Os07g0148400

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Revision as of 08:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0148400| Description = Chromo domain containing protein| Version = NM_001188127.1 GI:297725384 GeneID:9268521| Length = 5040 bp| Definitio...")
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Gene Name

Os07g0148400

Description

Chromo domain containing protein

Version

NM_001188127.1 GI:297725384 GeneID:9268521

Length

5040 bp

Definition

Oryza sativa Japonica Group Os07g0148400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:2534858..2539897

Sequence Coding Region

2539463..2539783

Expression

GEO Profiles:Os07g0148400

Genome Context

<gbrowseImage1> name=NC_008400:2534858..2539897 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:2534858..2539897 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaccagaggaggtggttcctgttcaagttctcgcccggcgagtttcgaagaaaggagctggagctgtggaacaagtcttggttcgttggacaggtcaatcatcaagtgaggctacctgggaagatgctgcggctttgcgtcttcgatttccggatgcgccggcttgggggcaagccgctttcgaagggggaaggaatgttacgggtgctgctactgtatctgaaccggtaagggagaataatcctgtgaagtctgggaaacgacctcaaagggagagaaggccgaatgtccgagtctctgggccggagtggtcttag</cdnaseq>

Protein Sequence

<aaseq>MAPEEVVPVQVLARRVSKKGAGAVEQVLVRWTGQSSSEATWEDA AALRLRFPDAPAWGQAAFEGGRNVTGAATVSEPVRENNPVKSGKRPQRERRPNVRVSG PEWS</aaseq>

