacgcaaactggaaaggtggtcagatgactcctccaagtactctgtggatggtcgtcgtcctccacaggaacgttggagtgactccggtaacaaggagggaaactatgatcaacgccgtgataacaaatggagtgctcgtaggggccctaatgataaggagtctgagaattggcgtgacagatggggtgattcaggcaaagatggtgatgctgcccgtgaaaaaggtttctctcactacatagctcatggaaaagacggcaacagtcatgagaaggatgctgaaagagatgataatatttctagatcatggaaatctagttatcctgtgggccgtggacggggagattcatctcatcatccctcacagaatacacaaaaatcatctgcaacatatggatatggtagagggaagccagacaatgaaattgcaagttttccaggttctcgtggaaaatttacatctggaagtacaaacacagccagttcaggatcatcacgtccattccatcttggcctactttctgacaggcctggtggtacatcaggagatcgcacagcatttagatatagtagaatgaaactgcttgacatatacagaacttctcatgttactgacttcaagatgccccttggtggctgtgaggaactctctgcatttatgcaagaagaaactttggaacctttagcattgtctgctcctactactgatgaagcggccatcttaaaagcaattgataaaggggatatcataaacagtggcgtccatcaggcttccaaagatggcccggttggaaaaaatggtagagaagatcaacaaggaggcatggaagatgtcaagggagaaacagctgcaagtctcaggggttttcctggtaatactgatttgccggccagagcggattccttgcggccagaaacatctgcttatgttgttccacaaagatctaggctcattggagaacataggcctggaccaactgctgactatatacagcaaatgccctttgcattagatcaggaaagtaaagtcgctgttattacaggtgttgatggatttgccactccaacttatcctaatccagaaagcttatctttatattacaaagatccacaaggtcaggttcaaggccctttttctggagctgacatcattggctggttcgaggctggttactttggtatcgatttgttagttcgtgttgcaaatgcaccccctgatgcgcctttcttattgcttggggatgttatgcctcatctacgagcaaaggcaagaccacctccagggttcgctgcaacaaaacccagtgacatgctaatgccagaaactctatcaactgggaattttgtcagctcgagtaacacacatgcaggatcagccagtgttggagcatttgacagtgggctaagcaggaaagatggtgcagttgaagctcaaaatcgctttttggagtcgcttatgtctaatagtgttcgtgatccttcagctgaaatgcttgctatgactgcaggtatgactgaatatggcagcagtggcattggtaacattactgtgtctggaggagagactgggaacagcatgacttaccttttggtacagaaaagattgttggagaggcaaaaatctttgcaaaatcctggttcattttggtcaggagacagtattccagctgcacaagtgcaaaacaaagatatagaagcatctgctctacacactaaattgcaccctcccatggctgatccacctcgccaagctttgcaatctcagaatgttgatttgcttgcgatgctgcattctgcagagaaacctcaagcacctgcttctaattctggattgccagcatggtcaaactaccctgaagctaagaatcttgatcctcgtgggcatggtgtggatctcactcaagggtcacttaacatgcatggtgcaagtgtgcagagttcccaacaagccactactgctattcaacagcaaaacttcatgccactgaacatgtcacaaatagctcatttgggacctgagaagttacgtgctgaaatatcccaagacccacagcttttaactaggttgcagcaccagtatctactgtcacagctacaattgcaaccacagctacctgtgacgcctcagcctcaacctcaacctcaactctctatgttggacaagatgatgttgctcaaacagcagcagcagcagcaaatgcaacaacagatgcaacagcaacaacaaatgcaacaacaaatgcaacaacaacagaagcaacgattgcaactgctgcaacttgagcagcagcagcagcagcagctgttgttgcagcaacagcacctgctttctcaagttatacctcatgggcattccagtcagcaacctgatgatctttatgggtcacaacgtacttcattgccaactggtgattcttcgaatcttggccttcagaaaatgaaagaggttcttgaggcagaccgcgttttgactgcccatggtacacaggaggggcagcaacctagtgatccaagtattatgaataagaagggtatggagggtgtaggtccatctcaaagctctgtaccttctttattgccccatgaaatttttggtggtgtaccttcaaaagatcgctactctcacccccagaagttggaagataaggtcaatgtcaatacacaattaaaagccagtatagtgaacccgatgctaacagaagttgcaaataggcgtgaagatgattctgatcaacaggaggttagatctcatgaaaggggcattggaataggaaaaacaggaatcatgtctgaaaatattttgggctctggatcttctgaggtcataggggcagctccaagtgcacctaaggagtttcctgaggcaccgtttgatccaaaacctgaaacattgtcatctcatatttccaatcaggtgcaagatttgaaaatatcttcagaaaatatcctcggtggtagtgaaccaactgtggcaactgaagttaaagcctctgatacacaggac</cdnaseq>

Protein Sequence

<aaseq>MAATPDRANADLRRRLAVDAPPPPPQIAKDKQGLDTEMPLSPQW LMKVGENKEPSLLGVRSDGSKIPGNDEDTSFSVKRKDVFRASVLDGETGCRERWRDDE REPNSAPRWNRWRETDKEHGDTRKLERWSDDSSKYSVDGRRPPQERWSDSGNKEGNYD QRRDNKWSARRGPNDKESENWRDRWGDSGKDGDAAREKGFSHYIAHGKDGNSHEKDAE RDDNISRSWKSSYPVGRGRGDSSHHPSQNTQKSSATYGYGRGKPDNEIASFPGSRGKF TSGSTNTASSGSSRPFHLGLLSDRPGGTSGDRTAFRYSRMKLLDIYRTSHVTDFKMPL GGCEELSAFMQEETLEPLALSAPTTDEAAILKAIDKGDIINSGVHQASKDGPVGKNGR EDQQGGMEDVKGETAASLRGFPGNTDLPARADSLRPETSAYVVPQRSRLIGEHRPGPT ADYIQQMPFALDQESKVAVITGVDGFATPTYPNPESLSLYYKDPQGQVQGPFSGADII GWFEAGYFGIDLLVRVANAPPDAPFLLLGDVMPHLRAKARPPPGFAATKPSDMLMPET LSTGNFVSSSNTHAGSASVGAFDSGLSRKDGAVEAQNRFLESLMSNSVRDPSAEMLAM TAGMTEYGSSGIGNITVSGGETGNSMTYLLVQKRLLERQKSLQNPGSFWSGDSIPAAQ VQNKDIEASALHTKLHPPMADPPRQALQSQNVDLLAMLHSAEKPQAPASNSGLPAWSN YPEAKNLDPRGHGVDLTQGSLNMHGASVQSSQQATTAIQQQNFMPLNMSQIAHLGPEK LRAEISQDPQLLTRLQHQYLLSQLQLQPQLPVTPQPQPQPQLSMLDKMMLLKQQQQQQ MQQQMQQQQQMQQQMQQQQKQRLQLLQLEQQQQQQLLLQQQHLLSQVIPHGHSSQQPD DLYGSQRTSLPTGDSSNLGLQKMKEVLEADRVLTAHGTQEGQQPSDPSIMNKKGMEGV GPSQSSVPSLLPHEIFGGVPSKDRYSHPQKLEDKVNVNTQLKASIVNPMLTEVANRRE DDSDQQEVRSHERGIGIGKTGIMSENILGSGSSEVIGAAPSAPKEFPEAPFDPKPETL SSHISNQVQDLKISSENILGGSEPTVATEVKASDTQD</aaseq>

Gene Sequence

<dnaseqindica>85..172#1186..1253#1419..2348#2436..2517#2646..2711#3762..4406#4524..6019#cccttcgctcgctcgcctcctctttccttcctctcgctcacaaacctcccaactagggttttccccgccgccgccgccgccgccatggccgccactccggaccgcgccaatgccgacctccgccgccgcctcgccgtcgacgcccctccaccaccgccgcagatcgccaaaggtccctccccaactcagccccccgccgtctcccctcccctccctctcgatccgttcccccgggccggaaccctagctgttccgtggttgctcgggccggtccgatttggttccagttcggtcgttcgatccgccccgccgttcccggagttttggggtttttgggcggttgggaaatggtggttgtcccccccccccctcccctcacttggacttggtggtgaggcaggtgttgggggcgtgttaagggcgggtaccttgggtggttgagtgaaatcggtttgggatttgggtggattagatgcaatggtcctagtttaacctccgtctgatttgtggggttttgtgcggttgatttggctgggatggattctcttccctgcattttattactttgatttctgctgtgtatgcttgcagatttatatttttttctatgtgcatatgctgttgttggtaacttatgctttgatgttgttagcatgtgccatgtcatgtcacacccgttgttgtgtgagaaatttggatttgatgtagctatgtgtagaggatgacagcttgtttcactgattactcaacatgtggaaaaaacctacgtgttgttgtagaaacccgtttgatttaaatttgcatcctgtgccaattggcctgttcggcaagcaagggctgcagccgctgctgtcttcgtgcttgcgggactgttccagttggctacggtttgcgtcgcagccctggcagccgaacaggcccaatattgtggtaaaaagttgtagaactaatgtccaaaaccctgatctagttgtgttgatttgaggtatattattctagcctttcattttatcaagtcaaccattggtcctttatttggttaattatttgtttgttacaaacatatgagaggaatggttgtgttggtaatatcacatattaatggcgcaatctgtgttctatacattttctttgtcagcagaacatgttccatgcctcattcatgatactattttttttttgcagacaagcaaggactggatactgagatgcctctttctcctcaatggcttatgaaggtgggagaaaacaaggttagacattgagaagctaggttaataactagacttagggaactggtcatgctaatactatacatgatggttgtaacagtaggataccttttaagtgtataataacctctcttattagttattttttgcttgtctatactgaagatcgttgattgcttgtggcaggaacccagtttactgggtgttcgttcagatggttcaaagataccaggaaatgatgaggacacaagcttcagtgtgaaaagaaaggatgttttcagggcctctgtgcttgatggtgaaactgggtgtcgtgaacgctggcgtgatgatgaaagagaaccaaattcagcccctcggtggaatcgctggagggagacagacaaggaacatggtgatacacgcaaactggaaaggtggtcagatgactcctccaagtactctgtggatggtcgtcgtcctccacaggaacgttggagtgactccggtaacaaggagggaaactatgatcaacgccgtgataacaaatggagtgctcgtaggggccctaatgataaggagtctgagaattggcgtgacagatggggtgattcaggcaaagatggtgatgctgcccgtgaaaaaggtttctctcactacatagctcatggaaaagacggcaacagtcatgagaaggatgctgaaagagatgataatatttctagatcatggaaatctagttatcctgtgggccgtggacggggagattcatctcatcatccctcacagaatacacaaaaatcatctgcaacatatggatatggtagagggaagccagacaatgaaattgcaagttttccaggttctcgtggaaaatttacatctggaagtacaaacacagccagttcaggatcatcacgtccattccatcttggcctactttctgacaggcctggtggtacatcaggagatcgcacagcatttagatatagtagaatgaaactgcttgacatatacagaacttctcatgttactgacttcaagatgccccttggtggctgtgaggaactctctgcatttatgcaagaagaaactttggaacctttagcattgtctgctcctactactgatgaagcggtaattttatgctataattttctcaagtgggatgatctcattattgcagtacagtttcttatctcacagttctatttatgtttttaggccatcttaaaagcaattgataaaggggatatcataaacagtggcgtccatcaggcttccaaagatggcccggttggaaaaagtaatcctgaatttccccattaaaacaaccaaaatcatgttttcagcagtttgtttatgttgttgtgtactactaacatatgaaaatatttttttatcttactgattgaattctcactctttaattagatggtagagaagatcaacaaggaggcatggaagatgtcaagggagaaacagctgcaagtctcaggggtaccttgtttatttctgtctttacaattttgttgtacactgcattgcatttatttgaataggcatcaagtgattaactgattacacagagatgatagtgtattcactcatccttgaacattattttttgaagtaaatttcacaaaaccacatgatttatgggtaagttgcataaaaccctagatattttgattggtggcaaataaacctcaggtattatggttataaagtttcacaaaaccccagccctatgaatgttgagtatggttttacttaaaattttaaaacatagcatgtatgcaaaatttttaattattgacttcttgattaaggttgatagtttaactcttcagtcttcactactctgaaaaatattgttttagatcgagatttgaataaaggttgggtatgtgccacaagtcatattacatgtggttttccgcaaccttgaccataaaacatggggttttctgaaatttactctcttattttttttagtcaccaccaactctctgatgactaggggactttccaggtttttgttagtataattttgttttcttaaatatgtggagttgtgtacattgaccttgtttacaatcagtcaatttgacatgcgctttgaagcatttccttttctattttagtgcctctacatttaaccaaattttatatttgctgtagatgttatagcaagtttcctgtttgctcctgtatgtaaatttggttggacaagacaaagtttgcagctgcaagcattctatgtttttcttttggacaggaaaacgtttttaacttcttgtagacattcaataaaactatgctataaggtttgcaaactaatccatcaatatgatctctttgttttaaattcgtaggccatgttgaagtccttactgttttttgtattttttaaaagatatgttggaaggctgtcaaaccagctcactttgtgctgttattattctactactattctttcgtaagttcttgcagtgtctgttaaatcattttcccatgctaaaggttgccactgttggtttataataggttttcctggtaatactgatttgccggccagagcggattccttgcggccagaaacatctgcttatgttgttccacaaagatctaggctcattggagaacataggcctggaccaactgctgactatatacagcaaatgccctttgcattagatcaggaaagtaaagtcgctgttattacaggtgttgatggatttgccactccaacttatcctaatccagaaagcttatctttatattacaaagatccacaaggtcaggttcaaggccctttttctggagctgacatcattggctggttcgaggctggttactttggtatcgatttgttagttcgtgttgcaaatgcaccccctgatgcgcctttcttattgcttggggatgttatgcctcatctacgagcaaaggcaagaccacctccagggttcgctgcaacaaaacccagtgacatgctaatgccagaaactctatcaactgggaattttgtcagctcgagtaacacacatgcaggatcagccagtgttggagcatttgacagtgggctaagcaggaaagatggtgcagttgaagctcaaaatcgctttttggagtcgcttatgtctaatagtgttcgtgatccttcagctgaaatgcttgctatgactgcaggtttgttttcttagcaagaatagcggccgtttcattccatttattgttttttataaccataattctaatcttgcatgcatcctggtttaacataaaatccttttttcctttaattaggtatgactgaatatggcagcagtggcattggtaacattactgtgtctggaggagagactgggaacagcatgacttaccttttggtacagaaaagattgttggagaggcaaaaatctttgcaaaatcctggttcattttggtcaggagacagtattccagctgcacaagtgcaaaacaaagatatagaagcatctgctctacacactaaattgcaccctcccatggctgatccacctcgccaagctttgcaatctcagaatgttgatttgcttgcgatgctgcattctgcagagaaacctcaagcacctgcttctaattctggattgccagcatggtcaaactaccctgaagctaagaatcttgatcctcgtgggcatggtgtggatctcactcaagggtcacttaacatgcatggtgcaagtgtgcagagttcccaacaagccactactgctattcaacagcaaaacttcatgccactgaacatgtcacaaatagctcatttgggacctgagaagttacgtgctgaaatatcccaagacccacagcttttaactaggttgcagcaccagtatctactgtcacagctacaattgcaaccacagctacctgtgacgcctcagcctcaacctcaacctcaactctctatgttggacaagatgatgttgctcaaacagcagcagcagcagcaaatgcaacaacagatgcaacagcaacaacaaatgcaacaacaaatgcaacaacaacagaagcaacgattgcaactgctgcaacttgagcagcagcagcagcagcagctgttgttgcagcaacagcacctgctttctcaagttatacctcatgggcattccagtcagcaacctgatgatctttatgggtcacaacgtacttcattgccaactggtgattcttcgaatcttggccttcagaaaatgaaagaggttcttgaggcagaccgcgttttgactgcccatggtacacaggaggggcagcaacctagtgatccaagtattatgaataagaagggtatggagggtgtaggtccatctcaaagctctgtaccttctttattgccccatgaaatttttggtggtgtaccttcaaaagatcgctactctcacccccagaagttggaagataaggtcaatgtcaatacacaattaaaagccagtatagtgaacccgatgctaacagaagttgcaaataggcgtgaagatgattctgatcaacaggaggttagatctcatgaaaggggcattggaataggaaaaacaggaatcatgtctgaaaatattttgggctctggatcttctgaggtcataggggcagctccaagtgcacctaaggagtttcctgaggcaccgtttgatccaaaacctgaaacattgtcatctcatatttccaatcaggtgcaagatttgaaaatatcttcagaaaatatcctcggtggtagtgaaccaactgtggcaactgaagttaaagcctctgatacacaggac</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0137900, RefSeq:Os07g0137900