Os07g0160600

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Revision as of 08:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0160600| Description = Beta-Ig-H3/fasciclin domain containing protein| Version = NM_001065476.1 GI:115470684 GeneID:4342453| Length = 3782 ...")
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Gene Name

Os07g0160600

Description

Beta-Ig-H3/fasciclin domain containing protein

Version

NM_001065476.1 GI:115470684 GeneID:4342453

Length

3782 bp

Definition

Oryza sativa Japonica Group Os07g0160600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3290477..3294258

Sequence Coding Region

3290546..3291911,3293782..3293855

Expression

GEO Profiles:Os07g0160600

Genome Context

<gbrowseImage1> name=NC_008400:3290477..3294258 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:3290477..3294258 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgtctccgccctgctgctcctcctcctcgccgcggccgccaccgccgcgccgccggagcagcccgcattgtccgctactccctcctccgccgccgccgccaacaacagcagcggtggtggtggtggtgcggcgagcaacggggtgaactcgaactcggtgctggtggcgctgctggactcgcactacacggagctggccgagctggtggagaaggcgctgctgctgcagacgctggaggacgccgtcgggaaggggaacgtcaccatcttcgcgccgcggaacgaggcgctcgagcgcgacctcgacccggagtttcgccgcttcctcctcgagccccgcaacctccgctcgctgcagcggctcctcctcttccacgtcctccccgcccgcctccacgcctccgactcctcctcccccgacttcccctcctcccaccccaccctctccggcgagcgcgtcgacctctccgcctcgccgatgcgggtcggcgccgcggcggtcacgcggcccgacgcggtggtgcgccccgacggcgtcatccacgggatcgagcggctgctggtcccgcgctccgtgcaggaggatttcaaccgccgccgcagcctcgccgcgatctcggcggtgctcccgacgggggcgcccgaggtggatccgaggacgcaccgcctcaagaagcccgcgccgcccgtcccccccggcgcgccgccggtgctgccgatctgggacgcgatggcgccgggcccatccatcgcgccggcccccgcgccggggcccgggtccgggaaacaccacttcgacgggcacagccaggtgaaggacttcatccagacgctcctcctctacggcggctacaacgagctcgccgacatcctcgtcaacctcacctcgctcgccaccgagatgggccgcctcgtctccgaggggtacgtgctcaccgtgctggcgcccaacgacgaggccatggcgcggctcaccaccgaccagctcagcgagccggggtcgccggagaacatcctctactaccacatgatcccggagtaccagacggaggagagcatgtacaacgcggtgcgccgcttcgggaaggtgaggtacgacacgctgcggctgcccaacaaggtgacggcgagggaggccgacgggtcggtcaagttcggccatggcgagggctccgcctacctgttcgacccggacatctacaccgacgggaggatctccgtgcagggcatcgacgccgtgctcttccctcccaaggacaccgccaccggcggcgaaggctcaggctccggctcgtcgggcgccgctcccgccaggaaggcccccgccgtcaccgcccactccaagtccaagctccgacgagggaagttgttggaaggggcatgccaagtgatgggcttcctaggccgaagatcgcgattcgcgagctgccaatag</cdnaseq>

Protein Sequence

<aaseq>MGVSALLLLLLAAAATAAPPEQPALSATPSSAAAANNSSGGGGG AASNGVNSNSVLVALLDSHYTELAELVEKALLLQTLEDAVGKGNVTIFAPRNEALERD LDPEFRRFLLEPRNLRSLQRLLLFHVLPARLHASDSSSPDFPSSHPTLSGERVDLSAS PMRVGAAAVTRPDAVVRPDGVIHGIERLLVPRSVQEDFNRRRSLAAISAVLPTGAPEV DPRTHRLKKPAPPVPPGAPPVLPIWDAMAPGPSIAPAPAPGPGSGKHHFDGHSQVKDF IQTLLLYGGYNELADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMARLTTDQLSEP GSPENILYYHMIPEYQTEESMYNAVRRFGKVRYDTLRLPNKVTAREADGSVKFGHGEG SAYLFDPDIYTDGRISVQGIDAVLFPPKDTATGGEGSGSGSSGAAPARKAPAVTAHSK SKLRRGKLLEGACQVMGFLGRRSRFASCQ</aaseq>

