Os07g0145400

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Revision as of 08:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0145400| Description = Protein kinase-like domain containing protein| Version = NM_001065418.1 GI:115470568 GeneID:4342391| Length = 5517 b...")
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Gene Name

Os07g0145400

Description

Protein kinase-like domain containing protein

Version

NM_001065418.1 GI:115470568 GeneID:4342391

Length

5517 bp

Definition

Oryza sativa Japonica Group Os07g0145400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:2345599..2351115

Sequence Coding Region

2345980..2346563,2346715..2348262,2349214..2350279

Expression

GEO Profiles:Os07g0145400

Genome Context

<gbrowseImage1> name=NC_008400:2345599..2351115 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:2345599..2351115 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggattcttgggagttttttggtgctgctcctgcttgctgcccctgcatttggccagctaccttcacaggacatccttgcgctccttgctttcaagaagggcatcactcatgaccctgctggattcatcaccgattcgtggaacgacgagtcgattgatttcaatggctgtccggcttcctggaacggcatcgtgtgcaatggcgcaaacgtggcaggggttgtgcttgatggccatggcatctccggtgtcgccgatctgtccgtgttcgtcaatctgactatgcttgtgaagctctctatggccaataacaatctgtctgggagcctgccgagcaatgtgggtagtctgaagagcctgaagttcatggatatctcaaacaaccggttctcggggccgattcctgataacataggcaatctccggagcctgcagaacctgtcgcttgccaggaacaacttctcagggccactgcctgactccatcgatgggcttgcgtcgcttcagtcactggatgtgagtggaaactctttgtctggtccattgccttcatctctgaaaggtctccgcagcatggttgctctgaacctctcatacaatgccttcacaaagggcatcccatctgggcttggccttcttgtgaatctccaatctttggatctaagctggaatcaattggaaggcggtgttgattggaaattcttgattgagtcaactgttgctcatgttgacttcagtgggaacttgctcaccagtaccacccccaaagagctcaagttcctggcagatatttcagagacagttctatatctcaacttgagcaacaataagttgactgggtcattgattgatggagttgagctctcgacatttgggagattgaaggtgcttgatctgagccataatcagttatctggagacttgccagggttcaattatgtctatgatcttgaagttttgcgactggcaaacaatgcattcacggggtttgtacctagtggacttctgaaaggggattctctggttctcagtgagctggacctgagtgcaaataatctgactggacacatcaatatgatcacatcgaccaccttgcaagttattaatctttcctccaatgctctctttggggatcttccaatgcttgctggaagctgcactgtgttagatctgtcaaataacaagtttaaaggaaatttgtcagttattgccaaatggagcaatgatttggagtatgttgatcttagccagaacaatctaactggaacaattcctgatgtgagctctcaattccttcgcttgaactacctgaatctttcccataattccctagctgacaccatccctgaagctgttgttcagtaccccaaactcactgtccttgatctcagctccaatcagttcagaggtcctattcctgctaatttactcacttcgtccatgctgcaagagctctacatccacgacaatatgcttagtggaggtctatcatttccaggatcatcgtcaaaaaatctgagtcttcaagttcttgatatttctggaaatcactttaatggcagcctccctgatgaaatagcatctttatctagcctccaagctcttgatatatctacaaacaatttctctggtcctttgccagcctctatcaccaagcttgcagcgctcactgctctcgacatatcaataaaccagttcactgggtcattgcctgatgcacttccagatacattgcaatcattcaatgcctcttataatgatctatctggtgttgttccagtgaacttgaggaagtttccagaatcttccttccatcctgggaactcgagactagactatcctgctagctcttctgggtctggcagttcctctggttcagctggtggcaggtcactcagtgcagcagctaaaatagcacttatagcagctagtatcgttgctcttgtcatccttatccttgttgccattgtttgccattacaagcaaatctcacggcagttccctagctcagaaaaggtttcagacaagaacctccacaagactagcaaagacatggccagtacaaaaggaaaggatgacaaaggtggtttggtggtctcagcagatgagcttggtgctcctcgaaagggctctacatctgaagcactaagccaagaagagaagctgtcaggtgtagggggattttccccatccaaaggtagccgcttctcttggtcaccagattctggagaggcatacacccaggaaggcctggcacggttggatgtcagatcacctgacaggttagcaggggagttgcacttcctggatgaaacaatcacactgacaccggaggaattgtcaagggcaccggctgaggttcttgggaggagcagccacgggacttcgtacagagcaacacttgagaatggtgtcttcctaacagtgaaatggctgagggaaggtgttgcaaggcccaagaaagagttctcgaaggaggccaagaagtttgcaaacattaggcatcccaatgttgttggcttgcgtggttactactggggtccaacagcacatgaaaaactgatcttgtcggattatgtttcaccaggaagtcttgcgagctttttgtacgatcgtccaggaaggagaggccctccactgacctgggcgcaacggctgaagatcgcagttgatgtcgcgcgtggcctgaactacctccattttgaccgagcgatgcctcatggaaacctcaaggctaccaacatcttgttggacggacttgacctcaatgcccgtgtcgctgactactgcctgcaccgcctgatgacccaggctggagttgttgagcagatcctcgacctgggcgtgctaggctaccgtgccccagagctagcagcgtccaagaagccatctccctcgttcaagtctgacgtgtacgccttcggtgtcgtgctgctggagctcctaactggcaggtgtgctggggatgttgtctcgggttctgaaggtggtgttgacctgactgattgggtccgtctgcgggtggctgaaggtcggggatcagattgctttgatccagccatggcttcagattctgagaaccaagtttctgtcaagggcatgaaggatgtgctgggcattgccttgagatgcatccggccggtctctgaaagacctgggatcaagtctgtgtatgaggatctttcatcaatctag</cdnaseq>

