Os07g0152000

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Revision as of 08:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0152000| Description = TCP transcription factor family protein| Version = NM_001065440.2 GI:297606748 GeneID:4342416| Length = 5374 bp| De...")
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Gene Name

Os07g0152000

Description

TCP transcription factor family protein

Version

NM_001065440.2 GI:297606748 GeneID:4342416

Length

5374 bp

Definition

Oryza sativa Japonica Group Os07g0152000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:2783365..2788738

Sequence Coding Region

2783596..2784933

Expression

GEO Profiles:Os07g0152000

Genome Context

<gbrowseImage1> name=NC_008400:2783365..2788738 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:2783365..2788738 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagctcgccggcagcaacaacaagcgggggagggtgagggggcccaacgacgacgacgacgacgccggggagccggacgccaagcgccatcaccaccagctgctgttgccgtggccgcagcagcagcagcagcagcatccggcgtcgcggatctaccgggtgtcgcgggcctccggcgggaaggaccgccacagcaaggtgtacacggccaagggcatccgcgaccgccgcgtccgcctctccgtctccaccgccatccagttctacgacctccaggatcgtctcgggtatgaccagccgagcaaggccatcgagtggctcattaaggccgccgccgccgccatcgacaagctcccttcgcttgataccgcttccttccccaccaaccccgcctcctccgccgctgttgctgctgctgctgctcctcctcttccccatgccgaacgcgagcagcagcagcagctcaccaagtccggatgcagtagcacgtcggagaccagcaagggctccgtcctctccctctcccgctccgagagccgcgtcaaggccagggagcgcgccagggagcggagcagcgcggccgccgccgcggcatccaaggacgccggggacgacgccgccacccccaccgcgcccaccgccgcgcccgcctcctcgcaggcggcttccttcaccgagctactcaccgggatggccgcagccaacgcctcacccgctgaccacaagcagcagcaggcgtggcagccgatgaccgtcgccgcggccaccgccgactacatcggcttcgccgccgccgccgcgccgcatacgcagccgcggaaatccgccgcgggccatcactccgcgatgccgcacaccttcgcatcacccgctccccacctcgccaacatcacccccatcgccatggcgcccgcgcagcacttcaccctcacacccgccgccgccgagcaccacgcggagatgacgcactactcgttcgaccacttcatgcccgtccacgcggcagcagcggcggcggcggcggcctccaccccggccggcggcgactacaacctcaacttctccatgtcctcgggtcttgtgggtgtccacagtagggggacccttcagtccaattcgcagtctcacctctccagccatcaccaccaccatcaccagcaacagcagcagcagcagcagctgcagaggctgtctgctccgctggatgcgcccaacattccgttcctcttcagcccggccgccgcgcccaccgccgcggacacccagttcgccgccgcattgcagctctgggacgggttccggcacgccgacatcaaggagaagggcaagcactga</cdnaseq>

Protein Sequence

<aaseq>MELAGSNNKRGRVRGPNDDDDDAGEPDAKRHHHQLLLPWPQQQQ QQHPASRIYRVSRASGGKDRHSKVYTAKGIRDRRVRLSVSTAIQFYDLQDRLGYDQPS KAIEWLIKAAAAAIDKLPSLDTASFPTNPASSAAVAAAAAPPLPHAEREQQQQLTKSG CSSTSETSKGSVLSLSRSESRVKARERARERSSAAAAAASKDAGDDAATPTAPTAAPA SSQAASFTELLTGMAAANASPADHKQQQAWQPMTVAAATADYIGFAAAAAPHTQPRKS AAGHHSAMPHTFASPAPHLANITPIAMAPAQHFTLTPAAAEHHAEMTHYSFDHFMPVH AAAAAAAAASTPAGGDYNLNFSMSSGLVGVHSRGTLQSNSQSHLSSHHHHHHQQQQQQ QQLQRLSAPLDAPNIPFLFSPAAAPTAADTQFAAALQLWDGFRHADIKEKGKH</aaseq>

