Os07g0164300

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Revision as of 08:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0164300| Description = Syntaxin/epimorphin family protein| Version = NM_001065494.1 GI:115470720 GeneID:4342474| Length = 3988 bp| Definit...")
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Gene Name

Os07g0164300

Description

Syntaxin/epimorphin family protein

Version

NM_001065494.1 GI:115470720 GeneID:4342474

Length

3988 bp

Definition

Oryza sativa Japonica Group Os07g0164300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3478495..3482482

Sequence Coding Region

3478756..3478923,3479027..3479092,3479200..3479280,3479402..3479479,3479625..3479711
,3480127..3480169,3480266..3480339,3480687..3480775,3480878..3480926
,3481090..3481146,3481256..3481357,3482365..3482481

Expression

GEO Profiles:Os07g0164300

Genome Context

<gbrowseImage1> name=NC_008400:3478495..3482482 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:3478495..3482482 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gccacgccacgcctaactctctccctctctctctcctcgccgccgccgccgcctccacgtttctctctcctcgccgcgcgccggcgagacctcgccgccatgaacaatctcctcaccgattcgtttgagctccctcggggaggctcttcaagagatggggacattgaaatgggaatgcaagctgatccttcagacaatctaaaaggtttcttgaaaaaggttgacgcaattgaaagcctaattgctaagctgacgaatctcttgcataagcttcagactgcaaatgaggaatctaaagcggttacaaaagcaagggacatgaaagcaattaaacagaggatggagaaagatattgatgaagtggggaaaatcgctcgcatggcaaagacaaaagttgatgaattggaaaaagataacttatcaaacagacaaaagcctggatgtgggaaaggatctgcggtagatcgatcaagagaacagactactggagcagtgaaaaagaaattgaaggagcgcatggatgattttcaggttttgagagaagcaatccggcaggagtatcgtgatgtcgttgaaagaagggtgtttacagtaactggtagtcgtcctgatgaagagacagttgacaatttaatagagactggaagaagtgagcaaattttccaagaagctatccaacagcagggaagaggccaaatactggacactgttgcagagatacaggaacgtcacgatgctgtaagagatctagagaggaagcttctggagttgcagcagatattcatggatatggcagttttggttgatgctcaaggagacatgatcaacaacatagagacacatgtttcaaatgctaccaaccacatacaacaaggcgtcagtgctctacagaacgcgaagaagctccagaagaactccaggaagtggatgtgctacgccatcatcctcctgctcatcatagtggtgatcattgtcgtcgccgtcatccagccatggaagaagggtgcttga</cdnaseq>

Protein Sequence

<aaseq>ATPRLTLSLSLSSPPPPPPRFSLLAARRRDLAAMNNLLTDSFEL PRGGSSRDGDIEMGMQADPSDNLKGFLKKVDAIESLIAKLTNLLHKLQTANEESKAVT KARDMKAIKQRMEKDIDEVGKIARMAKTKVDELEKDNLSNRQKPGCGKGSAVDRSREQ TTGAVKKKLKERMDDFQVLREAIRQEYRDVVERRVFTVTGSRPDEETVDNLIETGRSE QIFQEAIQQQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVDAQGDMIN NIETHVSNATNHIQQGVSALQNAKKLQKNSRKWMCYAIILLLIIVVIIVVAVIQPWKK GA</aaseq>

