BGIOSGA007087

From RiceWiki
Revision as of 18:44, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA007087

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007087, complete gene.

LocusTag

OsI_05939

Ensembl Transcript ID

BGIOSGA007087-TA

Ensembl Protein ID

BGIOSGA007087-PA

Length

2340

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:3801594..3803933

Sequence Coding Region

3801594..3803933

Genome Context

<gbrowseImage1> name=IndicaChromosome02:3801594..3803933 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:3801594..3803933 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGTGGCCCACCTGTGGACGCCGTGGCTGCTGTTGCCGCTGGCGATCATCCTGCTGCCGCTGAACCTGACCAGCCTGCGCCGCAAACTGTTTTCCAAACCGGTGCTGCAGCGCTTTCAGCAGGTCATGCCGCCGATGTCTCGTACGGAAAAAGAGGCGATTGACGCGGGCACAACCTGGTGGGAAGGCGATCTGTTTCAGGGCAAACCTGACTGGCAGAAACTGCACAACTACCCGCAACCGCGCCTGACGGCGGAAGAACAGGCCTTTATTGATGGCCCGGTGGAAGAAGCCTGCCGCATGGCGAATGATTTCCAGATCACCCATGAACTGGCGGATATGCCGCCAGAGTTGTGGGCCTATCTGAAAGAGCACCGCTTCTTCGCCATGATCATTAAAAAAGAGTACGGCGGACTGGCATTCTCCGCCTATGCCCAGGCACGCGTGTTGCAAAAACTGTCGGGCGTATCGGGTATTCTGGCGATTACCGTGGGGGTGCCTAACTCACTGGGTCCGGGCGAACTGCTGCAACATTACGGAACGGAAAAACAGAAAGACCATTATTTGCCGCGTCTGGCGCGGGGCGATGAGATTCCCTGTTTCGCCCTTACCAGCCCGGAAGCGGGTTCCGATGCCGGGGCAATCCCCGATACCGGCGTCGTTTGCATGGGCGAATGGCAGGGCCAGCAGGTGCTGGGCATGCGACTGACCTGGAACAAGCGCTATATCACGTTAGCCCCAATCGCCACCGTACTGGGTCTGGCCTTTAAGCTTTCCGACCCCGAGCACCTGCTGGGCGAGAAAGAGGAACTGGGCATTACCTGTGCCCTGATCCCAACCAGCACGCCGGGCGTGGAAATCGGTCATCGCCACTTCCCGCTCAACGTACCGTTCCAGAATGGTCCAACCCGTGGGAAAGACATTTTTGTCCCCATTGATTTCATCATTGGCGGCCCGGAAATGGCCGGTCAGGGCTGGCGGATGCTGGTGGAATGTCTGTCCGTCGGCCGTGGCATCACGCTGCCGTCAAACTCAACCGGTAGCCTGAAAACGGTGGCACTGGCGACCGGCGCCTATGCGCACATCCGTCGTCAGTTCAAGCTGTCTATCGGTAAAATGGAAGGTATTGAAGAGCCGCTGGCGCGCATCGCAGGTAATGCCTATGTAATGGACGCGGCCGCTACGCTAATCACCACCGGGATTATGCAGGGTGAAAAACCCGCGGTGCTGTCAGCCATCGTCAAATATCACTGTACCCATCGCGCTCAACAGTCAATTATCGATGCGATGGATATCGCGGGTGGTAAGGGCATCATGCTGGGTGACAGCAACTTCCTGGCGCGTGCCTATCAGGGTGCGCCCATCGCTATCACCGTGGAAGGCGCGAACATTCTGACCCGCAGCATGATTATCTTTGGTCAGGGGGCAATTCGTTGCCATCCTTATGTCCTGCAGGAAATGGCCGCCGCCGCCAGCAACGATGTTGCCGCCTTCGATAACGCGCTGTTTAGCCATATTGGTCACGTTGGCAGCAACGCGACGCGCAGCCTGTGGCTGGGCCTGCTGGGCGGTCGCACCAGCGCCGCGCCAACCCGCGATGTAACGCGTCGATATTATCAGCACATGAACCGCATTAGTGCCAACCTGGCCTTGCTGTCAGATGTCTCTATGGCGGTCTTAGGCGGCAGCCTGAAACGTCGCGAACGGATGTCTGCTCGCCTGGGTGATGTGCTGAGTCAGCTCTACCTGGCGTCTGCCACTCTGAAACGCTATGACGATGAAGGACGCCACGAAGCCGATTTACCGCTGGTGCACTGGGGCGTGCAGGATGCACTGAATAAAGCAGAGAAAGCCATGGACGATCTGCTGAGTAACTTCCCGAACCGCCTGGTGGCTGGCGTTATTCGACTGATGGTGTTTGCCGGTGGTCAGCACTGCCCTGCACCGTCCGATCGTCTTGATCACAAACTGGCAAAAATGCTGCAGGTGCCTTCGGCGACGCGTACGCGTTTAGGTCGTGGTCAGTATCTTGCGCCGAGCCAGCATAATCCTGCAGGTCAGTTAGAGCAGGCATTGCAGGACGTGATGGCGGCGGAAGTGATTCACGACCGCCTGTGCAAGCAGCATAAAAAACACTTCTCATTCACCCGACTGGATGCGCTGGCTAAACAGGCGTTGGAACAGGGCTGGATTGACGACAAAGAAGCTGAAGTGCTGAAACGCGCCGAGCAGAGCCGTCTGCGTTCCATTAACGTGGATGAGTTTGAGGCTGATGCGCTGGCCGTGCCGGCAAAGCAGGATGTCTCAAAACCCGCCCGCCCCAGTGAGGCGGCATAA</cdnaseq>