Gene Sequence

<dnaseqindica>70..1435#3306..3379#ctcccacgagacagcacaaacccaatcccatccaccaaccacctcgccgccgtcgccgccgccgcagccatgggcgtctccgccctgctgctcctcctcctcgccgcggccgccaccgccgcgccgccggagcagcccgcattgtccgctactccctcctccgccgccgccgccaacaacagcagcggtggtggtggtggtgcggcgagcaacggggtgaactcgaactcggtgctggtggcgctgctggactcgcactacacggagctggccgagctggtggagaaggcgctgctgctgcagacgctggaggacgccgtcgggaaggggaacgtcaccatcttcgcgccgcggaacgaggcgctcgagcgcgacctcgacccggagtttcgccgcttcctcctcgagccccgcaacctccgctcgctgcagcggctcctcctcttccacgtcctccccgcccgcctccacgcctccgactcctcctcccccgacttcccctcctcccaccccaccctctccggcgagcgcgtcgacctctccgcctcgccgatgcgggtcggcgccgcggcggtcacgcggcccgacgcggtggtgcgccccgacggcgtcatccacgggatcgagcggctgctggtcccgcgctccgtgcaggaggatttcaaccgccgccgcagcctcgccgcgatctcggcggtgctcccgacgggggcgcccgaggtggatccgaggacgcaccgcctcaagaagcccgcgccgcccgtcccccccggcgcgccgccggtgctgccgatctgggacgcgatggcgccgggcccatccatcgcgccggcccccgcgccggggcccgggtccgggaaacaccacttcgacgggcacagccaggtgaaggacttcatccagacgctcctcctctacggcggctacaacgagctcgccgacatcctcgtcaacctcacctcgctcgccaccgagatgggccgcctcgtctccgaggggtacgtgctcaccgtgctggcgcccaacgacgaggccatggcgcggctcaccaccgaccagctcagcgagccggggtcgccggagaacatcctctactaccacatgatcccggagtaccagacggaggagagcatgtacaacgcggtgcgccgcttcgggaaggtgaggtacgacacgctgcggctgcccaacaaggtgacggcgagggaggccgacgggtcggtcaagttcggccatggcgagggctccgcctacctgttcgacccggacatctacaccgacgggaggatctccgtgcagggcatcgacgccgtgctcttccctcccaaggacaccgccaccggcggcgaaggctcaggctccggctcgtcgggcgccgctcccgccaggaaggcccccgccgtcaccgcccactccaagtccaagctccgacgaggtcagtaaaaaaatataattagcaatgctggttaattaatttgttgtgattactgattagtacacttgagagggtaaaaacggaagtgagtgtcggtgcggggtgtttttactgttggaggtagtgggtcgctgtcgcgggcagtttgccgggaatcgaagcaaaagacgcatccagctagccaagcatctcaccaacatttttttttggagttaattagtatagcaaagtactcttattaaataatgataaatattactccacttaatcatggcccggcctccatcttaatcgattcatttagctcagcttagctgtgtcacgttgaagtctttaggacagtcagctagtgtgggacccgcagcacagcgaccataaattggcggcacgttattccgttgggtgggggagcgaggtaaataaatgcaagctaggtgccgtggttaattattgctcccatctattctttatagtaatatttcatcttggcacatgcataattaattgtacttatcatccatttaaacatgctactaatcattcctcgtaaacaagcgattcattaatatttatatttctagatacccatatagccaatcttgagtagagaaatagagagtcacgcattaatttcgagaaagtcattaagatgatagtcatatttttaaatctgaaaattttatttttaatagtcatatttcaatccaacaacttatcatcttaatggctttattggatttaatgcatgactcttcatttttccacacaagattggctacataggcatcgagaaatgtaaatattaatgaatcgcttgtttacgaggaatagtagcatgtttaaatagatgataagtacaatcacttatccttggtctgtgtgccaagataaaatataactatcataaatagatggaggaagtaaaatttttagatttaaaaatatgactaataaaagtaataaaagtagatggagggagggagtactatttaattaacccgtgatttgttggaggaaaccgagtgagtccgtacgcggcgggggagacagcgagggctgagctgtcggttgacaccgacggctcaacccaactgagctggattgccttagatggggcccagctgtcagtgtgacggtccgtgcgttggtggatcgatcattcatgccttcatggtgccctcgtgattcgggaagggggtagttacgccgctgactcgtgggcccgggttggtgtcgctttgttgttcttgctgggccccgctcgtctgtgtctgggagggctgtactccacctgtctgggcctcgcttcctctgtctctctctcgcacagtcgctggaatggatgcagctgaaacaccattgttttatccgatttactactttgcaatatctgaattttgacatagcgattagcctattattaattactactatgcgatcgtggcctgaattttgacatagctatgaattgtgttatgggatgtaaagaaaatgggagacaactgaaaaacaggagtagttgacactgatgtaatgtagagatgcttgctacttgtgccataatattctagaagtattatggaatagccaaatgtgatgtccattgcaagcaaagattacaagcaaagattacaagggtcactgttgatagatatagattattgtcatcagggggtgatgtgacttagtaccaataatttgatggaaccaatttaacaccgacacaacaatataaagacacagtactgattctgcaactaattagtatttactaatatacaattgctgtcatctatctccatggctttacggtttgttattttaaaattcctttcagatctcctaaaaatcattttgcttcatgttgcagggaagttgttggaaggggcatgccaagtgatgggcttcctaggccgaagatcgcgattcgcgagctgccaatagactacgacaatggcttgatggacaaatatgtatatctgccactgctttttgctcaactcatgacgctgaaacatgaaccgaaatgaaggctacagatgatgattggttggatggatgaatggacgaacaaattgatgatggttttacataagcttaattaagaggaagaaataaggtgtcatgagaacgagttgagagagacggatggcagacattctggttggttgttggaggtggaaaaaaaaaaggatggaaatttgtttatactggtcagtgaagatcaaacaccgatgtatagcaattaaacttttctatttttttatttgttttattttattttgttgatgatgatgttcagcgctttttgataatgaggaatgccaaaaacaaaaattgcagtgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0160600, RefSeq:Os07g0160600