Os07g0142000

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Revision as of 08:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0142000| Description = Reticulon family protein| Version = NM_001065402.1 GI:115470536 GeneID:4342374| Length = 2161 bp| Definition = Oryz...")
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Gene Name

Os07g0142000

Description

Reticulon family protein

Version

NM_001065402.1 GI:115470536 GeneID:4342374

Length

2161 bp

Definition

Oryza sativa Japonica Group Os07g0142000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:2202800..2204960

Sequence Coding Region

2203597..2203774,2203886..2204066,2204141..2204282,2204371..2204440,2204546..2204715

Expression

GEO Profiles:Os07g0142000

Genome Context

<gbrowseImage1> name=NC_008400:2202800..2204960 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:2202800..2204960 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccggagcactctgagaatgcggctgcgaacattgtggacagcatagtggacgccattgccgacaatcttcccaagcagaagtcagtcagatttgaagatggctcaatctctgatcaagctaagagactcttcggtggtcagaagtctgtccatcatgttttgggtggtggaaaatccgccgacgtgttgttgtggaggaacaagaagatatcttcaagtgttcttgcagttgcaacggctgtctgggttttcttcgagtggctcgactaccacttcctgacgattgcttgctttgttcttgttcttggcatggttgtccagtttgcatggtccacttttgcaggcatgctaaatgggtcaccttcgaaagttcctcgcgtcgaattgccggatgagctgttcgcaaacattggttctgcaattggcacccaagtgaacaagttcttgggcactcttcaggatgtgtcttgtggaagagacctgaagaattttctcctggtgattgccgggttcttcgcggccgctatcattgggagctggtgcaatctcctcactgtcatttacattggatttgtgtgtgctcacactctcccggtgctgtatgagaagaaccaagaaaaagtggacgagttcctgtacaacacacttggcctgcttcagaatcagtatcagaaacttgacaagggtgtcctgggcaaggtgcccaaagggatcatcaagcttaagaagagcgattag</cdnaseq>

Protein Sequence

<aaseq>MPEHSENAAANIVDSIVDAIADNLPKQKSVRFEDGSISDQAKRL FGGQKSVHHVLGGGKSADVLLWRNKKISSSVLAVATAVWVFFEWLDYHFLTIACFVLV LGMVVQFAWSTFAGMLNGSPSKVPRVELPDELFANIGSAIGTQVNKFLGTLQDVSCGR DLKNFLLVIAGFFAAAIIGSWCNLLTVIYIGFVCAHTLPVLYEKNQEKVDEFLYNTLG LLQNQYQKLDKGVLGKVPKGIIKLKKSD</aaseq>

Gene Sequence

<dnaseqindica>798..975#1087..1267#1342..1483#1572..1641#1747..1916#attccagtaactttcctctcatctctcacagaaaaaacattcctctcatctccaatcagcagctatctcccttcctcatcaccagcttgctgtgatcttatcaggcctttttgttgttctgctggtcttgctcggtaattttttgctccaaatccatctcctttctcttcttttctgctgttacccgccgtatctttgctttaccttcttctttttttttcttttttttttttgcgaatccatcttgctttagtttgttgttctgttccgagtaaaaagaatacccttgatggcctagtctgaccaaaaaggagtgtgaagctcttcgaaaggaaaaggtttagacaatacgagcctcagatgctcggttgcttagtcgatccggtggtgaatcgaacaatttaattcactgatgctgttaatctttttctttaaaagaaaattcctttctgttattggtggtattttcttcaacataaacatatatctgaagattcttcagaaatgatctgaagtctgaagatttcagcgtggcgccttagctgatttattgtaactgtgatgaatatagcagcgttgactgggtacagtacaattacttgcacatcctattatgtagaaacaagaaatttgatgaatataacaaggaattcttaatgtttatggccttaaatcagcttaaaacaacactgaagccacgttgttgttaaatgaaggtgactgctaccttagttcatgcgaaaatattcagtgcgacctaacctaattctactgaaacgaattcagcgtgcaaagagatgccggagcactctgagaatgcggctgcgaacattgtggacagcatagtggacgccattgccgacaatcttcccaagcagaagtcagtcagatttgaagatggctcaatctctgatcaagctaagagactcttcggtggtcagaagtctgtccatcatgttttgggtggtggaaaatgtacgcaaaatctccctgattgatgctcagatatactttgcaaagaacctatacataatacatatactgcaatgtttgacatctatgatctatacttgcttgcgatcacagccgccgacgtgttgttgtggaggaacaagaagatatcttcaagtgttcttgcagttgcaacggctgtctgggttttcttcgagtggctcgactaccacttcctgacgattgcttgctttgttcttgttcttggcatggttgtccagtttgcatggtccacttttgcaggcatgctaaatgggtatgaaacctggaaaaaattctctgcatcttgtgttgtcagagaaagcctgtaaataatctctgaactttcaggtcaccttcgaaagttcctcgcgtcgaattgccggatgagctgttcgcaaacattggttctgcaattggcacccaagtgaacaagttcttgggcactcttcaggatgtgtcttgtggaagagacctgaagaattttctcctggtatggagtgcagcaatgttcatagtcatttcatctgtttgtcaccaatgtgcacaatgttgtaacatcagatcaagctttgtttcaggtgattgccgggttcttcgcggccgctatcattgggagctggtgcaatctcctcactgtcatttacattggtactgaaaaatctattctgcattttctctgtcaattgtcactgtgggtctgtgaagattgagcaagatttgattcttaaaactttgaattaattttctgttcaggatttgtgtgtgctcacactctcccggtgctgtatgagaagaaccaagaaaaagtggacgagttcctgtacaacacacttggcctgcttcagaatcagtatcagaaacttgacaagggtgtcctgggcaaggtgcccaaagggatcatcaagcttaagaagagcgattagtttcactagctgctgctgctgctaatgctgcgtacagtcaatcagaatactgcgtaatttggacagatgttagcttcccctgaacagttaattgtgtacagtattggaaaacaccgtgtcagtgatgctagtggtatactcctatattgtaggccaaattcatcagtggcagattgtttcagctagtctcatgtgttttgcccatgagagaaattgggaaaaaaaataaaaggtgatttgtgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0142000, RefSeq:Os07g0142000