Protein Sequence

<aaseq>MAVAHLWTPWLLLPLAIILLPLNLTSLRRKLFSKPVLQRFQQVMPPMSRTEKEAIDAGTTWWEGDLFQGKPDWQKLHNYPQPRLTAEEQAFIDGPVEEACRMANDFQITHELADMPPELWAYLKEHRFFAMIIKKEYGGLAFSAYAQARVLQKLSGVSGILAITVGVPNSLGPGELLQHYGTEKQKDHYLPRLARGDEIPCFALTSPEAGSDAGAIPDTGVVCMGEWQGQQVLGMRLTWNKRYITLAPIATVLGLAFKLSDPEHLLGEKEELGITCALIPTSTPGVEIGHRHFPLNVPFQNGPTRGKDIFVPIDFIIGGPEMAGQGWRMLVECLSVGRGITLPSNSTGSLKTVALATGAYAHIRRQFKLSIGKMEGIEEPLARIAGNAYVMDAAATLITTGIMQGEKPAVLSAIVKYHCTHRAQQSIIDAMDIAGGKGIMLGDSNFLARAYQGAPIAITVEGANILTRSMIIFGQGAIRCHPYVLQEMAAAASNDVAAFDNALFSHIGHVGSNATRSLWLGLLGGRTSAAPTRDVTRRYYQHMNRISANLALLSDVSMAVLGGSLKRRERMSARLGDVLSQLYLASATLKRYDDEGRHEADLPLVHWGVQDALNKAEKAMDDLLSNFPNRLVAGVIRLMVFAGGQHCPAPSDRLDHKLAKMLQVPSATRTRLGRGQYLAPSQHNPAGQLEQALQDVMAAEVIHDRLCKQHKKHFSFTRLDALAKQALEQGWIDDKEAEVLKRAEQSRLRSINVDEFEADALAVPAKQDVSKPARPSEAA</aaseq>