Protein Sequence

<aaseq>MGILGSFLVLLLLAAPAFGQLPSQDILALLAFKKGITHDPAGFI TDSWNDESIDFNGCPASWNGIVCNGANVAGVVLDGHGISGVADLSVFVNLTMLVKLSM ANNNLSGSLPSNVGSLKSLKFMDISNNRFSGPIPDNIGNLRSLQNLSLARNNFSGPLP DSIDGLASLQSLDVSGNSLSGPLPSSLKGLRSMVALNLSYNAFTKGIPSGLGLLVNLQ SLDLSWNQLEGGVDWKFLIESTVAHVDFSGNLLTSTTPKELKFLADISETVLYLNLSN NKLTGSLIDGVELSTFGRLKVLDLSHNQLSGDLPGFNYVYDLEVLRLANNAFTGFVPS GLLKGDSLVLSELDLSANNLTGHINMITSTTLQVINLSSNALFGDLPMLAGSCTVLDL SNNKFKGNLSVIAKWSNDLEYVDLSQNNLTGTIPDVSSQFLRLNYLNLSHNSLADTIP EAVVQYPKLTVLDLSSNQFRGPIPANLLTSSMLQELYIHDNMLSGGLSFPGSSSKNLS LQVLDISGNHFNGSLPDEIASLSSLQALDISTNNFSGPLPASITKLAALTALDISINQ FTGSLPDALPDTLQSFNASYNDLSGVVPVNLRKFPESSFHPGNSRLDYPASSSGSGSS SGSAGGRSLSAAAKIALIAASIVALVILILVAIVCHYKQISRQFPSSEKVSDKNLHKT SKDMASTKGKDDKGGLVVSADELGAPRKGSTSEALSQEEKLSGVGGFSPSKGSRFSWS PDSGEAYTQEGLARLDVRSPDRLAGELHFLDETITLTPEELSRAPAEVLGRSSHGTSY RATLENGVFLTVKWLREGVARPKKEFSKEAKKFANIRHPNVVGLRGYYWGPTAHEKLI LSDYVSPGSLASFLYDRPGRRGPPLTWAQRLKIAVDVARGLNYLHFDRAMPHGNLKAT NILLDGLDLNARVADYCLHRLMTQAGVVEQILDLGVLGYRAPELAASKKPSPSFKSDV YAFGVVLLELLTGRCAGDVVSGSEGGVDLTDWVRLRVAEGRGSDCFDPAMASDSENQV SVKGMKDVLGIALRCIRPVSERPGIKSVYEDLSSI</aaseq>

Gene Sequence

<dnaseqindica>4553..5136#2854..4401#837..1902#caccaccaccattcccctctcttctcctccttctccctagcagccaagccaccaagaacccaatcccccattgctagggttcctcgcttcgccgccgtcctcccttctctccacggcattgcctccaccacttcccctcctcccctgccgccgcaaccattcattcttttccttcattctccaaggtggtgtggttgcttgttcttaatgcgtcagagcaaccggcctcattgctgggtaaggaggatgcaagattgcaagtgtataaagattgtgtgtaggttttttgttttgtttgctggttgcatctggggtttgtttttcttttggtttcttggtggcttggatggatgagtaaaagtttctgctttttgagctgtgtttttgtgggttgaagctgtgataatacactagtggtagttgggctgttttagtgaggggggaaagatggtgcttttttttacctgcatgattgggtgttaaaagctggtgaggggtttaaccaactctttggatcccttactaaagttgccatttctttgtactagctggatttttacctgcttgcagggaggctcaaagattcggtccttaacttgccattccgtgcttatttcaggttggaaggagctgaaaagttgggggttttatggtgatgtgtggtactgtggagatcagctgaaagggacaagtgttgtgggtattagtggcagcttgttgtgagagccttctggtagatacactctacacttccagtccatttttgctgcaagaaatgcttcaggtgctgtgtctttgaggctcagtagcttccaatctttgtctggagagcagcaatggggattcttgggagttttttggtgctgctcctgcttgctgcccctgcatttggccagctaccttcacaggacatccttgcgctccttgctttcaagaagggcatcactcatgaccctgctggattcatcaccgattcgtggaacgacgagtcgattgatttcaatggctgtccggcttcctggaacggcatcgtgtgcaatggcgcaaacgtggcaggggttgtgcttgatggccatggcatctccggtgtcgccgatctgtccgtgttcgtcaatctgactatgcttgtgaagctctctatggccaataacaatctgtctgggagcctgccgagcaatgtgggtagtctgaagagcctgaagttcatggatatctcaaacaaccggttctcggggccgattcctgataacataggcaatctccggagcctgcagaacctgtcgcttgccaggaacaacttctcagggccactgcctgactccatcgatgggcttgcgtcgcttcagtcactggatgtgagtggaaactctttgtctggtccattgccttcatctctgaaaggtctccgcagcatggttgctctgaacctctcatacaatgccttcacaaagggcatcccatctgggcttggccttcttgtgaatctccaatctttggatctaagctggaatcaattggaaggcggtgttgattggaaattcttgattgagtcaactgttgctcatgttgacttcagtgggaacttgctcaccagtaccacccccaaagagctcaagttcctggcagatatttcagagacagttctatatctcaacttgagcaacaataagttgactgggtcattgattgatggagttgagctctcgacatttgggagattgaaggtgcttgatctgagccataatcagttatctggagacttgccagggttcaattatgtctatgatcttgaagttttgcgactggcaaacaatgcattcacggggtttgtacctagtggacttctgaaaggggattctctggttctcagtgagctggacctgagtgcaaataatctgactggtaatgagctctacctgaaaattgttcttcttacaccttttgttccttttctcttcataccatgtggatgcccattctgatttaaaaaaattggatgtggggctccttcacaaaaggtccagcctccaaaacagatcggtagtgttcagcttgcataaaactttgaatcggcatcttacattagtgttcttagttcattataccaattgattctctcatttcaatgatgtactgatctgttgattacattacacagcatggcatgagcttttactgatctgtggttgagtgtgcaccagtgtaggtcatttgattgttttgtcttatgccaattctatatttgcattcttcttgttttgcgtgaaaggttctttcttggaatctttgctcctagcctcctactgactaataattttctccaaagcaattactggatcagtgatggctagcttgtgatagttttggtcatgaagagagacgttatttattatgcatgcataccccaatggtattattgagaatatttgaaagtagtttgtgatggatttctgttccacagtaatgttaaatgcattgtgtagttgcagtgacagtacatgtatcttaacctttgttgttagatcttcacctttggatgttgtgaaaaatacaattattaataggacgcagctagttgtatatacctgactgggtgtatgagtaagaatactgaactgttgcatttcaaaatattatgtctcacagattatatcttgcatttgagtaaagtcatcactcctagaactcaatgcattcatcatagttatctaaattgttattaaaagagcaggacaactcaaacacgctcctatgttttctgtcatatcatgacatttctcttaaaacaaaagtatcacttttaagttccacttgtgttattttggactaacaatatttttcgttaatccacaggacacatcaatatgatcacatcgaccaccttgcaagttattaatctttcctccaatgctctctttggggatcttccaatgcttgctggaagctgcactgtgttagatctgtcaaataacaagtttaaaggaaatttgtcagttattgccaaatggagcaatgatttggagtatgttgatcttagccagaacaatctaactggaacaattcctgatgtgagctctcaattccttcgcttgaactacctgaatctttcccataattccctagctgacaccatccctgaagctgttgttcagtaccccaaactcactgtccttgatctcagctccaatcagttcagaggtcctattcctgctaatttactcacttcgtccatgctgcaagagctctacatccacgacaatatgcttagtggaggtctatcatttccaggatcatcgtcaaaaaatctgagtcttcaagttcttgatatttctggaaatcactttaatggcagcctccctgatgaaatagcatctttatctagcctccaagctcttgatatatctacaaacaatttctctggtcctttgccagcctctatcaccaagcttgcagcgctcactgctctcgacatatcaataaaccagttcactgggtcattgcctgatgcacttccagatacattgcaatcattcaatgcctcttataatgatctatctggtgttgttccagtgaacttgaggaagtttccagaatcttccttccatcctgggaactcgagactagactatcctgctagctcttctgggtctggcagttcctctggttcagctggtggcaggtcactcagtgcagcagctaaaatagcacttatagcagctagtatcgttgctcttgtcatccttatccttgttgccattgtttgccattacaagcaaatctcacggcagttccctagctcagaaaaggtttcagacaagaacctccacaagactagcaaagacatggccagtacaaaaggaaaggatgacaaaggtggtttggtggtctcagcagatgagcttggtgctcctcgaaagggctctacatctgaagcactaagccaagaagagaagctgtcaggtgtagggggattttccccatccaaaggtagccgcttctcttggtcaccagattctggagaggcatacacccaggaaggcctggcacggttggatgtcagatcacctgacaggttagcaggggagttgcacttcctggatgaaacaatcacactgacaccggaggaattgtcaagggcaccggctgaggttcttgggaggagcagccacgggacttcgtacagagcaacacttgagaatggtgtcttcctaacagtgaaatggctgagggaaggtgttgcaaggcccaagaaagagttctcgaaggaggccaagaagtttgcaaacattaggcatcccaatgttgttggcttgcgtggttactactggggtccaacagcacatgaaaaactgatcttgtcggattatgtttcaccaggaagtcttgcgagctttttgtacggtaatgctctcatttactggtttctcatttctgcaattgaacacatcaggcttagagatcttgtatactccatctgcaaatgcatgtgactggttggttaccaatatgttcagtctctaactaagctttatgttcctctgaaacctagcagatcgtccaggaaggagaggccctccactgacctgggcgcaacggctgaagatcgcagttgatgtcgcgcgtggcctgaactacctccattttgaccgagcgatgcctcatggaaacctcaaggctaccaacatcttgttggacggacttgacctcaatgcccgtgtcgctgactactgcctgcaccgcctgatgacccaggctggagttgttgagcagatcctcgacctgggcgtgctaggctaccgtgccccagagctagcagcgtccaagaagccatctccctcgttcaagtctgacgtgtacgccttcggtgtcgtgctgctggagctcctaactggcaggtgtgctggggatgttgtctcgggttctgaaggtggtgttgacctgactgattgggtccgtctgcgggtggctgaaggtcggggatcagattgctttgatccagccatggcttcagattctgagaaccaagtttctgtcaagggcatgaaggatgtgctgggcattgccttgagatgcatccggccggtctctgaaagacctgggatcaagtctgtgtatgaggatctttcatcaatctagtttagcctcattgtctctagcattagatggatactcttctgtgtgttgagttgagtgcattattttgactgaaaactctagtgtcgctgtagcaaatgcaagtgtatggttggcctcgccttgatgcctccaagttcatatggcatgtctcaattgctcaagtgtcaatgctgccttaattgtttacataattttctcttgcaagttagagttgcaaattagatttctctgtaaatccagtcacttgaatctgtgatttggttgtcagtgagtcgtactaaccaggacggtactgaacatgacggtactgtcagggacttgtacatctcatgtgatgtttgtccaatgtactggcaagaaataggattcatgttgaacatc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0145400, RefSeq:Os07g0145400