Os07g0163000

From RiceWiki
Revision as of 08:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0163000| Description = FAD linked oxidase, C-terminal domain containing protein| Version = NM_001188136.1 GI:297725402 GeneID:9270233| Leng...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0163000

Description

FAD linked oxidase, C-terminal domain containing protein

Version

NM_001188136.1 GI:297725402 GeneID:9270233

Length

7011 bp

Definition

Oryza sativa Japonica Group Os07g0163000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3395160..3402170

Sequence Coding Region

3395644..3395763,3396147..3396190,3396266..3396396,3396612..3396718

Expression

GEO Profiles:Os07g0163000

Genome Context

<gbrowseImage1> name=NC_008400:3395160..3402170 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:3395160..3402170 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccacatatatgtttatttatgcaggatgtttgtgttcctttgtctagacttgcagaatgcatatctgtctcaaaggaaaagcttgatgcatcaccattgacttgtttggttatcgctcatgctggtgatggaaacttccacacaataatcctatttgaccctagtcaagaagaccaacgacgtgaagcggagaggctaaaccatttcatggttcatactgctctctctatggaaggtacctgtacaggagagcatggtgtaggtacagggaaaatgaagtacctagagaaagagctgggcatcgagtcgctaaggacgatgaaaagaataaaggctgcgttggatcccaacaatatcatgaatccagggaaactgattccacctcaagtctgcatttga</cdnaseq>

Protein Sequence

<aaseq>MPHICLFMQDVCVPLSRLAECISVSKEKLDASPLTCLVIAHAGD GNFHTIILFDPSQEDQRREAERLNHFMVHTALSMEGTCTGEHGVGTGKMKYLEKELGI ESLRTMKRIKAALDPNNIMNPGKLIPPQVCI</aaseq>

