Os07g0142900

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Revision as of 08:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0142900| Description = Aldo/keto reductase family protein| Version = NM_001065409.1 GI:115470550 GeneID:4342381| Length = 3122 bp| Definit...")
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Gene Name

Os07g0142900

Description

Aldo/keto reductase family protein

Version

NM_001065409.1 GI:115470550 GeneID:4342381

Length

3122 bp

Definition

Oryza sativa Japonica Group Os07g0142900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:2225961..2229082

Sequence Coding Region

2226010..2226256,2226956..2227047,2227143..2227180,2227289..2227450,2227540..2227562
,2227673..2227744,2227858..2228025,2228318..2228400,2228533..2228595
,2228735..2228917

Expression

GEO Profiles:Os07g0142900

Genome Context

<gbrowseImage1> name=NC_008400:2225961..2229082 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:2225961..2229082 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggccatggcgctgcaggtggtggccggcggcggctgctgttgccagcggcccgttcttggagctggtcggcggcggttggcggcggcgcgtgcggtggcgtcggacgcggcggcggcgaaggtgagcgaggaggaggggaaggtgaggctgggtgggtcggaagtggcggtgagcaagctcggcatcggcgcctggtcgtggggggacaccacctactggaacgactccgagtgggacgacaggagactgcaggaggctaaagcagcatttgacacaagcatagataatgggatgaccttatttgatacagcagaagtttatggtacagcgctgatgggagcagtaaattctgaaagtttactcggaggtttcatcaaggaaaggcaggagaaagaacagattgatgttgccgtcgcaacaaagtttgctgcacttccatggagatttggccgaggaagtgttctttccgcactgaagaaatcgcttgaccgtcttgggttatcttcagttgagctctaccaacttcattggccagggctatggggaaatgaagggtatcttgatggacttgcagatgcctatgagcaaggccttgtaaaggctgttggagtctcaaactacaatgagaaacgccttcgggatgcatatgcgcggatgaagaaaagaggagttccacttgctgcaaaccaagtgaactacagcctaatatacaggactcctgagttgaatggtgtgaaggcagcttgtgatgagcttggcatcaccctgattgcttattccccaatagcccaaggtgttctgtcaggaaaatacactccagaaaaacctcctaccggtcctcgagcaaacacatatacccctgagttcctcaccaagcttcaaccactcatgaacaggatcaaggagattggagaaagctatgggaagaacccaacccaggtttcactgaactggctgacatgccaaggcaatgtggtgccaatccccggagccaagaacgccggccaggcgcaggagttcgccggcgcgctcggctggagcctcaccggcgacgaggtcgaagagttgcggtctctggcacgcgagatcaagggcatcaagatgcccatcgaggagtcatag</cdnaseq>

Protein Sequence

<aaseq>MAAAMALQVVAGGGCCCQRPVLGAGRRRLAAARAVASDAAAAKV SEEEGKVRLGGSEVAVSKLGIGAWSWGDTTYWNDSEWDDRRLQEAKAAFDTSIDNGMT LFDTAEVYGTALMGAVNSESLLGGFIKERQEKEQIDVAVATKFAALPWRFGRGSVLSA LKKSLDRLGLSSVELYQLHWPGLWGNEGYLDGLADAYEQGLVKAVGVSNYNEKRLRDA YARMKKRGVPLAANQVNYSLIYRTPELNGVKAACDELGITLIAYSPIAQGVLSGKYTP EKPPTGPRANTYTPEFLTKLQPLMNRIKEIGESYGKNPTQVSLNWLTCQGNVVPIPGA KNAGQAQEFAGALGWSLTGDEVEELRSLAREIKGIKMPIEES</aaseq>