Gene Sequence

<dnaseqindica>4606..4926#actgctctttcccctgctccaagtatttctctctcgttctgctctctgttcatcctcttccttccaaaatccccaaaatctctagcccgatcgtaacattaggtatcagagccaccaatcttggagtatctagagaaaccacgctatcattcgcgagctcaactcaaatcccaggagatggagcaacaattggcggaacttgtggaggtcatgtctgcgattcagaagcagaattcggcgattcaaacttcggttggatcgctggaggagatcaagcccctggtggtggagttagcgagttggaagccggcgatggacaaggcggtgacagagctgcatgaggagatgggggatctgcgccaacaagtggagcggatagcccgtaatccggtgctctccgtcaagccatcggagttgccggcgctgcttcctacaccgactcggcctcgggataccgctcccaaggaggaggaggtctctccaagtgtgggtggcgaaggtcacgggccgttaggccaccgcgttgcttcgattccacgggggaaggcgtgtgggaaggagtcctctccatcgtctctcccggccaagggtacgtgctctaatcagttgccccaccgtttttctctggaatttggagagggttcgaatcggggttttactgcggggtttcacggaggaaacgctcgggtagattgtccacagtttgatggggagaaccctagagcctggaaaatgaagtgcgaaacctatttccgtgtgagtggaatttgctctgaagtgtgggtaggtgttgcttctttgcaattttccgggggggggggggggggctttgacttggcttcaatccacaaatgctcatgttgaatttatggattggagtgagttttctgagctagtgtgtgcaaaatttgggagagatgagttccagggcttagtgcgtcaatttaacaggctcaagcagacatgttcggtgcttagcttagttatgcggagaggtttaatgagttaatgcaccagtttcacgctcatcattcctcttgggattccatgttttttttactcaattcatagatgggttgcgggcaaatattcatggtgctattcttttacaccgtcccacggacatggatactgctgtggatctcgcttgcctgtaggaggaagtactggaatctgctcgataggaggctatgacgagttaccgagctacggcccgttctgctacaccgtcgtttgcttccaagacatttggtggtggccgagctgatgaacggacactgccagtggaagataaggtagctgccctgagagcttatcgcaaagcaaagggattatgccatacatgtggggaacggtggagtcgcgatcacaagtgtggacctactgttcagttgcatattgtggaagagcttttggaattgttagctgattctgctgctgatggtatgcctgagattattgaaccaactactgacattgggtctgagtctgaacctcaaggcgaagtctgtcagatttctcgtgatgctatgattggtacgaaatctgtctgtacgcttcgattgcaaggacttattcagcagtaagaaattctcatgttagtgaactctggcagcacgcatagttttatgtctgaaaagctggctggcaagttgaactgtaagctgcgtgttgttcctgctattcaagtcaggattgcggatgggggtatactgcactgctcaagggagttgacaaattgcctttggtgggtgcagggtttctcctttcaatccaatttcaaggtgctgcctctgggaagttatgacataattctcggcatggattggttggttgaccatagcccaatgcagattgactagcgaagcaagattttgcaatttcagtatcaacaacagaatgtctgtctgaagggtgtggttgctaatactcagaaatgctctgaactttcggttgttcaggtgcagggcttaatgaatcatgatgcggttttgtagactgttgagttatgtcctctagaagattcagattcctctcttgaaataccagccgaaatttctcagctccttcatgagtcaatcttcatccctaccgttataacccagcccagaaggatgagattgaacggcaagtgaaggatatgctgcagcagggagttattcaaccaagttcaagtcccttctcttctccggtgctgttggtgcagaaaaaggacctcacttggcagttttgtgttgactgccgtcacctgaatgctgttacagttaaaaatcgctatccccttccaatcattgatgaattattggacgaattgtcaggtgctagtctgtttaccagcttggatctgcgcgcggggtatcatcagattagaatgcgagctgaagatgagtataagacggcgtttaaaacgcataatggtcattatgagtttcgggttatgtcctatggacttacaggagccccggccacttttcaagggttgatgaacatgatttttgcaccgttattgaggaagggagttttggtgttcattgatgatatattggtgtacagtcgtaatttgcaggaccatgtcatgctgttgcgtcaagtgttctagctattgacgactcaccagttaaaggtcaaacgatctaagtgttcgttcgctcaatccagccttacttatttgggtcatgtgatcagcgctgcgggtgtaactactgatccgaagaatgtcagggctgttcaagcttggacagtgccgcagaatgttaaggaagtccggagtttcttgggacttgccggatattatcacaagtttgtcaagtcttttgggatcatcagtcggcccttaactgatttgttaaaaaagtaggtggtcttcgtttggacttcagaacatcaagctgcatttgaagctcttaaggctgctttggtttctgccccagtgttggcgttgcccgatttttctgggacctttgtaattgagactgaagcttctgatttgggggtgggtgcggtgttaatgcaggatggacatcccttggctttccttagcaaatccctgggtccacgcaacagaggcctgtcaacttacgaaaaagagtgtctcgctatattgctggctgttgatcattggcgctcttatctgcagtttggtgagtttatcattcgtacggatcagcgcagcttgattcatcttgatgatcagcgtttggtgacatcttggcaacaacgagcattaaccaaattacttggcttatcttaccggctggtatacaagaaaggtcttgagaataaggcagctgatgtgttgtctcgttgcagatccaatgaggtgtatcaattgagtactgtgtcatcttgcgtgccctcttggttggaggaagttcagaagggttatgattctgatatttgcacttctcaattgctcgctaaagtgttgctctctcctagtcaatttccttcttattctctgaagaatggtattctctattatatgaggctcatttggctgggtgcaaactctgaattgcaacttaaaattctgtctgctttccattgctctgccgtgggtgggcattctggtatacaagttacttacagcagagtgcggcgcttgtttgcatggccgggtttgaagcaggccgttcgccagtttgtgtccaactgttcgatctgtaagcaagcaaaagctgaacgtgtgcgttaccccggtcttttgcaacctctacctgtgccggagcatgcctgggtaactgtttcacttgattttattgaagggttgccttcttcagcaggttttgactgcatactggtggtcgttgataaattcagtaagtatgcccatttcctggctttagtgcacccattcaccgcttttgatgttgctttggcttatctgaacaatgtttataaactttatggattgccacatcatatcatttcggacagagtccgtatttttaccagcgccttgtggacagagttatttcagttgacggatactcgtctgaagttaagtactgcttatcacctacagacggatgggcaaacggagcgtgtcaaccagtgtttggagacatttctccgctgttttgtgcatgcctgtccaaagaagtggttccgttggtgggctttagcagaattttggtataacactgcttatcattcagcgcttgagaggtctccatttgaggtactttatgggcatcctcctcgtcattttggggtgtcgagtacagctgaatgtgcagttccagatcttgacaagtggctgaaggaacgggcagtaatctccagtttgttgcgtcagcatcttttacgagctcagcaacgaatgaaatttcaggtcgacaagaagcgttctgaccgcgagttcgctacgggagattgggttttttgaaggctcaaccttatgcacagagttctcttaccgggcataccaatcacaaacttgcttttcgctatttcggaccttttcaggtactgaataaggtgggagcagtggcttatcgactacgattgccggatgattgctcgattcatcccgttgttcatgtctcccaacttcgacaagctgtggcaccaaccactgcgactgatgttcgtgctcttcctaccatggcaccagaggaggtggttcctgttcaagttctcgcccggcgagtttcgaagaaaggagctggagctgtggaacaagtcttggttcgttggacaggtcaatcatcaagtgaggctacctgggaagatgctgcggctttgcgtcttcgatttccggatgcgccggcttgggggcaagccgctttcgaagggggaaggaatgttacgggtgctgctactgtatctgaaccggtaagggagaataatcctgtgaagtctgggaaacgacctcaaagggagagaaggccgaatgtccgagtctctgggccggagtggtcttaggccagctgtatgccgtgcatgtatataagcacaggtagagagaggaaaggatatcaaatatttgagctgtaaacttgaaaccaaactctgtctctactgctctttcctctgctc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0148400, RefSeq:Os07g0148400