Os07g0159500

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Revision as of 08:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0159500| Description = Conserved hypothetical protein| Version = NM_001065467.1 GI:115470666 GeneID:4342444| Length = 3904 bp| Definition ...")
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Gene Name

Os07g0159500

Description

Conserved hypothetical protein

Version

NM_001065467.1 GI:115470666 GeneID:4342444

Length

3904 bp

Definition

Oryza sativa Japonica Group Os07g0159500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3215494..3219397

Sequence Coding Region

3215751..3216392,3216786..3217112,3217197..3217340

Expression

GEO Profiles:Os07g0159500

Genome Context

<gbrowseImage1> name=NC_008400:3215494..3219397 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:3215494..3219397 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaatgttcttcagcagctttcttaatgaatcggcatcatcagagaacctctttggtcatccaaatgtcgagagatgcccattcctgagaaacatcaatggagctacaacatattcattttcttctgctttgccagtagctgcccgaggaggaaatggtccaatttttgaggacggaccaggctttgattcagcatttaaacttttccatggatgggatggaatagttccgctttcaggaaagtcatatttacctgatgagagcaacagtgagagcattgatgccaatcctgaacctgctctgctgtttaacccattggctgctagagctgccacaataagtctatctgcatttgggccatttggttttaacttctttaatggcaaggggaaaaggcagaacaagaagcccaacaatctaaatcagtcaaacaagaagcccagcaatccgaaccagaattccatgaaacagaaaggaggtaactcatcatcgcacgaggcaatgagcaacgaatggatggaaaatgggcagtgcccacttgcccggtcttaccgagcaatgagtggcattctgccccttgttgcaaaggctttacaaccaccagcaggtgtgaagctgaagtgcccgcctgctgtggtcgctatacgtgcagcccttgcacggactgaacttgtgaagtctctccgtccccagcccctgcctgcaaagatggtagccattgcgttgcttggaatggcagcaaacatccctctcggggtgtggcgtgagcacaccaagaaattctccccgcagtggtttgcagctgtccatgccgctgttccattcatcggaatgctgaggaaatctgtgaacatgcccaagactgccatggcattcaccatagcagcctccattattggccagacaatcgggtcgagggccgagcgcattcgtctgaaggcattggctgcaaagggcgacgccgattccaccaccgtggctgacatgtatccaaacaagtctggcaattgcagtgacactgagggcaaggcatgggatccgctcgcgatgaagatggctggacgggcttctggtggcgttgctgcaccaacaccaagcatgtgtttctga</cdnaseq>

Protein Sequence

<aaseq>MEMFFSSFLNESASSENLFGHPNVERCPFLRNINGATTYSFSSA LPVAARGGNGPIFEDGPGFDSAFKLFHGWDGIVPLSGKSYLPDESNSESIDANPEPAL LFNPLAARAATISLSAFGPFGFNFFNGKGKRQNKKPNNLNQSNKKPSNPNQNSMKQKG GNSSSHEAMSNEWMENGQCPLARSYRAMSGILPLVAKALQPPAGVKLKCPPAVVAIRA ALARTELVKSLRPQPLPAKMVAIALLGMAANIPLGVWREHTKKFSPQWFAAVHAAVPF IGMLRKSVNMPKTAMAFTIAASIIGQTIGSRAERIRLKALAAKGDADSTTVADMYPNK SGNCSDTEGKAWDPLAMKMAGRASGGVAAPTPSMCF</aaseq>

