Os07g0158200

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Revision as of 08:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0158200| Description = TatD-related deoxyribonuclease family protein| Version = NM_001065461.1 GI:115470654 GeneID:4342437| Length = 3666 b...")
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Gene Name

Os07g0158200

Description

TatD-related deoxyribonuclease family protein

Version

NM_001065461.1 GI:115470654 GeneID:4342437

Length

3666 bp

Definition

Oryza sativa Japonica Group Os07g0158200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3150971..3154636

Sequence Coding Region

3151059..3151085,3151221..3151242,3151361..3151461,3151585..3151642,3151752..3151795
,3151899..3151979,3152682..3152752,3152827..3152937,3153149..3153231
,3153489..3153705,3154169..3154252,3154423..3154498

Expression

GEO Profiles:Os07g0158200

Genome Context

<gbrowseImage1> name=NC_008400:3150971..3154636 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:3150971..3154636 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtccaccggcgtcaagctcatcgacatcgccgtcaacttcaccgatggcatgttcaggggcatctaccacggcaagcaatgccacgccgccgacatccccgccgtgctcgcccgcgcgtgggcggccggcgtcgaccgcatcatcgtcaccggaggctcgctgaaggagtctagggaagcgctcgagatcgccgagaccgacgggaggctgttctgcacggtgggcgtgcacccgacgagatgcggggagtttgaggagagtggagacccggaagggcatttccaggcgctgctggctctggcgaaggaaggaattgcgaaaggcaaggttgtagcagtgggagaatgtggtctggattatgatcgacttcacttttgtccatcggatgtacagaagaagtacttcaagaagcaatttgaattggctgaagcagtaaaattgccaatgtttcttcacatgcgggctgctggtgaagacttctgtgagattgtgtcagaaaatctgtatagattccctgggggtgttacacactccttcactggaactgcagaggaccgtgataagcttctttcctttgaaaagatgtttataggtattaatggatgctctctgaagactagtgaaaatcttgaggttctacaaggtattcctgcagagaggatgatgatagagacagactctccatactgtgatattaaaaatactcatgctggaatcaagttcgtgaagtctgtctggccatccaagaagaaagaaaagtacgagccggattctacagtaaaaggtcgcaatgagccctgcttagtcaggcaagttcttgaggttgtagctggatgcaaaggaattgctgacattgaaggcttaagtaaaactctgtaccacaacacgtgcaggctcttcttccctcaggacctggatgcttctgctgatgcacagcttgagagtggtgcgtttattcaaaatagctga</cdnaseq>

Protein Sequence

<aaseq>MASTGVKLIDIAVNFTDGMFRGIYHGKQCHAADIPAVLARAWAA GVDRIIVTGGSLKESREALEIAETDGRLFCTVGVHPTRCGEFEESGDPEGHFQALLAL AKEGIAKGKVVAVGECGLDYDRLHFCPSDVQKKYFKKQFELAEAVKLPMFLHMRAAGE DFCEIVSENLYRFPGGVTHSFTGTAEDRDKLLSFEKMFIGINGCSLKTSENLEVLQGI PAERMMIETDSPYCDIKNTHAGIKFVKSVWPSKKKEKYEPDSTVKGRNEPCLVRQVLE VVAGCKGIADIEGLSKTLYHNTCRLFFPQDLDASADAQLESGAFIQNS</aaseq>