Gene Sequence

<dnaseqindica>3560..3727#3391..3456#3203..3283#3004..3081#2772..2858#2314..2356#2144..2217#1708..1796#1557..1605#1337..1393#1126..1227#2..118#ggccacgccacgcctaactctctccctctctctctcctcgccgccgccgccgcctccacgtttctctctcctcgccgcgcgccggcgagacctcgccgccatgaacaatctcctcaccgtaagtagcatcctcctccctcctgatctcctcctctctcttttgctgctcgcgtcgagtggtcggggacacgggatccagtcacctgtcacccccagtggtgcagcgagctcgagatctgcgcgggcggggggttgtcatgtgcgggcttcgggaattcgggggaggtggtcgccgccggtggtgctgctaggagcagctgtggttgattgggttgtttttttttttttttttgcggcggtggaggagtggtaaggaggtggaagccgggaagggattgctttggcgtggcgtgggggaatcggaatgcgtcggtaggggcgggaaggaatcgtctgggtttctctgctgctcggcgaaaaatttgcagctgtcgggatgatcgggttagatctgctggtttttgctccgaggcagatgggcttgtgaattgtgattggagcaaatgggcatgtggtgctactggtttcgccatggttgccgtggagctcttctgggcgtataagggttgggtgttctgtttgtctccgagctttctgaatagcttttgatgtgaagtgatgcattgatattgtttgttgcagtcactatcgaattacacttgttgtatcaatgctattagctgttgcagttttagtaactcgtaatgttcgaatttccgtgggtttgatgtgctgaagaactccagaatgtttccttttgcaatctaagggtctgtgacgtgtttatttgcgcagagcgcatttcgttaggaattttgcgcacttcataatggcaagtaaaatgaaataataaaaatacctttttaggggaagttatctgttctgtcgcgaatacactggcctgtaattaatgtgctattcttcattgggcctcaatcttgttatttacttatttttagctggtgcaagtagcacagatggcttattgtattgttttatagtctaaccttcttcttgtaagcagtgaggcacatttgtccgtattataacattccagttttacaggattcgtttgagctccctcggggaggctcttcaagagatggggacattgaaatgggaatgcaagctgatccttcagacaatctaaaaggtttcttgaaaaaggtgctgtttacaaagcattttggtgtgtgcatcttgcattttgcagcagtattatattacccacttactagacacttcatattattgacatcttgctttgatacatcaggttgacgcaattgaaagcctaattgctaagctgacgaatctcttgcataagcttcaggtttatttatctcacacttccattcatttctttctgtttctggtccttgtcttgttctgatgatattgattttcgtagtaccagaaatataatgttgtgtctaagttttgatgaattcatttagcatcttgaattttcatatacaccttacttttgcttgtagactgcaaatgaggaatctaaagcggttacaaaagcaagggacatgaaaggtgagtacttagtttagtatatttaaccttgtctaaaaagttcttgtacacttttgataacccactttacctattgttgatgcaacaattatttttccatagcaattaaacagaggatggagaaagatattgatgaagtggggaaaatcgctcgcatggcaaagacaaaagttgatgaattggaaaaagatgtatgtcacttggccctgctagctaatggcattgtattaatttgccatatctgcgtaatattctgtttttatttcatgtgtctgcactctatatacaatatatataaatcatcaacagtcatatagcactgcagtaagtaacaaattgaccatgtctatccaacgtatgcattatattttcataagagcattctctgcaacttgtatcacaaggttatgatttagtagtgcccctaaaacaaattgtaggatttgctatacttttcactaagccatctcacgtgctagtgtcatttgtcaatagcaacattgagttgtctctcactgttcgctgccatgtgaaacagaacttatcaaacagacaaaagcctggatgtgggaaaggatctgcggtagatcgatcaagagaacagactactgggtaaatttactggcgatttgtttttttttcctggttctgtagagtgcataaagccatgaatagttgttcatccactatgcttgctaaattctacagagcagtgaaaaagaaattgaaggagcgcatggatgattttcaggtactgagtttccttatctggaacacctaacttgccatttatggggtgattctgctattccgtcaacgatcattacacagttaaactactgccatatttcattttctcggtctgttagacatgcttctttgagcagcagagaaaaaacacattgtttttccattgctagaagctatccaagtataagatttattgtatagcatttcatgagtagtgggtgtctatactgatacctgtatctacttgaagtaaaaaggaaaaaaatacattggtgaaatatgttatggtttgtactttcatcagctgtctctgctgctatgattcaattcttagtcactatgaacacctgctaggactagtgcaatgcccctaaagtggtgacttgtgagtaatgcccctttaccctctgatgtaggttttgagagaagcaatccggcaggagtatcgtgatgtcgttgaaagaagggtgtttacagtaactggtagtcgtcctgatgaagaggtatacaatgacaggatctctgcagttctgacttttggttaaatttgttttcttcatgcctttgctttacagtgaaaattttgatctgtggtctgatgatcttcgatttacactatttctcatgttgttgctttgtactatgtagacagttgacaatttaatagagactggaagaagtgagcaaattttccaagaagctatccaacagcagggaagaggccaagtatgttatccaatatatgcatttctttctgtatgggataatgcctttttggggaccaactacatttttgcggttctgcctgttcacagtactaaaatctcaaccatatttgtctttccagatactggacactgttgcagagatacaggaacgtcacgatgctgtaagagatctagagaggaagcttctggagttgcagcaggtgacttttttgacataagcacttatttactaatctgatttaatccatatgcttgtgagctcgagttaatgtgcctaattactccattccttgtttttgccttgtagatattcatggatatggcagttttggttgatgctcaaggagacatgatcaacaacatagagacacatgtaagaattgcccactcttgcaccaagttatacatgttcttggaagcaagacaaactgtatatcaccaagaattcaccttattttcgttttctctgcttcaaggtttcaaatgctaccaaccacatacaacaaggcgtcagtgctctacagaacgcgaagaagctccagaagaactccaggaagtggatgtgctacgccatcatcctcctgctcatcatagtggtgatcattgtcgtcgccgtcatccagccatggaagaagggtgcttgattgtaacttggaaaaagaagatcgtgggatatatttttttccctgtttgtgcaatatgtgtagttgtgtctccgattccctcctacccctgtacgtatgcttaacaaaacaacatgatgagattgagattcgtttgcccttaggcgcaggttgattcatcttcataccagatttcctgtgcaatctaccacgccaggggttatgtgtgaaacaatggtcccatcagtctcaacaaaaattgtgaattcctggatcttttac</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0164300, RefSeq:Os07g0164300