Os07g0144500

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Revision as of 08:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0144500| Description = Patatin family protein| Version = NM_001065416.2 GI:297606725 GeneID:4342389| Length = 1655 bp| Definition = Oryza ...")
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Gene Name

Os07g0144500

Description

Patatin family protein

Version

NM_001065416.2 GI:297606725 GeneID:4342389

Length

1655 bp

Definition

Oryza sativa Japonica Group Os07g0144500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:2289472..2291126

Sequence Coding Region

2289472..2289939,2290016..2290444,2290688..2290750,2290845..2291126

Expression

GEO Profiles:Os07g0144500

Genome Context

<gbrowseImage1> name=NC_008400:2289472..2291126 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:2289472..2291126 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggccggccaggatgacgcggcggacaggctcacctacgagatcttctccatcctcgagagcaagttcctcttcggctatggcggcggcggcggcggcgagacgaagagcttgcagtgcgcgccgccggtgtcgagagggaacagggtgtgcgtgctctccgtcgacggcggcgcgcgcccggaggacgggctcctcgccgcggcggcgttggtgcggctcgaggccgcggtgcagcggcgcgccggcagcaaggccgcgcggctcgcggatttcttcgatgtcgccgctggctccggcgccgggggcgtcctcgccgccatgctgttcgcgcgcggcccgtgtgggcggccgatgtactccgctgatgacgcgctcggcttcctgctccgccgcgtccgccgccgcgggtggtcgtcccgcgccggcggcctgctccgccgccccgccggcgccttccacaaggtgttcggcgagctgacgctgcgggacacggtgcgcccggtgctcgtcccgtgctacgacctcgcgacgcgggcgccgttcctcttctcccgcgccgacgccgcgcagtcgccggcgtacgacttccgcctccgagacgcctgcgccgcgacgtgcgccccctcgggcggcggcgccgccgtggaggcctcctcggtggacggcgtcacccggatcacggcggtcggcagcggcgtcgcgctggggaacccgacggccgcggcgatcacccacgttctcaacaaccggcgcgagttccccgccgcggccggcgtcgacaacctgctcgtcatctccatcggcaccggcgaggccgccggcagcagcagccgccaccgcgcgaggacgccggtgatcgcgcggatcgccgccgagggcgcgtcggacatggtagatcaagctgtcgccatggcgttcggacaacacaggacaagcaattacgtccgcatccagggtatgggggtggcgcggcggcgcggcggcggcgtggcgtgcggcggcgagacggcggagaaggcggtgtgggtggcggaggcgatgctgcagcagaggaacgtggaggcggtgatgttccaggggaggaggctcgccggcgagaccaacgccgagaaggtggagcggttcgcgcgtgagctgatcaaggaacacggccggaggaagcagcatgttccgccggcggcgagcggcggcggcggcggcggactggactgccatgtgagcaagaaacagccgtaa</cdnaseq>

Protein Sequence

<aaseq>MEAGQDDAADRLTYEIFSILESKFLFGYGGGGGGETKSLQCAPP VSRGNRVCVLSVDGGARPEDGLLAAAALVRLEAAVQRRAGSKAARLADFFDVAAGSGA GGVLAAMLFARGPCGRPMYSADDALGFLLRRVRRRGWSSRAGGLLRRPAGAFHKVFGE LTLRDTVRPVLVPCYDLATRAPFLFSRADAAQSPAYDFRLRDACAATCAPSGGGAAVE ASSVDGVTRITAVGSGVALGNPTAAAITHVLNNRREFPAAAGVDNLLVISIGTGEAAG SSSRHRARTPVIARIAAEGASDMVDQAVAMAFGQHRTSNYVRIQGMGVARRRGGGVAC GGETAEKAVWVAEAMLQQRNVEAVMFQGRRLAGETNAEKVERFARELIKEHGRRKQHV PPAASGGGGGGLDCHVSKKQP</aaseq>

Gene Sequence

<dnaseqindica>1..468#545..973#1217..1279#1374..1655#atggaggccggccaggatgacgcggcggacaggctcacctacgagatcttctccatcctcgagagcaagttcctcttcggctatggcggcggcggcggcggcgagacgaagagcttgcagtgcgcgccgccggtgtcgagagggaacagggtgtgcgtgctctccgtcgacggcggcgcgcgcccggaggacgggctcctcgccgcggcggcgttggtgcggctcgaggccgcggtgcagcggcgcgccggcagcaaggccgcgcggctcgcggatttcttcgatgtcgccgctggctccggcgccgggggcgtcctcgccgccatgctgttcgcgcgcggcccgtgtgggcggccgatgtactccgctgatgacgcgctcggcttcctgctccgccgcgtccgccgccgcgggtggtcgtcccgcgccggcggcctgctccgccgccccgccggcgccttccacaaggttggcgttcgcgtgctcgtctactttttgtactactcggtatgcgtctaagctcgcgccatggctggtgaaccaggtgttcggcgagctgacgctgcgggacacggtgcgcccggtgctcgtcccgtgctacgacctcgcgacgcgggcgccgttcctcttctcccgcgccgacgccgcgcagtcgccggcgtacgacttccgcctccgagacgcctgcgccgcgacgtgcgccccctcgggcggcggcgccgccgtggaggcctcctcggtggacggcgtcacccggatcacggcggtcggcagcggcgtcgcgctggggaacccgacggccgcggcgatcacccacgttctcaacaaccggcgcgagttccccgccgcggccggcgtcgacaacctgctcgtcatctccatcggcaccggcgaggccgccggcagcagcagccgccaccgcgcgaggacgccggtgatcgcgcggatcgccgccgagggcgcgtcggacatggtacgtgccccccgatcaatacaccacacgacacggacgccactgttcactcttgttttacacgcacacgtagagttgaagcaaacagagtacgccgcataattaatttgctagtacaatttttgtacgcatgcatctcgtctcgtcttgctcggagtactcgacatgagactgagatctgatctggcatgcaaatgcaaatgcaaatgctgaaatccatccaatccaatccgatcccattaggtagatcaagctgtcgccatggcgttcggacaacacaggacaagcaattacgtccgcatccaggtaaaaggctacagtcaaaacctctgagatttttgcagtacaatcgatcagaatttgattgatttgggtggatggattgaaattgttcgtgcagggtatgggggtggcgcggcggcgcggcggcggcgtggcgtgcggcggcgagacggcggagaaggcggtgtgggtggcggaggcgatgctgcagcagaggaacgtggaggcggtgatgttccaggggaggaggctcgccggcgagaccaacgccgagaaggtggagcggttcgcgcgtgagctgatcaaggaacacggccggaggaagcagcatgttccgccggcggcgagcggcggcggcggcggcggactggactgccatgtgagcaagaaacagccgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0144500, RefSeq:Os07g0144500