Os07g0154100

From RiceWiki
Revision as of 08:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0154100| Description = Similar to Viviparous-14| Version = NM_001065448.1 GI:115470628 GeneID:4342424| Length = 2144 bp| Definition = Oryz...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0154100

Description

Similar to Viviparous-14

Version

NM_001065448.1 GI:115470628 GeneID:4342424

Length

2144 bp

Definition

Oryza sativa Japonica Group Os07g0154100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:2902838..2904981

Sequence Coding Region

2902840..2904705

Expression

GEO Profiles:Os07g0154100

Genome Context

<gbrowseImage1> name=NC_008400:2902838..2904981 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:2902838..2904981 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cacctcacctcacctcctcctccacctcctcgaaattattcgaatccatctccttctccctcctcccaacccgcgccaaatcgatcgatcgcgagcgatcttggccgcgtctcaccaatggcgtcctccgcgccttccgcccccggcctcgcgccggtcgccaagccgccgccgccgccgtccaaggtgaaggtggcgacagcaaccgtgccaaccaatggcaagatcaagcagggtgcgaggccaatgcgtgtctcggcgccgccggtggagccgcggcggcggatgaacccgctccagcggctggcggcggcggcgattgacgccgtggaggaaggcctcgtcgccgggttgctcgagcgggggcacgcgctgccgcgcaccgctgatccggccgtgcagatcgccgggaactacgcgcccgtcggggagcgcccgccggtgagggggctgccggtgtccggccgcctcccggcgtgcctcgacggggtgtacgtccgcaacggcgccaacccgctccacgcgccgcgcgccgggcaccacctgttcgacggcgacgggatgctgcacgccgtgcggctcgccggggggcgcgccgagtcgtacgcgtgccggttcacggagacggcgcggctgcggcaggagcgggagatgggacgccccgtgttccccaaggccatcggcgagctccacggccactccggcgtcgcgcggcttctgctgttcggctcgcgcgcgctctgcggcgtgctcgacgcgtcccggggcatcggcgtcgccaacgccggcctcgtctaccacgacggccgcctcctcgccatgtccgaggacgacctcccctaccacgtccgtgtcacccacgacggcgacctcgagaccgtcgggaggtacgacttccatgggcagctcgacgccgacggcaccatgatcgcgcaccccaagctcgacccggtcaccggcgagctcttcgcgctcagctacaatgtcgtgtccaagccgtacctcaagtacttctacttcaccgccgacggccgcaagtcccgagacgtcgacatccccgtcggcgcgccgacgatgatccacgacttcgccgtcaccgagaactatgccgtcgtccccgaccagcagatcgtgttcaagctccaggagatggtgcgcggcggctcgccggtggtatacgacagggagaaggcgtcgcggttcggcgtgctcccgaagcgcgccgccgacgcgtcggagctccggtgggtggaggtccccggctgcttctgcttccacctctggaacgcgtgggaggacgacgccaccggcgagatcgtggtcatcggctcctgcatgacgccgccggacgccgtgttcaacgagccgtcgcagtcgccggaggaggagagcttccgcagcgtgctctccgagatccgcctcgacccgcgcaccggcgtgtcgcggcggcgcgacgtgctgcgcgacgccgccgagcaggtgaacctcgaggccggcatggtgaaccggcagctgctcggccggaagacgcggtacgcctacctcgccatcgccgagccatggccgagggtgtcgggcttcgccaaggtggacctcgagagcggcacggcggagaagttcatctacggcgaggggaggtacggcggcgagccatgcttcgttccgcgcgccggcgccgcggcggaggacgacggccacgtgctgtgcttcgtccacgacgaggagcgcggcacgtcggagctggtggtggtggacgccggcagcgaggcgatggaggaggtcgcggccgtgaagctgccggggcgcgtgccgtacggattgcacggcaccttcattggcgccaacgagctgcagcgacaagcttag</cdnaseq>

