Os09g0452800

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Revision as of 07:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0452800| Description = Peptidase A1, pepsin family protein| Version = NM_001069873.1 GI:115479488 GeneID:4347233| Length = 1447 bp| Defini...")
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Gene Name

Os09g0452800

Description

Peptidase A1, pepsin family protein

Version

NM_001069873.1 GI:115479488 GeneID:4347233

Length

1447 bp

Definition

Oryza sativa Japonica Group Os09g0452800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17631193..17632639

Sequence Coding Region

17631225..17632586

Expression

GEO Profiles:Os09g0452800

Genome Context

<gbrowseImage1> name=NC_008402:17631193..17632639 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:17631193..17632639 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggggggtttcggtggtgctcgtgctgatagcttgttggctgtgtggctgtccggtggccggcgaggcagccttcgccggcgacatccgtgtcgacctgacgcatgtcgacgccgggaaggagctgccgaagcgcgagctgatccggcgagccatgcagcggagcaaggcgagggcggcggcgctgtccgtggtgaggaacggcggcgggttctacggcagcatcgcgcaggcgagggagcgggagcgggagcctggcatggcggtgcgcgcgtcgggcgacctcgagtacgtgctcgacctcgccgtcggcacgccgccgcagcccatcacggcgctgctggacaccggcagcgacctcatctggacgcagtgcgacacgtgcacggcctgcctccggcagcccgacccgctcttctccccccggatgtcgtcgtcgtacgagcccatgcggtgcgccggccagctctgcggcgacatcctgcaccacagctgcgtgaggcccgacacctgcacctaccggtacagctacggcgacggcacgacgacgctggggtactatgccaccgagcggttcaccttcgcgtcgtcgtccggcgagacgcagtccgtgccgctcgggttcggctgcggcacgatgaacgtcggcagcctgaacaacgcctccgggatcgtcggcttcggccgcgacccgctgtcgctcgtgtcgcagctctccatccggcgattctcctactgcctcacgccgtacgccagcagcaggaagagcaccctccagttcgggtccctcgccgacgtcggcctctacgacgacgccacgggccccgtccagaccacgccgatcctgcagagcgcccagaacccgaccttctactacgtcgcgttcaccggcgtcacggtcggcgcgaggcggctgcggatcccggcgtcggcgttcgcgctgcgccccgacggctccggcggggtgatcatcgactccggcacggcgctcacgctgttcccggtggcggtgctcgccgaggtggtgcgcgccttccggtcgcagctgaggctgccgttcgccaacgggagcagccccgacgacggcgtgtgcttcgcggcgccggccgtggcggcgggcggcgggaggatggcgcggcaggtggcggtgccgaggatggtgttccacttccagggcgccgacctcgacctgccgcgggagaactacgtcctggaggatcaccggagggggcacctgtgcgtcctcctcggcgactccggcgacgacggcgcgacgatcggcaacttcgtgcagcaggacatgcgcgtggtgtacgacctggagcgggagacgttgtcgttcgccccggtggagtgctga</cdnaseq>

Protein Sequence

<aaseq>MRGVSVVLVLIACWLCGCPVAGEAAFAGDIRVDLTHVDAGKELP KRELIRRAMQRSKARAAALSVVRNGGGFYGSIAQAREREREPGMAVRASGDLEYVLDL AVGTPPQPITALLDTGSDLIWTQCDTCTACLRQPDPLFSPRMSSSYEPMRCAGQLCGD ILHHSCVRPDTCTYRYSYGDGTTTLGYYATERFTFASSSGETQSVPLGFGCGTMNVGS LNNASGIVGFGRDPLSLVSQLSIRRFSYCLTPYASSRKSTLQFGSLADVGLYDDATGP VQTTPILQSAQNPTFYYVAFTGVTVGARRLRIPASAFALRPDGSGGVIIDSGTALTLF PVAVLAEVVRAFRSQLRLPFANGSSPDDGVCFAAPAVAAGGGRMARQVAVPRMVFHFQ GADLDLPRENYVLEDHRRGHLCVLLGDSGDDGATIGNFVQQDMRVVYDLERETLSFAP VEC</aaseq>

Gene Sequence

<dnaseqindica>33..1394#aacggggcgttttggttaggagataattagacatgcggggggtttcggtggtgctcgtgctgatagcttgttggctgtgtggctgtccggtggccggcgaggcagccttcgccggcgacatccgtgtcgacctgacgcatgtcgacgccgggaaggagctgccgaagcgcgagctgatccggcgagccatgcagcggagcaaggcgagggcggcggcgctgtccgtggtgaggaacggcggcgggttctacggcagcatcgcgcaggcgagggagcgggagcgggagcctggcatggcggtgcgcgcgtcgggcgacctcgagtacgtgctcgacctcgccgtcggcacgccgccgcagcccatcacggcgctgctggacaccggcagcgacctcatctggacgcagtgcgacacgtgcacggcctgcctccggcagcccgacccgctcttctccccccggatgtcgtcgtcgtacgagcccatgcggtgcgccggccagctctgcggcgacatcctgcaccacagctgcgtgaggcccgacacctgcacctaccggtacagctacggcgacggcacgacgacgctggggtactatgccaccgagcggttcaccttcgcgtcgtcgtccggcgagacgcagtccgtgccgctcgggttcggctgcggcacgatgaacgtcggcagcctgaacaacgcctccgggatcgtcggcttcggccgcgacccgctgtcgctcgtgtcgcagctctccatccggcgattctcctactgcctcacgccgtacgccagcagcaggaagagcaccctccagttcgggtccctcgccgacgtcggcctctacgacgacgccacgggccccgtccagaccacgccgatcctgcagagcgcccagaacccgaccttctactacgtcgcgttcaccggcgtcacggtcggcgcgaggcggctgcggatcccggcgtcggcgttcgcgctgcgccccgacggctccggcggggtgatcatcgactccggcacggcgctcacgctgttcccggtggcggtgctcgccgaggtggtgcgcgccttccggtcgcagctgaggctgccgttcgccaacgggagcagccccgacgacggcgtgtgcttcgcggcgccggccgtggcggcgggcggcgggaggatggcgcggcaggtggcggtgccgaggatggtgttccacttccagggcgccgacctcgacctgccgcgggagaactacgtcctggaggatcaccggagggggcacctgtgcgtcctcctcggcgactccggcgacgacggcgcgacgatcggcaacttcgtgcagcaggacatgcgcgtggtgtacgacctggagcgggagacgttgtcgttcgccccggtggagtgctgagagggcaccacgtgtcaactgaaaatcactgtagttatttttttttctttcta</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0452800, RefSeq:Os09g0452800