Gene Sequence

<dnaseqindica>50..296#996..1087#1183..1220#1329..1490#1580..1602#1713..1784#1898..2065#2358..2440#2573..2635#2775..2957#gagccagcagcaacacgcacgcacgcaccacacacgtagcagcagagcaatggcggcggccatggcgctgcaggtggtggccggcggcggctgctgttgccagcggcccgttcttggagctggtcggcggcggttggcggcggcgcgtgcggtggcgtcggacgcggcggcggcgaaggtgagcgaggaggaggggaaggtgaggctgggtgggtcggaagtggcggtgagcaagctcggcatcggcgcctggtcgtggggggacaccacctactggaacgactccgagtgggacggtacgcactgcctcattaatcaatccatcgaattgttcaagcttgttttgtttgtgctggaaaagattagttcttgttgctaattgttgcagtcaaatttagctccaggtgattctcagttgtttaggtgttacctgtagtaggtctggttctaagcagctcaaagcagcaggggcagaaagtgtgtgatcaggtcatgcttcccatgcgcacaaggtgcttgttgcattgcctccccgggtgacttgcacttgcacgcatgtcacttcaatcctctccggtgtgaaatattttgtcatgtgatttcgacaaccaaaaagtcccttttgttgagacatatcgtctacaaaccaacggtcatccgattgttcttgttccggactacaaccatcaggcaggtcactggttttggtttggtgtttccctttcaagagggcccggtgtaaatctcttcctgattagttaattagcaacttaacatgtccctatcattggttagttaattatcaactctgtccttttcctgcccctcttccccctctttctgggagagtttttcttttgtaaggtttccacttcaggtgtatgttatggtctttgtatttgtgatacaatcgttgctgctgttttgggaagaaaagtcttccaaaaacagaacaaagaaatgataagaaaacgtgcttcctttgatttcatcagacaggagactgcaggaggctaaagcagcatttgacacaagcatagataatgggatgaccttatttgatacagcagaagtttatggtacagcggtaagaaactagaaaaacttcatgattcctcgctcatattttccttgcgtcaaaattctgaaggttcatttaaccttagttgttctgtccttcagctgatgggagcagtaaattctgaaagtttactcggagggtatgccacgttttgctgttcagcactccattttttttattattttttatttttgcgaaagtcacatgtgcagcaatagtcacctgttgttgtctctcttgccgccagtttcatcaaggaaaggcaggagaaagaacagattgatgttgccgtcgcaacaaagtttgctgcacttccatggagatttggccgaggaagtgttctttccgcactgaagaaatcgcttgaccgtcttgggttatcttcagttgagctctaccaacttcattggtcggcttgtctgctctttctctgatacatactttttctgtaaattttgagcattttgatctcagccgcttttgtttctctgttttcaggccagggctatggggaaatgaaggtacacagtccaatgaaaattacccatataaccatttttatgaattattagatagttccttctagcatgacaaaaacttcaacattctgacatcgttgagcattattcagggtatcttgatggacttgcagatgcctatgagcaaggccttgtaaaggctgttggagtctcaaactacaatggtctgtattctgtctgtggcctgcaaattaaatgttcttgtacattcctcgaattgtttcttcctcagtaaactttcattgaaataatagtttctatgatgacttcattcaagagaaacgccttcgggatgcatatgcgcggatgaagaaaagaggagttccacttgctgcaaaccaagtgaactacagcctaatatacaggactcctgagttgaatggtgtgaaggcagcttgtgatgagcttggcatcaccctgattgcttattccccaatagcccaaggtgagaaccatttctccttattttctgtcctaattgcttcatcgtatttagtgctatttacaatacaatcgcactcgttcttgtacatttttttagccgggacggccaaaggattaggccgctaaaatttgaattttaaaacttaattttggagttgattttacggtattttcagcgtagtttctttttcagcattggttttttgatcgctaataaaccatttggcatataattagctcttggccaaccgatggggcccttgttcttgtaatgactcatttccgttgttcaggtgttctgtcaggaaaatacactccagaaaaacctcctaccggtcctcgagcaaacacatatacccctgagttcctcaccaaggttatattagtacatattactgaacccttaagctagctagttacatacagcttcagcttggatgcgccatttagtctctgcaactgaacatttttcttatctaaaacctataaacatgtttcatgtgcacagcttcaaccactcatgaacaggatcaaggagattggagaaagctatgggaagaacccaacccaggtgcttcacctcatataatgctcagcaaatccatgcaagaaaaggaattaatatctccaagtaggatgagcagcaacttgcaaggaacagaagtgcagttccactgaaaacagctggtgttttcttttttttgtttcaggtttcactgaactggctgacatgccaaggcaatgtggtgccaatccccggagccaagaacgccggccaggcgcaggagttcgccggcgcgctcggctggagcctcaccggcgacgaggtcgaagagttgcggtctctggcacgcgagatcaagggcatcaagatgcccatcgaggagtcatagacatgtaaaaactgaagaagtttttcatgtatatgataggagatgtgtattgattgtaccatgcaatagtaaacattttacggcgataaaatgtgtagaaggtgtagaaaatgagtcagaaatttctgcctgcatgaatagaaaaggtttatatgactttgagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0142900, RefSeq:Os07g0142900