Gene Sequence

<dnaseqindica>1..2340#ATGGCGGTGGCCCACCTGTGGACGCCGTGGCTGCTGTTGCCGCTGGCGATCATCCTGCTGCCGCTGAACCTGACCAGCCTGCGCCGCAAACTGTTTTCCAAACCGGTGCTGCAGCGCTTTCAGCAGGTCATGCCGCCGATGTCTCGTACGGAAAAAGAGGCGATTGACGCGGGCACAACCTGGTGGGAAGGCGATCTGTTTCAGGGCAAACCTGACTGGCAGAAACTGCACAACTACCCGCAACCGCGCCTGACGGCGGAAGAACAGGCCTTTATTGATGGCCCGGTGGAAGAAGCCTGCCGCATGGCGAATGATTTCCAGATCACCCATGAACTGGCGGATATGCCGCCAGAGTTGTGGGCCTATCTGAAAGAGCACCGCTTCTTCGCCATGATCATTAAAAAAGAGTACGGCGGACTGGCATTCTCCGCCTATGCCCAGGCACGCGTGTTGCAAAAACTGTCGGGCGTATCGGGTATTCTGGCGATTACCGTGGGGGTGCCTAACTCACTGGGTCCGGGCGAACTGCTGCAACATTACGGAACGGAAAAACAGAAAGACCATTATTTGCCGCGTCTGGCGCGGGGCGATGAGATTCCCTGTTTCGCCCTTACCAGCCCGGAAGCGGGTTCCGATGCCGGGGCAATCCCCGATACCGGCGTCGTTTGCATGGGCGAATGGCAGGGCCAGCAGGTGCTGGGCATGCGACTGACCTGGAACAAGCGCTATATCACGTTAGCCCCAATCGCCACCGTACTGGGTCTGGCCTTTAAGCTTTCCGACCCCGAGCACCTGCTGGGCGAGAAAGAGGAACTGGGCATTACCTGTGCCCTGATCCCAACCAGCACGCCGGGCGTGGAAATCGGTCATCGCCACTTCCCGCTCAACGTACCGTTCCAGAATGGTCCAACCCGTGGGAAAGACATTTTTGTCCCCATTGATTTCATCATTGGCGGCCCGGAAATGGCCGGTCAGGGCTGGCGGATGCTGGTGGAATGTCTGTCCGTCGGCCGTGGCATCACGCTGCCGTCAAACTCAACCGGTAGCCTGAAAACGGTGGCACTGGCGACCGGCGCCTATGCGCACATCCGTCGTCAGTTCAAGCTGTCTATCGGTAAAATGGAAGGTATTGAAGAGCCGCTGGCGCGCATCGCAGGTAATGCCTATGTAATGGACGCGGCCGCTACGCTAATCACCACCGGGATTATGCAGGGTGAAAAACCCGCGGTGCTGTCAGCCATCGTCAAATATCACTGTACCCATCGCGCTCAACAGTCAATTATCGATGCGATGGATATCGCGGGTGGTAAGGGCATCATGCTGGGTGACAGCAACTTCCTGGCGCGTGCCTATCAGGGTGCGCCCATCGCTATCACCGTGGAAGGCGCGAACATTCTGACCCGCAGCATGATTATCTTTGGTCAGGGGGCAATTCGTTGCCATCCTTATGTCCTGCAGGAAATGGCCGCCGCCGCCAGCAACGATGTTGCCGCCTTCGATAACGCGCTGTTTAGCCATATTGGTCACGTTGGCAGCAACGCGACGCGCAGCCTGTGGCTGGGCCTGCTGGGCGGTCGCACCAGCGCCGCGCCAACCCGCGATGTAACGCGTCGATATTATCAGCACATGAACCGCATTAGTGCCAACCTGGCCTTGCTGTCAGATGTCTCTATGGCGGTCTTAGGCGGCAGCCTGAAACGTCGCGAACGGATGTCTGCTCGCCTGGGTGATGTGCTGAGTCAGCTCTACCTGGCGTCTGCCACTCTGAAACGCTATGACGATGAAGGACGCCACGAAGCCGATTTACCGCTGGTGCACTGGGGCGTGCAGGATGCACTGAATAAAGCAGAGAAAGCCATGGACGATCTGCTGAGTAACTTCCCGAACCGCCTGGTGGCTGGCGTTATTCGACTGATGGTGTTTGCCGGTGGTCAGCACTGCCCTGCACCGTCCGATCGTCTTGATCACAAACTGGCAAAAATGCTGCAGGTGCCTTCGGCGACGCGTACGCGTTTAGGTCGTGGTCAGTATCTTGCGCCGAGCCAGCATAATCCTGCAGGTCAGTTAGAGCAGGCATTGCAGGACGTGATGGCGGCGGAAGTGATTCACGACCGCCTGTGCAAGCAGCATAAAAAACACTTCTCATTCACCCGACTGGATGCGCTGGCTAAACAGGCGTTGGAACAGGGCTGGATTGACGACAAAGAAGCTGAAGTGCTGAAACGCGCCGAGCAGAGCCGTCTGCGTTCCATTAACGTGGATGAGTTTGAGGCTGATGCGCTGGCCGTGCCGGCAAAGCAGGATGTCTCAAAACCCGCCCGCCCCAGTGAGGCGGCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007087