Gene Sequence

<dnaseqindica>232..1569#atttcaattttccttttcccctcataaaatcactctccctcttctctcttcctcttctccccccaaaaacctcgcctccgcccgatcgcctcgccgccttaacccccacccccgatctccttcctcaccgacgacgcgcgccccactccccccacctcaatgcgcgcttcctagggcatatgaccggtactacgacaaccatcacctctcgccgtcaccgtcatcgtcgggatggagctcgccggcagcaacaacaagcgggggagggtgagggggcccaacgacgacgacgacgacgccggggagccggacgccaagcgccatcaccaccagctgctgttgccgtggccgcagcagcagcagcagcagcatccggcgtcgcggatctaccgggtgtcgcgggcctccggcgggaaggaccgccacagcaaggtgtacacggccaagggcatccgcgaccgccgcgtccgcctctccgtctccaccgccatccagttctacgacctccaggatcgtctcgggtatgaccagccgagcaaggccatcgagtggctcattaaggccgccgccgccgccatcgacaagctcccttcgcttgataccgcttccttccccaccaaccccgcctcctccgccgctgttgctgctgctgctgctcctcctcttccccatgccgaacgcgagcagcagcagcagctcaccaagtccggatgcagtagcacgtcggagaccagcaagggctccgtcctctccctctcccgctccgagagccgcgtcaaggccagggagcgcgccagggagcggagcagcgcggccgccgccgcggcatccaaggacgccggggacgacgccgccacccccaccgcgcccaccgccgcgcccgcctcctcgcaggcggcttccttcaccgagctactcaccgggatggccgcagccaacgcctcacccgctgaccacaagcagcagcaggcgtggcagccgatgaccgtcgccgcggccaccgccgactacatcggcttcgccgccgccgccgcgccgcatacgcagccgcggaaatccgccgcgggccatcactccgcgatgccgcacaccttcgcatcacccgctccccacctcgccaacatcacccccatcgccatggcgcccgcgcagcacttcaccctcacacccgccgccgccgagcaccacgcggagatgacgcactactcgttcgaccacttcatgcccgtccacgcggcagcagcggcggcggcggcggcctccaccccggccggcggcgactacaacctcaacttctccatgtcctcgggtcttgtgggtgtccacagtagggggacccttcagtccaattcgcagtctcacctctccagccatcaccaccaccatcaccagcaacagcagcagcagcagcagctgcagaggctgtctgctccgctggatgcgcccaacattccgttcctcttcagcccggccgccgcgcccaccgccgcggacacccagttcgccgccgcattgcagctctgggacgggttccggcacgccgacatcaaggagaagggcaagcactgatcagatcagcagccgcgggcatcgacggcgacgtctcttcttggatggtaaggggccatgaactgatctccactctcccccaattgcttcatgttcagctttgcttgctttttggcagcttgtgccttgggggaatttgtttaagcccccaattgcgaatttgatatggtttaatctccaacttttggtggctctcgaggtggccttgtgtccctcaatcgcacaaaacactcgggctgttcttgagcaattgacgagtgtctaagctttagggggagggagcattcagctcaacccttttacaacaggtgtcgatgcactactcaccgggctgggatcttgcttcttgttctgttcccccccaacaattatttcataggagacaggccaatcgcacggtttctgcttgcccggcattggatttttaatgccttaatttgttgtaaccacaccctccctacgttggggtagtattgctattgcatggatggaagggatgatgcatctgtattgtcaaatgcttgaactgcaaatacagaatggatggagaaaaataccctgtagtctaagctgtttcctagtgttcttttgataggcattggctttgttgagaagtggacgctaacccccaatgtctattgtctttagcaagaactagaaaattttcagaagagctcggagctgaatatgcagctcagcgtagccaaaacaagttcctgttcatgccattttaacaagtagtattttggttgttgtgcttgatgtttgtttctgctttactactagttactagcagttagcacacagagttgtgtgccaccaccaagtcaatgcattcaatgccttgcctgaaggatacaactagaactttttcttggattgcatagttttgtctagctagaaaatgtagcaagctcaaatcacttaggaagaaatacctcctaagcagtacagcttcatgaggtcattttcttttatcaggtcatatctttttctaagatagtttcatttattgttgggagtctagatgtttactgacttagttcgtcaatagtagagatggagaataaggcatgtgcaatatatgtgttgttgaactatcagtgctagactgctagtgatggagttaaggtgctaaagtcttgaggagttatcttaacatcttttcaatgaaaagagaaaactgcgaacgatgcgacttcacaaaaaagaaaagaaaatatcagaggaagctaatccatatgcatctaccgatgttgtaaaaaataagtgcacacgttttagcgctgttgctttaactgtgaagtgtttcctcaaaaaacatctaatggttgacacttaggccgagtatgggacatctatctctgtcaaactcaaaggtgccatggggccaagcaatcaaacatcagtctatatcaaattctaagggcaaaccatacatcaaagcatactattagcgataattgacaaatgactgtgatataagcatgctgttcaagatttggttgccctttaactggatgtgaacttccaaggacccatcagggagcactgaaaatcgtacatattatagtttctgagtagttatattcacttacatatcgcagtatcagtagataattcacaccatgttaagtcatctttacagggacttacatagtatttcatgatcagctctcgtaataacccttaagctagcgctcaatttggaaatttaggctgtgagatctgaatgttcatatagaactattctttcgttgaagtaattttatacatagctagttcccttttttattcaaagttaatagcagaaggaagttcttttcatggtccttcagacttaaaaagggaacaaatcatacaaagtacaacagctatgcggttaaaagctgaattgcgtcgttgcagttaacacccagtggttatagttatgttaagatttgtgtaattctcttctggaaaaacatgttcttagatctgggttagcgaaaatcattctcagtagttaatccctcaagtattaatacattatggattatgttgataatcattagatagttgattgtcatggaagacattctcagaatttgcgtcatgttcctaggtgatattctaaaagacttcattgtcaggatcatgtttcctaaattttgccttaatctttatgtaactcagccctttctgttcctcaccaactaacatgtgctacatgtaccttttgtcatatttgataggaaaatgtgagaagtgccactgtgaagtagtatgttgtatcatgaaatggttgagattttcttttgtgtagaagagtgctcaaatattatgctttcctttattgatgctttctagcgctaaataaaactaaacccgtatcccgtatgccatattgaattttaagtgcttcgtatttcaggaaagttatctcagctggaatactgtgtacatgatacaaagctgagattttaaacagtatactaccttaagactagtttatcacaaagataagcaccagagtagccaaaaggtgcctttttttattgttttgtagcttagctataactttggtctaactactgcttttccatgtaagttgtatatattaagataagcttgaaatacatcaacatgcttgtgaattgactattgagtttacaaaaaataacttttagtacttagacccagtaatcaaactaatacaataagcctaagttagcacaatcttgttcatgggccattattacaaagcttgaatgaatgtctctagcacttcctaccttttactgcccaagaactgtcatatgtttgacatgatttctttgtttgtcaaataaaatgatttggatccttgcgttatagttgctaggattagaatctgttgtctcaaaggtctttagtacatgtggtttactatgttcttctagagtcctggaatataaatctactcaatagaccaggaaaaaaaagcattatgattaacatcaatccgacaggtgagatgaagctggggttttattgtcttctctgatagaatcattccagaaggatcagttaactcaccaatatagtaggcaacttatgctgctactgtgattaataatatgaaagtgcttcatcaagaaaactagaatgaccaaaaggtgctctgctaaaacagtttggtccagctgtccattttttttaaagcaaaagtttataggctggcctactatatgtctatatctcagcctctgtccatctgtcagcaatgccacactattggagtgacagatctgggaatatatagacacagtattacccattgtttcgtaacatcagtttaaagattgcgcgctaccttttaaggttaagtttagtagaatttgcacatagtttgacaagtaacttgtatttcttctgatggagattttcattcttgattatttacaggaagtgaaaacatcaaaacgttgcaagccattcctgtgagcaacatccacagcttgaagctgccataagtgaatgctggatgcattctcggaagtagagcatcaactgcacatctaccttggtcacgggaggacctcatcatcgctattcagatgatcttgtgcttttctctgcctgttgttgtattcattttgttgagttgagaatttgggagcattactcgccggagtgccctgaggaggggacgcccttgtaatcctttctgttgtaaactatgtcaatggatgcatgcggctctggactggattggttctttgcctcttttgacactgtgagatcggttgcctgtcaattttattgttctcggttgtgagagaag</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0152000, RefSeq:Os07g0152000