Gene Sequence

<dnaseqindica>6408..6527#5981..6024#5775..5905#5453..5559#cctcgctctcgcccccacttcctccgccgccatggccaccgccgccgccgcgctcctccgcctctcccgctcccgccgcccgctcctccccctctcctccctccgcctcccgcctcccgccccgtaccaccaccactcccactcccaaaccccaccctcctcctcctcctcccacgcccgcctccccgccttcctctccttcctcgccgccgccgccgccgccggaggaacgaccgtcgccctctgcgactccggcatcgaccaccggtgctcgcccgcccgcccgcccgcccccacaccgatcgctcagtcgatcccgcggttgcgtattgacgcgttgcttttgttctgcagggtcgggggcaaggagagcaccgagctggtggtgcgcggggagcggaagcgcgtgcccaacgagttcatcgacgagctcgcttccttcctcggggtgatgagctcgtggccttttcagtgaggatgctttcgccgttgaggtgagctgagctgagctgactgctaagtgtccgtcctcgcaggagaacctgacggtggactacgaggagaggcactaccatggcacgccgcagaacagcttccacaaggcagtcaatgtgcccgatgtcgtcgtcttcccgaggtataacctgatctaacagtagtactgattactgaatagtgatagatactgattgataccaaagttcgtcttgtggggttatgtgttgaccttgtccttctctcagagattgtaatgccggcccaaatcaaattttgcaggtcccaggatgaggtacagaagattgtgatggcttgtaacaagtacaaggtatgtctcattaatgcaaacacggtgcgaatcttttgcatttttctttagaaagagccgcatcagttatccgtctgctagactttactacatttgattgtgtgaattgtgaaaatccactttctatcacactatgctgagctagatttttatatttcagatttcagactaattttattggttgttttagtttacatgaccttggtactgctgctaatcacgtgtgatgtaacgaatctttctggcttctcgtttttctcgtctgactcttgtactttgttacacgtgccatttaaaatctgtttagaaaattggaaatcaattttcaccttgagaatgccatattctcagtaaaggaattctttaccttcatttgctgtctccagcaatagtctataaaaggagcagacagtgtggatgtctcccaatgttttcatgatggctaattacttgtatgagggttccactatagaactgaatgatgatgcctttttcttcgagacaggtgccaattgtaccatatggtggggctacatcaattgagggtcacacgttggcacctcatggtggtgtttgcattaacatgtctttgatgaaggtaaacattgataaatgtaactagagaccatatagttgtaggcactaataatttcgtggaaattaaatctttctgaattaattacccttgtttctaatccttaaaaggtgcttcagtatatgttccatcaatttctttttaccatggtttgattgtttgatactacttccatatgccaaacagacaaaactgttactagcagtgagctcttgatgcaggatagatgagacgatacaaagctgtttctctgttaatttcactttcttctaatttgtagtttgctttaaatcgttcacagaaaatcaaatccctgcatgttgaggatatggatgtagttgttgaaccaggagttggatggattgagctgaatgagtacctgaaaccatatggcctctttttccctcttgacccaggcaagtccattgtttattgtttacgtgaaacataatctgtccactaactttgacataaaacagtatgaatttgtactggatgtcatttggttgctgctaactaaatttagtttctgataattttgtttaactttcttgcatcgtctagacatttgggtgatatgtacatctttgtgcctgtgataacatgacatgcagcatattcgtccaacttcacccatccttttgggcatttggtaacatgatatgaagcataattttgtgctagatcggtggtttagctcaagtattcttatctgatttgcagggcctggggccactattggaggaatgtgtgctactcgctgttctggttcactagctgtgaggtaattctccttatatttctcagggtactttcgagcttttatagtgaaacggtccaccccatcgaaaaataatgtacaactgtaatccacgtgatggtgcattcttttatggttatctttatgatttactgttaaatggctttgatgatttgcttattagtttgtaggtacggaacaatgcgggacaatgtgattaacctccaggttcttttggctatccttgagtgagctattttcaattgactttcacatacaaatagtaaaattttctcagtactgcaggctgttctacctaatggtgatgttgtcaagacgggttctcgagcccgaaagagtgcagctgggtatgcaagatcccctcccgaataagtttctttttatgtatcttgggagtgaatcattatttcactggttcctatgcccattaatgtgttaaatacatgtgggatttacatgtattcttggcatcaatgatgggttttttgttctcttctgttgaatgtcagatacgatcttgctcgtttgatcattggaagtgaaggaactttaggggtaattacagaagtgactgtacgtcttcaaaagcttccatctcattccgtggtaggtcttctatttcatctagacactgtccaaacaatgttttgcttacagtgtgtactggacttgaatgccgtcaactctctgcatattggtgtgtgcagttgttgtgttagcatatacactattatggctttatgtagtacaccaattactttcatttgctcatagatctttctttttggagaaatcctttataatcatgctatggcacatagctattatcttgcatattgggaaatggggaacatttgtgagtctgaacaaataaaagcttctcttctaagcacctgctgtgtgctctgaactggaaaaataacatggtctgaagcctatcggtgtgatctactccctaaatttctaaacctaatactgttgaaagatctacgcacacacacacacactggatttctatgttcattttgctgtacgaactattttgtactacctgtctattttgttccttattttactggtgaagacactcctaggtgctctgctatttcaggttgcaatgtgcaattttcaaacaattaaggatgctgctgatgttgctattgcaacaatgctttctggtatacaggtttgtctttttttcttctgattttagttagttacaggtttgtcttttttctgctgatgaagctcatatatgaaattgtcacacctccactttgtaatccatcatttcgatcaatgaaatggctataaggtagctctaccttcttacatcaaaaaatatatgagattgttacacctctgtttcagattgagcaaatccgcttgtctccataggcaagtgttaggttaactaactagggaaatttggttctatgaactataaatattgaaatgctttcatagaacttctgcaggtgtttcagtaagcaatttaaaaaggttgtaggttatgactacttgtatgttttctgcttgaccaggtctcaagagtggaattgttggatgaggttcagataagggcaattaacatggcaaatggtaaaaacttacctgaagtaccaaccttgatgttcgaattcatagggacaggtaacctaatttttatttgaatagttaacacttcacactgaactttgacaaaaaagtctactttatactgtattgtgcatctatgtttggcagtactgagtcctctagagttaagtgttcaaataataaataaaagatggaacaggaaccaataggcatagaatatcttagttttctctagatatgttgacactataattgacaaatgcaactccacagttttatacttttaccgtcaattagtgtttatgaatttggttgatgatcaacggtagtgagtaaagaactctcgaataaaactaaatttactgtgcacactgtttctgtcaagataactttttgaatagtacgtattaaatagcagtcggtatgtagtcaagtttggtttcaaagagtgacatacaagtctgggcttgtgatcttcctgtcttagggacaaaaccagcacatttcgagtaatataatacctgggttttgttatccacttttgagcagttccactcgaaactcaaagttccttctcattaaaaaacttcttaagatgcaactatttttttcagcttgaataccacaatctatttttttatttgctaatatatttccatcgtgaatacccagaagcctatgctcttgaacaaacactattggttcaaaagattgccacagaacaccatggatctgattttgtttttgtagaagagctggatgctaaagaggagttatggaaggtcagccaattttttcatctgaacttgtgtagatttcctagtactcatctgaatattgtagacttcctagtaaataaagtagtctttattctgcataatcttacacatgcctgaatatggtatcaaactatcaatttgcatccacctatatctgggtaacagtggcagtggcagtactgaagtatgtgtttctccttttgctgaaacatatttatgatagcattttattcttatatgtgcagattaggaaggaagcactttgggccggttttgccatgaaacctgatcatgaggctatgataacggtctgtttacttataacttgtcaacatatatttttttgaacaaaaaaatatattgatcaagcatagtcggtgtactttgatgttacacatcatgctacctgatgtttgattatgtagttgtgaatctcagcatcttccttcgtagttatcatcctcttcataaatgtgagaacaattatgatctcaaaataagtgctgcattcaggaggacaattggcaaccaaacatgcttacggctatgtaaatatgattggtcttgtatctcaactctttctttgaatcaagataggacttctccattagcaagctggtctatttaaatcttgtgagcaccatatttataggataaatccataatatgctactcactgtgaggatgacatgtggctcccgtatcatgtgcgtctatagattggacaactcaatggcataaaatggatcccccctcccccttctgatttttttttatctcatatgcttatatagatcgtccaaaggtcgtcacaatcatcatacccttacaagctttcaattttcagtggactgactctatcaagtcatctaatgccacatatatgtttatttatgcaggatgtttgtgttcctttgtctagacttgcagaatgcatatctgtctcaaaggaaaagcttgatgcatcaccattgacttggtacacgttctctcttattatgcaaagccactgtgtaaaattatgttctcatttatatctaatacaaggcatagtcatgtgctccattatctaatatttgaagtatgcataaagtagcatcaagcatgttattatctcgcaatggctccaataagacatcatgccatctttttttaatcatgaattccttacctctgatttttgtacgttcctagtttggttatcgctcatgctggtgatggaaacttccacacaataatcctatttgaccctagtcaagaagaccaacgacgtgaagcggagaggctaaaccatttcatggttcatactgctctctctatggaaggtacaatgaaaaactgaccaagccagcatgtaaaagctgcctgaaaagattaatattgactctgatgatgaacaggtacctgtacaggagagcatggtgtaggtacagggaaaatgaaggcaagtgtctatcacctgttttcttttattatgttctgcacttctgctagcagatacaagagccatctttgctgatacgattctcaaagtgatggcacaaccgccaagtgccaatcactaaccattctcttaagataggaaaattgcaagaggctataccagtacattcatgatggttgaacagattaaaagttcatgagtatctggcccagaacgtaccttcaaaacttcaatttcccttgctgcctattgtaaatttgttaccctacgggttatcaagatgtactttatttttgaatttcctgataggacctcctattgtcttgctcatggctgtcatcacccccattactgacttttattttttctatgcattttggcagtacctagagaaagagctgggcatcgagtcgctaaggacgatgaaaagaataaaggctgcgttggatcccaacaatatcatgaatccagggaaactgattccacctcaagtctgcatttgatgatacagacgttcccaagttgctggctgactcactggctggttcagtgacttccactcaactcccagtccagcaaggcaagtcgtggcgttaccactgaatgcgcattgaacggcgaagactcaggactgttatacacgagttgaatgcaaaaataaacgtgaacgctagaactgttactctgagccattcatataccgggaataaatgagcaaaacttcgttccagttgctatatgaaatatgagtgattctatgataggcttggtgatagaaaattctaagctatttcaaatatttggagctaaacaacgtagtagtagatgtttggtgaattgaagatttgccacgttagagctgataatatgatttgtcactcatgtgtctatgatatactagaccagtgagtgttgcgtgagttacttggagtagggtaaaaaatgttatggatttttctgtccggctatcgttttccttttataccc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0163000, RefSeq:Os07g0163000