Gene Sequence

<dnaseqindica>89..115#251..272#391..491#615..672#782..825#929..1009#1712..1782#1857..1967#2179..2261#2519..2735#3199..3282#3453..3528#gttggagccttggaggcccaaacacgaagaccggcctcggcccaattcggactctctccccatctcgacggcggcggcggcggcggcgatggcgtccaccggcgtcaagctcatcggcgagtgctctactctctctcctccctctcctccctctcgctcgcgactctcatgcttctacctggactgacccggccttcttctactcctcctctcatcttcttctccgtctccggcgccaccgcgacgagcagacatcgccgtcaacttcaccggtacccacctcctcctctcctcacgattcttatctcgtttttctcggctcactgtctggctctcacgcttttctacttgcgtcttgctctttgctgctgcgatgcgaacgaactgaagatggcatgttcaggggcatctaccacggcaagcaatgccacgccgccgacatccccgccgtgctcgcccgcgcgtgggcggccggcgtcgaccgcatcatcgtacgctgctttgctgccggccattccccctttcgccttctttcttgcttggtttctactttcttatggctcggctttggtgtgcttaatctcttgctttctttggtttggtccgggcggaaggtcaccggaggctcgctgaaggagtctagggaagcgctcgagatcgccgagaccgacggtgagctcagctgcttggatgcgggttgttttgactatgttctccttggtgccttcaaggtgtttgttgtaatgtgcctgagaagctgtgatgtgcttgtacgatgcagggaggctgttctgcacggtgggcgtgcacccgacgagatgcggggtaggggtggattgtgttccattcctctttcattgctggtacctgagattggcgggtgccttttgcgattgggtcatgtaattagtgctttgctgaatgttaggagtttgaggagagtggagacccggaagggcatttccaggcgctgctggctctggcgaaggaaggaattgcgaaaggcaaggtgtgtgtatcacttgtcctgcaggtctatcatgtagtgaaatgtttcttttaagttcacctggggatcccctcctaaatatataatatatttggcatttctttttcaaagaccatgcaaatagtaagagaacatatagggtggcagaaagtacctgtttccatataggaattacatgtcaaccatcgggtttttttcaggaattagatatcttaaatgcattgtcgtagcagtcttgttcttgagggaggtaagctattgaagatcacccattacagtgtttccagattctccagaagaatagtaagaagaaagtgctgaaatgctgctgtggtagtgcttgatctgcttgtagacttcccaagccgtgtcctgtagtgaaatgttattgcaatcttgccatatattttgcttgaaaataattggactcactgaattatgtctgtagttcttactattaacagaagaccaaaatcattgagcagcagagttctatcttctttgcagtatgcattttctaatggtgttgtaaagtgcaaacaaactcactatgtaacaatatctagttataaatataccctgagttggattccctgaacatataatcttttgcataagtagttcagttatttacttactcttttgttctgtctttcggagtcaaaacttgcaatattctgatatggctttcaattcctacaggttgtagcagtgggagaatgtggtctggattatgatcgacttcacttttgtccatcggatgtacagaagaagtatactctcacataaacacatcgaataatgatagttattcacatatttttctgagcaattttatactgtttaggtacttcaagaagcaatttgaattggctgaagcagtaaaattgccaatgtttcttcacatgcgggctgctggtgaagacttctgtgagattgtgtcagaaaatctgtataggtaatactcaatctgtataccaatactatataggcaaggagccaaggactactgaggagtactgctttgtactcctccagtgttctagatcagcacaattaaagaagctgacaataagatttagttacgtttctttatgtctcactttctgaaaatcactttgacgtatttgcatattttcaagtctgagaaccatatttctccatcgcagattccctgggggtgttacacactccttcactggaactgcagaggaccgtgataagcttctttcctttgaaaagatgtttataggtcatctccttcccaccccttgatgttacaaatttgcatgtgctgcaccttgataattatagaactcagagtaccacaacacttccatttgtagtcaaaattcatttcagtttctgccgcaagttcgttcttttttggtgaagacctccatttgggcaattagatgtgaatacaaatattagtagcaattaaaacgtctcattccattataattcagttatgtcaggtaaaccatactgacttaatgtacaatgcaggtattaatggatgctctctgaagactagtgaaaatcttgaggttctacaaggtattcctgcagagaggatgatgatagagacagactctccatactgtgatattaaaaatactcatgctggaatcaagttcgtgaagtctgtctggccatccaagaagaaagaaaagtacgagccggattctacagtaaaaggtcgcaatgagccctgcttagtcaggtaattcaacacaattatgcataaactctaataaggttattgttcagtaagtatttgactggcctgcaatgcatgaacacctgaagttattatttgcttttcatgctccttttacttggttcttctgaggaaacacagtagaagtaatgctcatcattctgagaacattaaactattttgttattaccacatgcttgttgaaatgtcttacttgactaacaaaatactgaccattggcagttcaatatgatgttttgcagatatttatttggttagcattttccatagatgcagaatcatttgcccagattttaaatcaatttaaattcttatcataatcaatcatgaatctttcgatggaacggaaattgatttcatcaaccttttcttttgtttatactttacacttgcgcctaactttttcctccaagaaaattaataactgaagatacatcaatcccaggcaagttcttgaggttgtagctggatgcaaaggaattgctgacattgaaggcttaagtaaaactctgtaccacaacacgtgcaggtaagctgtccgtgcgtcatgccttgctgtctggtctaagtactcatctaatgcagtcaatttctctaaattttactagtaattttgtccttgatgctacagctctgcatgtctccaattttcatcagatcatgttattgagctcaatctttcatttctctaccttgcaggctcttcttccctcaggacctggatgcttctgctgatgcacagcttgagagtggtgcgtttattcaaaatagctgatgggacatgacagagcgtttgttactttgatattcacttaacgatgtttgctacctttttttttttttttgcttggttaaagatcttgtacttcgacaattgccaaattggcttgctatgagagtgtcgttcatgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0158200, RefSeq:Os07g0158200