Gene Sequence

<dnaseqindica>3006..3647#2286..2612#2058..2201#gcgagaccagacgaagccatccgatccccacccttcctcccctcccacctcatcagcgctggcggcggcggcggcggcggcggcgtcccctggatccctcggcggaggcagcggcagcggcggcggcggcggtagatcaatcgcatttgtctcgctaaatccggcccgcgccgcccgtcgcgtcgcggtaggtgggtagggggaggtgtgtcgcgtcgcgtcgcgtggtagctgcgctcccttcccgcatccgcggtgcctgtgcgtgccctccacacgatccccccctcccgtcgtgttcgtccgaccgtccggcagatcggcgaggtgagctctctctcttcgtcgtttccatctcctcccccatcgttgaatgaattaatccgcctctcttaaggcttttagggtttcgttagcttccactatcgatcatccaccccgccccgctcgatcgcgcggcggcatggggtttaatttgctcttggttcctctacttttggtttggtgcgagtggtgtggtgtgggtgtggtgggtttaggtggatctggcggtgatcgctgtggacgggatctttagcctcctcgtcgagacggattgaccccaattctgtctgatacaatcgactggacttggtgtccaatttgtgtgttagtcattggtttcggtctgcttcccctcccagttactccacccaattcttcagaattgggtggtggcctggtgtgcaaaaagtgcatcagacaaaatttgtatggcacacgccccattcaattagtttttgtgcgtttgctctagttgtgaaaatggaatgctgccccactttgtggggaatgaaagatgattgctgtattggcgcttgcaaaccaatcctagtgctttgtagttgtgcgtttgctctagttgcgccgttaaggcctgggtgaaaatggaatgccgccccactttgtggggattgaacgaaggttgctgtattggcgcgagcaaactgatcctagttctttctagttgttgaggtccatgagtcctcatgaaccaagtcgtcaggtccgtgaggaatctgtgaggtgaaagataaccgagacgactttggtcaatgtcttatcatgtaatcttgtctaactagtactcgtaactacaatgatgccatgggccaataacagctactagaacacacaagacaacagaatctatccacaataggaatatacggcgcgaccaactcctgagttagcacaaatcattcctaaaagtgcacatcatgtttcagccctttatggtaacatcttgaccttcactgagcccgaccaactctgagttagcacaaatcgttcctaaaagtgcacatcatgtttcagccatttatggcaaaatcttgaccttcaatgagccatttctctaagacccgtcttcttggctctgcaaccaagtggcggccttgaccatacaagaagttgggtgtcgcttggtgcgccgttggccaccaacgtagatatacaatgtcatgcatgtattagcaggggcaatgctgcaatggcagcatctcgttttttcccaggatgtacttatatagcttgactttgtaagaggttttattccttctgatgcataatatggttatgcactgtttctctgcccttttagaaaatatagtttgttaaaaggtatgtgtgctgttttgagtagaacaaaaatgattgatctggcatggcactaagtgtgttctgttatatttctctctttgtaaagcaaacactcctgaaagtactatactctattggccttgtaattcatttagggtactgtagaatcacagaactaactaaattaatggcctctatgtctcaatgcattgcttgaacttactaggcttgtcttttgctctcacatgcgcatacatgctgtttgttcgaaggtgatctgagtatgttcaattatcatgacgatattatttatttcctcatgctcaagtctgttgctttcacaatcctcatttatgctttattgaactacatttaccataatatgatttatgttcatttggcatggtttctccaggatggaaatgttcttcagcagctttcttaatgaatcggcatcatcagagaacctctttggtcatccaaatgtcgagagatgcccattcctgagaaacatcaatggagctacaacatattcattttcttctgctttgccagtagctgtaagatcttctttacatgacctctggtgatgacaatatcaatatcaaaagtgcattggatccttaatctgtgctattgtgcaggcccgaggaggaaatggtccaatttttgaggacggaccaggctttgattcagcatttaaacttttccatggatgggatggaatagttccgctttcaggaaagtcatatttacctgatgagagcaacagtgagagcattgatgccaatcctgaacctgctctgctgtttaacccattggctgctagagctgccacaataagtctatctgcatttgggccatttggttttaacttctttaatggcaaggggaaaaggcagaacaagaagcccaacaatctaaatcagtcaaacaagaagcccagcaatccgaaccagaattccatgaaagtttgtcctcattccttccttttattttgtttcttttttcttatggggctatgtttgtgaaatcctatctggtttctcgcaatcaagtcctaataacaatgcaagcctcaattatctatcttaattttgtctattattcaaagtaagaatgttccctactaacttttttaccattttgttataacgaactgatccagaatttgttcagttgaagttaatgattgtgactttggttcacaagtaggcattttggcatttccttggatgtttggctatatgttacttttcatgtatccaagtgctaatgttcttgatcggacagccatagttgcatagctaggattttcatcaatccgatcagttttctcatgttacgttttgaaccattttcagcagaaaggaggtaactcatcatcgcacgaggcaatgagcaacgaatggatggaaaatgggcagtgcccacttgcccggtcttaccgagcaatgagtggcattctgccccttgttgcaaaggctttacaaccaccagcaggtgtgaagctgaagtgcccgcctgctgtggtcgctatacgtgcagcccttgcacggactgaacttgtgaagtctctccgtccccagcccctgcctgcaaagatggtagccattgcgttgcttggaatggcagcaaacatccctctcggggtgtggcgtgagcacaccaagaaattctccccgcagtggtttgcagctgtccatgccgctgttccattcatcggaatgctgaggaaatctgtgaacatgcccaagactgccatggcattcaccatagcagcctccattattggccagacaatcgggtcgagggccgagcgcattcgtctgaaggcattggctgcaaagggcgacgccgattccaccaccgtggctgacatgtatccaaacaagtctggcaattgcagtgacactgagggcaaggcatgggatccgctcgcgatgaagatggctggacgggcttctggtggcgttgctgcaccaacaccaagcatgtgtttctgattgttcattgcttttgaaaatttgtgtctataccagtatctctgtatgtttgagagttgatattgagtctatttttatcttgtgatgtaattgcctttccttgcccctcagaagtatccgtttgtttgtggggtgaggcaagtggaataagagtgctgcagttctgcagttaagcttgccagttctgcagttcatgcatctgtaatttgatgctgcaggatttctgctattttaccaatcatcattgtactgtgtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0159500, RefSeq:Os07g0159500