BGIOSGA007650

From RiceWiki
Revision as of 18:47, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA007650

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007650, complete gene.

LocusTag

OJ1077_E05.10

Ensembl Transcript ID

BGIOSGA007650-TA

Ensembl Protein ID

BGIOSGA007650-PA

Length

6931

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4814951..4821881

Sequence Coding Region

4814951..4815022,4816144..4816270,4816397..4816452,4816538..4816594,4816699..4816810
,4816929..4816966,4817094..4817195,4817301..4817357,4817437..4817508
,4817674..4817775,4817892..4818087,4818670..4818776,4819178..4819372
,4819452..4819538,4820280..4820384,4820748..4820845,4820931..4821009
,4821593..4821681,4821767..4821881

Genome Context

<gbrowseImage1> name=IndicaChromosome02:4814951..4821881 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:4814951..4821881 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTTCGGCGACCGCATCACCACCTTCGAGGACTCCGAGAAGGAGAGCGAGTACGGCTACGTCCGCAAGGTCTCTGGACCTGTGGTTGTGGCTGATGGAATGGGAGGTGCTGCCATGTATGAACTCGTCCGTGTTGGGCACGATAATCTTATTGGAGAAATTATTCGTCTTGAGGGGGATTCAGCTACAATTCAAGTTTATGAGGAAACTGCTGGACTGATGGTTAACGACCCTGTTTTGAGAACACGAAAGCCCCTGTCGGTTGAGTTGGGACCTGGTATTCTTGGGAACATTTTTGATGGGATCCAGCGCCCTCTGAAAACTATTGCTATTAAATCTGGAGATGTGTACATTCCGCGTGGTGTCTCAGTTCCTGCCCTTGACAAAGATGCTTTGTGGCATTTTAAGCCAGAAAAACTAGGTGTTGGAGATATTATCACGGGTGGAGATCTATATGCTATTGTCAATGAAAATACTTTGATGCAACACAAGGTTGCTCTTCCACCTGGCGCTATGGGGAAAATAAGTTACATCGCCCCAGCTGGTCAATATAGCCTGCAGGATACAGTGCTAGAATTGGAATTTCAGGGTATCAAAAAGGAATTTACCATGCTCCAGACATGGCCTGTGCGTTCACCAAGGCCTGTTATGGAAAAACTTGCTGCAGATACACCTCTTCTTACAGGACAGCGTGTACTTGATGCATTGTTCCCCTCAGTTCTTGGAGGAACATGTGCCATTCCTGGAGCTTTTGGTTGTGGAAAGACTGTCATTAGTCAGGCACTTTCCAAGTATTCCAACTCCCAAGCTGTGGTTTATGTCGGATGTGGCGAAAGAGGAAATGAGATGGCTGAGGTTCTCATGGACTTTCCCCAATTGACAATGACGACAGAGGATGGACGTGAAGAGTCTGTGATGAAGAGAACAACACTGGTGGCTAACACATCCAACATGCCTGTCGCTGCTCGTGAAGCTTCCATTTATACAGGAATTACGATAGCTGAGTATTACCGTGACATGGGTTACAATGTCAGCATGATGGCTGATTCCACCTCACGATGGGCTGAGGCATTGCGTGAAATTTCTGGGCGTTTGGCTGAAATGCCTGCAGATAGTGGTTACCCTGCTTATTTGGCTGCAAGACTGGCATCTTTCTATGAACGTGCTGGTAAAGTAAGGTGTCTTGGAAGTCCAAAACGGGACGGAAGTGTTACAATTGTAGGGGCTGTCTCTCCACCTGGTGGTGATTTTTCAGATCCTGTTACCTCTGCAACCCTTAGTATTGTTCAGGTCTTCTGGGGATTAGATAAAAAGCTTGCCCAGAGGAAGCATTTCCCATCAGTGAATTGGCTCATATCTTATTCGAAATATTCTAAGGCGCTTGAGCCGCACTATGAGAGGGAAGATCCAGATTTCATTGATATTAGAACAAAGGCACGTGAGGTGTTGCAGAGGGAAGATGATTTAAATGAAATAGTGCAGCTTGTTGGTAAAGACGCACTGGCAGAATCTGACAAGATTACACTGGAGACAGCAAAACTTCTGAGAGAAGATTATTTGGCACAAAATGCATTCACCCCATATGATAAGTATTGCCCATTCTACAAATCTGTTTGGATGATGCGCAACATTATTCATTTCAACACATTGGCAACCCAGGCGGTGGAGCGGGCAGCTGGTGCTGATGGACAGAAGATTACATACAGTGTCATAAAGCATCGCATGGGCGATCTATTCTACCGCCTAGTGTCGCAAAAATTCGAGGATCCCGCAGAGGGCAAAGAAGTTTTGATTGCGAAATTTCAGAAGCTGTACGATGACCTTACCGCCGGGTTCCGCAATCTAGAAGACGAAGCACGGTGA</cdnaseq>

Protein Sequence

<aaseq>MAFGDRITTFEDSEKESEYGYVRKVSGPVVVADGMGGAAMYELVRVGHDNLIGEIIRLEGDSATIQVYEETAGLMVNDPVLRTRKPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIPRGVSVPALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALPPGAMGKISYIAPAGQYSLQDTVLELEFQGIKKEFTMLQTWPVRSPRPVMEKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSQAVVYVGCGERGNEMAEVLMDFPQLTMTTEDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYYRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSKALEPHYEREDPDFIDIRTKAREVLQREDDLNEIVQLVGKDALAESDKITLETAKLLREDYLAQNAFTPYDKYCPFYKSVWMMRNIIHFNTLATQAVERAAGADGQKITYSVIKHRMGDLFYRLVSQKFEDPAEGKEVLIAKFQKLYDDLTAGFRNLEDEAR</aaseq>

Gene Sequence

<dnaseqindica>1..72#1194..1320#1447..1502#1588..1644#1749..1860#1979..2016#2144..2245#2351..2407#2487..2558#2724..2825#2942..3137#3720..3826#4228..4422#4502..4588#5330..5434#5798..5895#5981..6059#6643..6731#6817..6931#ATGGCGTTCGGCGACCGCATCACCACCTTCGAGGACTCCGAGAAGGAGAGCGAGTACGGCTACGTCCGCAAGGTCCGTCACCCCCCCTCCTCCCCCCCTCTCCGCTATACTCCTCTGCTCGCATTGCTTCCAATGTAGATCCCACCGTGCTCGTTCCGCGCGATCCCGACGGGGCGCGGGCTCTGTGGCGGCGGGGGCGTGGTCGGATCGGGGCTGAATTGGCGCCGAGATTTGGTTAGGATGGGATGGGGTGGTGGTGGTGATGGCGCGGATTGCTTTGGGGATCTGTCGCGGGCGGGTGGCTAGATAGGGCCTTCGGATCCAGTCTGGCATTGGTGGCTAGCTCGCTTGGTCGGGTGGGGTTTTGCGGAGAGTCCGTGTTGCTGCGCGGCTCTGCTTGAGATTCGCATGTGGTGTGGTGTTCTGATCGCCAGTCCGTACCACGCCATCATATAATGATATGATCTTTTGTTGCAGGGGTATCGCTAATAGTTTAGGTTTTACTGTGAACTCGTGACTAGAGCGGTGCTCAGATGTGTTTTGACAATTTGACTGATGGATGGCATTGCTATTAGCGTGGTTGGATGTAAAAATAAAGTTGTTCGTTTGTTGTAATTTAAGAACCACTAGAAGATACACTGGCTTCTATTCCTCTCCCGGATTATGGATTGAATGATGAACCTGGACGAATAGTGTGCACTCTCACTCTCTGCTTAATTTCATCGAATTTGCTACTCCCCTTGTTCTAAAATATAACAACCTAGTACAAGATTTGGCATCACCTAGTAGGAGATCTGTCTAGAATCGCAGTACTCGGTGTTATATTTTGGGATGGATGGAGTATCTATTTAGAAACAATACACATCATTCCAAAAATGCCATAGTTCAACTGACCGTGCCACTCAACAATGAATTGCGTCACTCATGTATTTCTAGATAGGTTTATGCTAGATTTAGTGTTTGTTAATGCTAAACTGAGTTTTCTCATACTTATGTGTTGGAATCGTAGATCCTATTATGAACTCAGTGCTATCGTATCTGTCTGGTAGAATATTTAGATGTCATCTTATGCTAAGATCTGCTTCCTAGTTATATGCGCACTAGTAATTGCCCTTTTTCTTTTGTATGATGGCATGTTTAGCTCTTAATTTCATTGTGTTGATGAACATTATTGATCGAATGGGTTGTTTTAGGTCTCTGGACCTGTGGTTGTGGCTGATGGAATGGGAGGTGCTGCCATGTATGAACTCGTCCGTGTTGGGCACGATAATCTTATTGGAGAAATTATTCGTCTTGAGGGGGATTCAGCTACAATTCAAGGTGTGGAACAGCTCTTTAGTTTCTATCTTTAACAGCATACAGACACGAGTTCTGATAGCAATTATATGCCTGTTGAAACCATAGTCAATATCTAACATCAGAAATGTTGTTATTTGTGTATCACAGTTTATGAGGAAACTGCTGGACTGATGGTTAACGACCCTGTTTTGAGAACACGAAAGGTGCTTTTTTGTCATTTATTAAACTGATCTGTCAAGCGTACTTGTTTTTGCTTGTTTTTAACACATAAAGGTTATGCCTGCACAGCCCCTGTCGGTTGAGTTGGGACCTGGTATTCTTGGGAACATTTTTGATGGGATCCAGGTACTTCAAGTTGTGAATGTGGAGTAATTTCATTTATTTTTTAAGCTCCTTGCACTCCTTGTCTGTTAACTCTTGTCATGTCCTTTTTCCTATCGTGTTTGCAGCGCCCTCTGAAAACTATTGCTATTAAATCTGGAGATGTGTACATTCCGCGTGGTGTCTCAGTTCCTGCCCTTGACAAAGATGCTTTGTGGCATTTTAAGCCAGAAAAACTAGGTAAAGTATTTTGTATACTTCAGGGGGGAGGGGGGGGGGTTACCTTTTGTTATCCTTTTTCATTTAGCATGCAGTGCAAGGCACTCTAAAATCATCTCCTATTATCATTATGCTGCAGGTGTTGGAGATATTATCACGGGTGGAGATCTATATGCTGTAAGTTACCATGAATTTTGAGTTTCGTCTTATATGGTTATCATGAACACTATGCATCAAGATAGTAGCTTGAGATCTGTCATCATTAATCATGTGCCTTTGCTAAAGTTTTCTGACTATATGGCAGATTGTCAATGAAAATACTTTGATGCAACACAAGGTTGCTCTTCCACCTGGCGCTATGGGGAAAATAAGTTACATCGCCCCAGCTGGTCAATATAGCCTGCAGGTTAGTGGATGCTATCAGTATCACTTTATCCCATGTCCTATTGATCTGCATGCATTCTAACTTTGCTTAACCTTGTATGGAACCCTGCTTTTGCTATAAATGCAGGATACAGTGCTAGAATTGGAATTTCAGGGTATCAAAAAGGAATTTACCATGCTCCAGGTAAACAAGTTCCATCTTTTATGAAGATAACATGTCTGAGGATTAAAGCATTAGTTTAATCTGTTGTACTGCACTACAGACATGGCCTGTGCGTTCACCAAGGCCTGTTATGGAAAAACTTGCTGCAGATACACCTCTTCTTACAGGACAGGTTTGTACAGAACCTACCATGGTTCTCACTCATAATAATATGTGCTTTTCCTCCCCATTTTTATTAAGGTTTCTGTGTTGAACCACTAAATGCTCAAAGTACTGTTTTCCCCCTCTTTTTTCTACTCAACTAATCTAATTCTTATATACTTTTAAACGATCCCAGCGTGTACTTGATGCATTGTTCCCCTCAGTTCTTGGAGGAACATGTGCCATTCCTGGAGCTTTTGGTTGTGGAAAGACTGTCATTAGTCAGGCACTTTCCAAGGTGATCACTATTTTTCTATTCCTCATTGCCATGTAGTATCTATAGAAACTATACTCTCTTTTTGTTGCCTTGATCACATCTTTGTACTGAGATGAATAGCCTCTCAAACTCTGCAGTATTCCAACTCCCAAGCTGTGGTTTATGTCGGATGTGGCGAAAGAGGAAATGAGATGGCTGAGGTTCTCATGGACTTTCCCCAATTGACAATGACGACAGAGGATGGACGTGAAGAGTCTGTGATGAAGAGAACAACACTGGTGGCTAACACATCCAACATGCCTGTCGCTGCTCGTGAAGCTTCCATTTATACAGGTAATGGTGTATTGCTCCTGATTGATTGCTACATTAAGCCATAATAGTGTCTGATATCCATATAGTGTGCCCCACTTTGTCATATAGTAGTTGTTTTGTTTTTTAGTTGTCATATAGTTGTTTAGTTTTGTATGGATCCCAGCAATATGATGTTACATCAACCTGGACATGCCTACTTATTTGGTACGAGTACTAGTTAACATGTATCCACGTTTAGAATCTTCACACCGCACAACAGTGGCTGAAAGTACAACATTGATGATATATGCATCTTTGTCCCTGGTTTATCTGTGTATAAGAGATGCAGGGCAAAATGAAATGTAGATGCGCATTTATTCCTGAGACCCACACTTGTATATTATTGTGAAATATATTATAAAATCTTGATGATGAAGGCATTTCCCTCCCCAACTATATTTTCAATTGTTGCTATCCAGTTAGATTTTTTGTAACATTGGCTTATCTATATGTTTAATTTCCTGTTGCTTTGGTCATTTGGACTGCTATATGTATTTTATGGACCTTAAGTTCATCACCAATGATCTCATTGTAAACAAAATCTTATATGACTTTGCCCCCCAGGAATTACGATAGCTGAGTATTACCGTGACATGGGTTACAATGTCAGCATGATGGCTGATTCCACCTCACGATGGGCTGAGGCATTGCGTGAAATTTCTGGGCGTTTGGTACGTTGTTTTTCTTCTGCCATACTTGCCCTCATTTCCTTTTTGTATTTCTCATCCTAGTGTACTTTAACTTGCACAAAGCTCTGTCCTATTCTCATGGAAAGACAATCAGCTTCCGATTTCTTAAACGGTGTGCCGACATATTTACACTAGCAGTTATTCTTTCATTGTGTTTTCACTAGTAGTTATGATAGCCTATTTACACTAAAGTAGTTATAGAATCAATTTACATCATTTACTGCAATATTACCATGTATGGCTAAAAATTGCTAACTGCTAATATAGCCTTTGGAAATAGAATACTTAAAAGTTAAGATTGTTATAACTCATTCGTGTTGATTTTTTGAATATCTATTTTATGTTAATATTCTAATGGGCAATGCCACATTTTTGTTATCCAGGCTGAAATGCCTGCAGATAGTGGTTACCCTGCTTATTTGGCTGCAAGACTGGCATCTTTCTATGAACGTGCTGGTAAAGTAAGGTGTCTTGGAAGTCCAAAACGGGACGGAAGTGTTACAATTGTAGGGGCTGTCTCTCCACCTGGTGGTGATTTTTCAGATCCTGTTACCTCTGCAACCCTTAGTATTGTTCAGGTAAGGAAGCAGCTAAGTCTGTCATGATTAATAATGTTTATCGTTTCAGTGTTGTTAAACCACATGTTCTTGTTTGTAGGTCTTCTGGGGATTAGATAAAAAGCTTGCCCAGAGGAAGCATTTCCCATCAGTGAATTGGCTCATATCTTATTCGAAATATTCTAAGGTTTGTTCTGACAAGCAACTTGCTTAAATAGTTTATTCTCCCCTCAGATTCCAACTGTAAGTTGATTTAGACTTGTGCACAAAGATTAAGAAAGTACTAAAATGAATTTGTTGCCATTCATTTATTTTCATGAAAATGCAAGAGAATTGCGTTTCATTTCATTAAGGGGAAGAAAATAAAGTAATTTTTTTTGTTGCCATTCATTTATAGTTTTATACTATTGAAAAAATGGAACATTTATTTGTGAGAGCTGTAGCACTTATTTTATTTGACAAGGGCAAACATGAAAGAGTTCACTATAAGTTGTTTTTACTTTTTTCTAGTCAAACTTAAAAGTTTGTAGAAAAATATAGCAACATTTTCAACACAAAACAAACATAGTATCAAAATATATTCAATGTTACATTTGATTAAACTAATTTGATGTTGTAACTTGTAAATGTTGCTAATTTTTTCTATAAACTTGGTCAAATGTAAAGAAATTTGACTAGGAAAAATGTCAAAGCGACAAAATATAAAACGGAGAGAATAGGAAGGAGTTGAGTGGCCAGAGGAAGTAGACAACAGGTCTCTAGAATAACAGAACTATACGAGTTTCTATGGTTATAATTTGTTCTAATTGTTTTTGGTCTTCTAACTCATTTTTTTCAATGAAATGCTAATAAGTTTATATTTGAACATTTTCCTGTTCGTTCGCATTTGCTTTGATGTTATGTGACAATACAATGTTTTGTGTTGCAGGCGCTTGAGCCGCACTATGAGAGGGAAGATCCAGATTTCATTGATATTAGAACAAAGGCACGTGAGGTGTTGCAGAGGGAAGATGATTTAAATGAAATAGTGCAGGTACTATTTTGAGCCTTGTGAATATTTACTCTCCTGGAATTCCACGATGGTTTGACCTGTCTTATTGAAGTTACCTTTTCTCATACTGTCGTATCCCTCCTGGCTGTAATGCTTCTTATTAATCTGCATCATGCAAATGTAACATCCTATCAGAAGTGTTCGCACATATTACTTGCCTACCATAAGTGCTTTGTACCAGTTTCTTGGCATTTGTTCACTTAATGGTCCTGCTAATATTTTGAAAATGATAATAAACTTGACCTTAGTACGTACGTTATTTTTAAACAAGCTGTGGCATAAGTAAGATTTGAGCTTTTGTTGTTCTTTGTGTGATATTTATTGTTGACTCTACCCCACATTCAGCTTGTTGGTAAAGACGCACTGGCAGAATCTGACAAGATTACACTGGAGACAGCAAAACTTCTGAGAGAAGATTATTTGGCACAAAATGCATTCACCCCGTGAGTGTTAAACCCATTTGATAGTTCTACTAACCTGTGTCATAATCCATATTAACTAATTGATCAATTCTGTTGCATGAAACAGATATGATAAGTATTGCCCATTCTACAAATCTGTTTGGATGATGCGCAACATTATTCATTTCAACACATTGGCAACCCAGGTAAATTCTCTTGTTCCAGGAATTCGATAATTTGCCAATTTTCTTTAGAAAACCAATCCTAGCTGACTAGAAAATCATGCCAAAACTTTCCAATAATTGTGTTCTATCAGCTGTCACTGATGCTCGTGAGCTTATATTTAAATCAATCTGGGTCACCTAGAGGCCCCAAATCCCAAGATCATAGAGTGGCGTGAAACTGAGACACTGGTTCCTGTTTGATCTAGAATTTCTGATTTCTGGAACAAAAAGATAGTAGTATGAGTTGGATTTATATACGGAGTTCTAGGTTTTGGATTACTGGCATAGATAGGCTCTGGATCGATTTGTCACTTGAATTTAAATAATTGAATCCTAGCATGGGCATCAGCATGGAACTTCAACACTTAAGGTATCATTTACATTGAAAGGTGAATGAGTGGAGCTAATTGAAGACAACTGAACTGATTAGAGGCACTGTTTGTTGTATGTCATATAAGTTACTCATTGTTTACTCATTACTCAATATAATTACAAATAGGATATTCCCATACAAAAGTAGCATAAGTACTATTTTAATAATCTGTATGCTTTTATTGTTTTATAGGCGGTGGAGCGGGCAGCTGGTGCTGATGGACAGAAGATTACATACAGTGTCATAAAGCATCGCATGGGCGATCTATTCTACCGCCTAGTGTACGCATTTCTACCCTATTTTCAAGTTTCTAACACTCGCTGTGTAGATTGCAATATGACCAATGGTATTTGTTGCTTGTCACAGGTCGCAAAAATTCGAGGATCCCGCAGAGGGCAAAGAAGTTTTGATTGCGAAATTTCAGAAGCTGTACGATGACCTTACCGCCGGGTTCCGCAATCTAGAAGACGAAGCACGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007650