Os07g0159800

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Revision as of 08:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0159800| Description = E1 protein and Def2/Der2 allergen family protein| Version = NM_001065469.1 GI:115470670 GeneID:4342446| Length = 289...")
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Gene Name

Os07g0159800

Description

E1 protein and Def2/Der2 allergen family protein

Version

NM_001065469.1 GI:115470670 GeneID:4342446

Length

2893 bp

Definition

Oryza sativa Japonica Group Os07g0159800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3230995..3233887

Sequence Coding Region

3231025..3231115,3231241..3231342,3233308..3233465,3233608..3233715

Expression

GEO Profiles:Os07g0159800

Genome Context

<gbrowseImage1> name=NC_008400:3230995..3233887 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:3230995..3233887 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaccaagcagagcctcctcctcctcctcgccctcctcgccgccgccgcggccgtcgcctccgccgtcaccgacgtcgagtactgcaataagggcaagaagtacccggtgaaggtgagcggcgtggagatcgtgcccgatccggtcgcccgcggcgagcccgcaaccttcaagatctccgcttccactgataaaactatcggtaaagggaagctggttattgatgtgaaatacttcttcttctatgtccactcggaaactcgtgagctctgtgatgtgacttcctgcccggcaagtggtgacttcttggtagctcatcagcaaaccctgccatcatacactccaccaggctcttacaccatcaccatgaagatgctgggtgataacgatgaggagctgagctgcatctcgttcgggttcagcatcggtttcgctgcatcagaagccaccatctga</cdnaseq>

Protein Sequence

<aaseq>MATKQSLLLLLALLAAAAAVASAVTDVEYCNKGKKYPVKVSGVE IVPDPVARGEPATFKISASTDKTIGKGKLVIDVKYFFFYVHSETRELCDVTSCPASGD FLVAHQQTLPSYTPPGSYTITMKMLGDNDEELSCISFGFSIGFAASEATI</aaseq>

Gene Sequence

<dnaseqindica>31..121#247..348#2314..2471#2614..2721#acaatccagtcctcgaactcgaacccagccatggcgaccaagcagagcctcctcctcctcctcgccctcctcgccgccgccgcggccgtcgcctccgccgtcaccgacgtcgagtactgcagtgagtgtccctcccgctcgcccccccaaaaccccctttcttccgcggttctgagggggcgaaggttacgcgaagattggatgatttggggttcttgatgatgttgctgttgcttttgcgtgcagataagggcaagaagtacccggtgaaggtgagcggcgtggagatcgtgcccgatccggtcgcccgcggcgagcccgcaaccttcaagatctccgcttccactggtataataaaccaacctctcccgtttcccccttttgcaaatattactcttcgtgatgcagttggggtacttgttccgccatgaattttagtgtactagcaccggctctgaagtcaattggcagtataattgcgagaattaagctctgtactagtggaattttaaggtggtggtagaatttcgcttgctgtttggcctggagaaggaaaaaaagatgaataataattttgcttgctgctgaatgctgaccagaattttcttgtgattgtacggtgaggttaggattggcatacgcagatacactattatctgtggcgattgatggcttgtgttttgcagttttgtttggggatgagtctacactgtgtagctatatgcctatggtgtattaacagcaagtgacagtgcgtgccatggagagtctccttttagaggtgttagggtgtgtacaattagagtttaatttagtggttgagagaaattgcagttatgtttagtaaattctttagacatcggtggcgctgttcgcaagtgcgctccttattatgctcgccctgtagtatttatgtttggcggtaatggccatgtagaacgctgcagagccctagttgatttgtgatttgctgatcacaacctagagatttaggcgtaacatggcattgatttcttgtaagcctttatcagaaatatcactttccctatgtaacggcttaggaatttagggccagtcaagtactcagccataatgaaaacattttttgaagattgtcataccaccttttatgttatgaatggccttctctaggttaggtagcatatattttagaggcaggactgctggctcatttcccctgcttgcctatgagaagcggtctgggtcgctggcgttgccagaaaaacaggagtatggttctgaagatgatgcaatcatgtgtatagtgtgcatcctgttagtaggacaaatcatgcctttgacattttctgcttatcagttcatgtaggcgagtaaataagggaactttagttcctgtcttttttttttgaattaatgttttggttcttaactttctgtataatgcgcatttaacatatctgcacaataaatctataattgtgtacatttaaggaagttgactaataagaatctttatcggcttaattacacctgagaagcagcatccatttgcctattattatgtaaaaggaagctaaaactgaatagcaagcagtgctttttctaatattcaaaatctgtgggcttgatcagtaaatccaccagattgagtcatctccatgttgcctgcagcctaccctattttttacagggcatagcaaattatgtatggacatgattaaattcagtgtatgcacgttgtggtgacaatgatcatttagtaatttgtcctttgggacaccaaagcagagtccatcttattgcatcattagtttccgcatcagtatactgtcatggtaggaataggcacctctgtaagtgaaccatccaaaactttttgttagaaaaaagggtgaagcatccaaagcattggaaatggcactgtgcctcagactcagtcatgcccactgtacccaattttttttttagtttttcctttttcttgaaacgtagtgcttaaaaccttgcaagttatagccttataggtaggtgatagatgtatgtgaggccattttgcatgtggtgtagcatcacagttggcaaaacccgtgacctttttctttcaaccaaatctaaaaaaacaaccttagtgatttgttttaccatatgagtgagtcgaatgtagctatgagtacatttcattataaaccctgatggtttctagatccaatccttagtatatatattatgcttgtcaggactcaggaatctagtttaggatcacaagaattgtttatttctttctgccatactgacaattaatttataatgaatctcgatgacctgctgcagataaaactatcggtaaagggaagctggttattgatgtgaaatacttcttcttctatgtccactcggaaactcgtgagctctgtgatgtgacttcctgcccggcaagtggtgacttcttggtagctcatcagcaaaccctgccatcatacactccaccagtaagtccgaaatttcgcttctaagtctgaaatgtatgctcttacacgataaattcagctcaaataccactgctaataccaaattgtgttttgtgatcatcttacttcggttcatgcttgatgacacttgcttcttcttcagggctcttacaccatcaccatgaagatgctgggtgataacgatgaggagctgagctgcatctcgttcgggttcagcatcggtttcgctgcatcagaagccaccatctgaatgcatccagaggcagaattcagaaatatcacaccatggatgtaattacaaaagcacctatgtatcttagatcatagaactcaaatacaatgcgcatctgccaacacattgtgttcaactaagacgttttatccagagttgaacatacaataaaaacatcactcactagtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0159800, RefSeq:Os07g0159800