Os07g0152900

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Revision as of 08:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0152900| Description = Similar to Glycolate oxidase (EC 1.1.3.15) (Fragment)| Version = NM_001065444.1 GI:115470620 GeneID:4342420| Length ...")
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Gene Name

Os07g0152900

Description

Similar to Glycolate oxidase (EC 1.1.3.15) (Fragment)

Version

NM_001065444.1 GI:115470620 GeneID:4342420

Length

3632 bp

Definition

Oryza sativa Japonica Group Os07g0152900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:2829843..2833474

Sequence Coding Region

2830475..2830614,2831180..2831304,2831510..2831556,2831672..2831749,2831838..2831962
,2832116..2832182,2832266..2832328,2832488..2832557,2832642..2832742
,2832837..2832941,2833023..2833211

Expression

GEO Profiles:Os07g0152900

Genome Context

<gbrowseImage1> name=NC_008400:2829843..2833474 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:2829843..2833474 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggagatcaccaatgtcacggagtaccaggccatcgcgaagcagaagcttccgaagatgatctacgactactatgcatctggggccgaggacgagtggactctccaggagaacagggaggccttcgccaggatcctgtttcgcccacgcatactgatcgacgtatccaagattgacatggccacaacagtcctggggttcaagatttcaatgcccattatgattgctccctctgccatgcagaagatggctcacccagatggagagtatgcaactgcgcgtgctgcatcagcagcgggcactataatgacattgtcatcatgggctacttcaagcgttgaggaggttgcctcaactggaccagggattcgtttcttccagctttatgtttacaaagacaggagggtggtggagcagcttgttaggagagctgaaagggctggattcaaggcgattgcgcttacggtggatactccgcgacttggccgtagggaggctgacatcaagaacaggtttgttctgccaccatttttgacactgaagaactttgaaggcctggagctggggaaaatggaccaggctagcgattcaggactggcttcttacgtcgccgggcaaatcgatcgcaccctgagctggaaggatgtgaagtggctgcagaccatcaccacgctgccgatcctggtgaagggagtgatcactgcagaagacacgaggctcgccgtggagaacggcgcggccggcatcatcgtgtccaaccacggcgcccgccagctggactacgtcccggccaccatcagcgccctcgaggaggttgtgaaggcggctcgcgggcagctccccgtcttcctcgacggcggcgtccgccgcggcaccgacgtcttcaaggcgctcgccctcggcgccgccggcgtcttcatcgggaggccggtggtgttctcgctggcggcggcgggggaggccggagtccggaacgtgctgcagatgctccgcgacgagttcgagctcaccatggcgctcagcggctgcacctccctcgccgacatcacccgcaaccacgtcatcaccgaggccgacaagctcggcgtcatgccgtctcgcttgtaa</cdnaseq>

Protein Sequence

<aaseq>MGEITNVTEYQAIAKQKLPKMIYDYYASGAEDEWTLQENREAFA RILFRPRILIDVSKIDMATTVLGFKISMPIMIAPSAMQKMAHPDGEYATARAASAAGT IMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRRVVEQLVRRAERAGFKAIALTVDTP RLGRREADIKNRFVLPPFLTLKNFEGLELGKMDQASDSGLASYVAGQIDRTLSWKDVK WLQTITTLPILVKGVITAEDTRLAVENGAAGIIVSNHGARQLDYVPATISALEEVVKA ARGQLPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAAGEAGVRNVLQMLRDE FELTMALSGCTSLADITRNHVITEADKLGVMPSRL</aaseq>