Protein Sequence

<aaseq>HLTSPPPPPPRNYSNPSPSPSSQPAPNRSIASDLGRVSPMASSA PSAPGLAPVAKPPPPPSKVKVATATVPTNGKIKQGARPMRVSAPPVEPRRRMNPLQRL AAAAIDAVEEGLVAGLLERGHALPRTADPAVQIAGNYAPVGERPPVRGLPVSGRLPAC LDGVYVRNGANPLHAPRAGHHLFDGDGMLHAVRLAGGRAESYACRFTETARLRQEREM GRPVFPKAIGELHGHSGVARLLLFGSRALCGVLDASRGIGVANAGLVYHDGRLLAMSE DDLPYHVRVTHDGDLETVGRYDFHGQLDADGTMIAHPKLDPVTGELFALSYNVVSKPY LKYFYFTADGRKSRDVDIPVGAPTMIHDFAVTENYAVVPDQQIVFKLQEMVRGGSPVV YDREKASRFGVLPKRAADASELRWVEVPGCFCFHLWNAWEDDATGEIVVIGSCMTPPD AVFNEPSQSPEEESFRSVLSEIRLDPRTGVSRRRDVLRDAAEQVNLEAGMVNRQLLGR KTRYAYLAIAEPWPRVSGFAKVDLESGTAEKFIYGEGRYGGEPCFVPRAGAAAEDDGH VLCFVHDEERGTSELVVVDAGSEAMEEVAAVKLPGRVPYGLHGTFIGANELQRQA</aaseq>

Gene Sequence

<dnaseqindica>3..1868#cccacctcacctcacctcctcctccacctcctcgaaattattcgaatccatctccttctccctcctcccaacccgcgccaaatcgatcgatcgcgagcgatcttggccgcgtctcaccaatggcgtcctccgcgccttccgcccccggcctcgcgccggtcgccaagccgccgccgccgccgtccaaggtgaaggtggcgacagcaaccgtgccaaccaatggcaagatcaagcagggtgcgaggccaatgcgtgtctcggcgccgccggtggagccgcggcggcggatgaacccgctccagcggctggcggcggcggcgattgacgccgtggaggaaggcctcgtcgccgggttgctcgagcgggggcacgcgctgccgcgcaccgctgatccggccgtgcagatcgccgggaactacgcgcccgtcggggagcgcccgccggtgagggggctgccggtgtccggccgcctcccggcgtgcctcgacggggtgtacgtccgcaacggcgccaacccgctccacgcgccgcgcgccgggcaccacctgttcgacggcgacgggatgctgcacgccgtgcggctcgccggggggcgcgccgagtcgtacgcgtgccggttcacggagacggcgcggctgcggcaggagcgggagatgggacgccccgtgttccccaaggccatcggcgagctccacggccactccggcgtcgcgcggcttctgctgttcggctcgcgcgcgctctgcggcgtgctcgacgcgtcccggggcatcggcgtcgccaacgccggcctcgtctaccacgacggccgcctcctcgccatgtccgaggacgacctcccctaccacgtccgtgtcacccacgacggcgacctcgagaccgtcgggaggtacgacttccatgggcagctcgacgccgacggcaccatgatcgcgcaccccaagctcgacccggtcaccggcgagctcttcgcgctcagctacaatgtcgtgtccaagccgtacctcaagtacttctacttcaccgccgacggccgcaagtcccgagacgtcgacatccccgtcggcgcgccgacgatgatccacgacttcgccgtcaccgagaactatgccgtcgtccccgaccagcagatcgtgttcaagctccaggagatggtgcgcggcggctcgccggtggtatacgacagggagaaggcgtcgcggttcggcgtgctcccgaagcgcgccgccgacgcgtcggagctccggtgggtggaggtccccggctgcttctgcttccacctctggaacgcgtgggaggacgacgccaccggcgagatcgtggtcatcggctcctgcatgacgccgccggacgccgtgttcaacgagccgtcgcagtcgccggaggaggagagcttccgcagcgtgctctccgagatccgcctcgacccgcgcaccggcgtgtcgcggcggcgcgacgtgctgcgcgacgccgccgagcaggtgaacctcgaggccggcatggtgaaccggcagctgctcggccggaagacgcggtacgcctacctcgccatcgccgagccatggccgagggtgtcgggcttcgccaaggtggacctcgagagcggcacggcggagaagttcatctacggcgaggggaggtacggcggcgagccatgcttcgttccgcgcgccggcgccgcggcggaggacgacggccacgtgctgtgcttcgtccacgacgaggagcgcggcacgtcggagctggtggtggtggacgccggcagcgaggcgatggaggaggtcgcggccgtgaagctgccggggcgcgtgccgtacggattgcacggcaccttcattggcgccaacgagctgcagcgacaagcttagctcaaattaattagccagtgaaaaatcaaattacagagttgcttaatttttttactagtagaacgcaacagtaaaaagaattaacagcagtgaattattagttaattagctagggagttgaaatagtttagcggtcatgcactactgatttttaattagtgcagacaacgaccgcgtgtgtgtatatgcatgtataccttttactgtatcttcagattgtgtatatatatcatatatgtacaggaaaagatttatatatcatacatattttgttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0154100, RefSeq:Os07g0154100