Gene Sequence

<dnaseqindica>633..772#1338..1462#1668..1714#1830..1907#1996..2120#2274..2340#2424..2486#2646..2715#2800..2900#2995..3099#3181..3369#aagtgaattttcttttctggggctggaagagcaggaatggaggtgcaggagaggatgaggaagcagtgtaggagagccatcctctctgcacacctccaatagctcatccaaacaacagctatctcactctccctccatgtctctacactctagcaattcaacaattattttcctttgttttgtcttcatctacaaatgcttggtcatcaccctcatctcttatattactctcacttccaccacaccctccatttcttgcttccatttgtcttgcttggctcttcactctccccctgttcctgcaggggtcaggcactgcctgctacaaggtaaaaaactcactggagattaagaacaattattaatttcattcttgattcagtacatggtccaatttacatgctctattgaattgatggtgtcttaatttggaaaacattttgcatggatggatttcaacaagtgttctgatgatgaaagcctgactgttctttactttcttcagacaaagaatccacttgcatgtagtagagggatttgaagttattcttatgttttcttggttaaatcaagcagctgttttcttgtttggtccagagtggtgtaggtgattcggctagctcagcgcgaagatgggggagatcaccaatgtcacggagtaccaggccatcgcgaagcagaagcttccgaagatgatctacgactactatgcatctggggccgaggacgagtggactctccaggagaacagggaggccttcgccaggatcctgtaagtattcaatgttcttttttgctatgttacagctcctgccactgttacacttttgtgcatggttttttcttgtgggagtgtatgtgagaagtgtaaaatagctgggccttaagtattgtttggtaatcagcctttaatacacattttttgggtaaattttacttccctaatccttttggggtaaatttttagtggttatttgtgagcaataacatgtttgttgatgcagttttggttctatgcttggtataaataattgttctcttattatactgaattttctattgtatttgattcacctaacataacattatcgaaaaaattaaaaaaaaaagccagcatgttcatcgttcttcgacaactttcatttgtcatagttgatcctgaaaatccattctcataccataccataactaaatgtttcatgttgctagatactgaagaacagatgtggttttcctgtttatgtacagttggttgctcaaataatttatcagtacaaatttttgcagcttcatcattagttcattacccatctcctcatatgttctgttttggccaggtttcgcccacgcatactgatcgacgtatccaagattgacatggccacaacagtcctggggttcaagatttcaatgcccattatgattgctccctctgccatgcagaagatggctcacccagatggtatgcttttgtgagattttcatttggttttgcttaatcatgttagagtaatagagctatatgtctaacacaaaaggatatcatgttagagtaatccataaataactgaagctgctgaacttttcaaagcaacatgtaaattctttctgctttgcctaccatgtacaatagagctaatattggtccaatctttatattgattcaggagagtatgcaactgcgcgtgctgcatcagcagcgggcactataatggttggtcgatgttccaatggatcacaaatagaattctacttatgaaattaatcaatccagttaatgacactgaagtactgaacacaaccttgtgccctttttttttaatcttcagacattgtcatcatgggctacttcaagcgttgaggaggttgcctcaactggaccagggattcgtttcttccagctttatgtaaacacactacacaatctctgctaatactattagtttcttcgtttgattgtccttatcaaggatcatgtaccttggatctctgtaggtttacaaagacaggagggtggtggagcagcttgttaggagagctgaaagggctggattcaaggcgattgcgcttacggtggatactccgcgacttggccgtagggaggctgacatcaagaacaggtgccctccatcttttccatggactgaacacaccagttatatcttctgcattacaaaaatgagcatgggaagcatacactgaaatgagcaaacataagatcccacatgtatcaggatttgaaacaagcagcctgtctgtggatgttgttgcaggtttgttctgccaccatttttgacactgaagaactttgaaggcctggagctggggaaaatggaccaggtgaaactcatctctcagcacacatcgtggacaccatgttcctctaatctctcatggaactaatctcccattctgatgatcaggctagcgattcaggactggcttcttacgtcgccgggcaaatcgatcgcaccctgagctggaaggtagcatcacgccattgccagtcctgtttatctgcttctctgatcgaatttactgacatgaagatgacaatagctgcttgattacttgttcatcactgtgatcaactgatgaatcatatatcaaatgttaaacaatgatgtgaattatattttgtgcaggatgtgaagtggctgcagaccatcaccacgctgccgatcctggtgaagggagtgatcactgcagaagacagtaaagccattgcctcatctctacattacatgctccgatcattaactcgaatgcaaagccactgacagtgtgatcgaattgcagcgaggctcgccgtggagaacggcgcggccggcatcatcgtgtccaaccacggcgcccgccagctggactacgtcccggccaccatcagcgccctcgaggaggtactcgatcatcttcaacctcgcatcgatggtttctgcagattcgatcagtacagtacagtgatcgatctctttggttttcggcggtgtgcaggttgtgaaggcggctcgcgggcagctccccgtcttcctcgacggcggcgtccgccgcggcaccgacgtcttcaaggcgctcgccctcggcgccgccggcgtcttcgtgagtacaccggcgaactagcaaatccatcaatgattgcgagaggtgaattctcaactggtcgatttcgtgttcttgcagatcgggaggccggtggtgttctcgctggcggcggcgggggaggccggagtccggaacgtgctgcagatgctccgcgacgagttcgagctcaccatggcgctcagcggctgcacctccctcgccgacatcacccgcaaccacgtcatcaccgaggccgacaagctcggcgtcatgccgtctcgcttgtaaacaacaacgacggcgaacttgtcgccgtcgatcgatcaccggccggccgccgcgacacgctttgccggccgacggatgatcggccgggaatgaagaagaaggtagtagctgccgaagaaaagattggaagatgcaaagttctataattttggatgatgctgcgtcatgtacttttgttaattgtcgagtgattgatcacctgtacctaattaaatggtttattggattattggcggtttatactaaacgaacaaattaatacc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0152900, RefSeq:Os07g0152900