BGIOSGA008008

From RiceWiki
Revision as of 18:49, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA008008

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008008, complete gene.

LocusTag

OSJNBA0073G17.1

Ensembl Transcript ID

BGIOSGA008008-TA

Ensembl Protein ID

BGIOSGA008008-PA

Length

4748

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:11990569..11995316

Sequence Coding Region

11990569..11991240,11992619..11992720,11993627..11994256,11995056..11995316

Genome Context

<gbrowseImage1> name=IndicaChromosome02:11990569..11995316 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:11990569..11995316 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTAGACCTTTGCCTTCCCAGGGGAAAGAAGTTATGGTTGGCTCTAAAGGTGTTATTAAGAGGGATGAATTTGTGAGGATAATCACAAAGGCTCTGTATAGCCTTGGTTATGAAAAAAGCGGAGCAGTTCTTGAGGAAGAATCAGGAATAACTCTGCATTCCCCAACAGTGAATCTTTTCAGAAGGCAGGTACTTGATGGGAATTGGGATAGTGCAGTGGTTACCTTGAAGAAGGTTGGCCTTTTGGACGAAAACATTGTAAAGTCTGCTATATTTCTGATACTGGAACAAAAATTTCTTGAACTTTTGAGAAATGACAATGTCATGGGTGCTATAAGGACTTTGCAGAGTGAAATTACACCACTTGGTGTCAACAAAAAAAGAGTTCATGAACTGTCAGGCTGCATAATTTCTTCTCCACAGCATGTATTACTTGGTTTTTCGAAGCTTGGCATTGAATCTTCAAACTCACGGCTGAAGCTGCTAGAGGAATTGCAAAAGGTGCTTCCCCCAACTGTTATGGTACCAGAGAGGAGGTTAGAGAATTTGCTTGAGCAAGCACTTACTGTCCAGCGTGAAGCTTGTTATTTCCATAATTCTATTGATGGCTTGTCACTCTACACTGATCATCACTGTGGGAAGGATCAGCTACCATCTTGCACGGTGCAGGTTCTGCGTGCACACCGTGATGAAGTATGGTTTCTTCAATTTTCAAACAATGGAAAGTATTTAGCCTCAGCATCAAATGATAAATCCGCAATCATATGGAAGGTTGATGAAGATGGAGAGCTATTGCTAAAGCACACATTGACTGGTCATGACAAGCCAGTCATGATGGTTGCATGGAGCCCTGATGATTGCCAGCTTCTCACATGTGGAATGGAAGAAGTCATTCGGCGTTGGGATGTTGAATCTGGCAAATGTCTTCATGTTTATGAAAAGTCTGGCATTGGTCTGATCTCATGTGGTTGGTTTCCAGATGGAAAGCATATATTGTCTGGTCTAACTGATCATAACTTTTGCTTGTGGGATTTGGATGGTAAAGAAGTAGATTGTTGGAAAGGCCAGAGATCATCTAAAACATCTGATTTTGCCGTATCAAACGATGGCAAGCTTATAATAAGCATGAATAGAGAGTCCACCATTCGTTTATTTGATCGGGAGACAAAACAGGAGAGATTGATTGAGGAGGACAACACAATCACATCATTTTCTCTTTCAGAAGATGGTGATTTCTTGCTTGTAAACCTTATAAGTGAGGCGATTCATTTGTGGAACATAAGGAATTGCCCCATTCGAGTTAACCGGTATGCTGGTCATAAGCGCAGCCGGTTTGTGATAAGGTCTTGTTTTGGTGGATCCGAGCAGGCCTTTATTGCTAGTGGTAGTGAAGATTCACAGATCTATATATGGCATAGAGCTACTGGAGATCTTATTGAAACTCTGCCTGGTCACACCGGCACGGTCAACTGTGTGAGCTGGAATCCTGCGAATCCGCACATGCTTGCATCTGCAAGTGATGATCACACAATTCGTATATGGGGTTTAAAGAAGGCCAATCTGAAGCGCAAGGATGTTGGCAGCAGCAATGGGATCTATGCAAATGGTAATACACCCAGCAATGGTGTGGTACACCAGTGCAACGGGAACAGCAGCAAATGA</cdnaseq>

Protein Sequence

<aaseq>MARPLPSQGKEVMVGSKGVIKRDEFVRIITKALYSLGYEKSGAVLEEESGITLHSPTVNLFRRQVLDGNWDSAVVTLKKVGLLDENIVKSAIFLILEQKFLELLRNDNVMGAIRTLQSEITPLGVNKKRVHELSGCIISSPQHVLLGFSKLGIESSNSRLKLLEELQKVLPPTVMVPERRLENLLEQALTVQREACYFHNSIDGLSLYTDHHCGKDQLPSCTVQVLRAHRDEVWFLQFSNNGKYLASASNDKSAIIWKVDEDGELLLKHTLTGHDKPVMMVAWSPDDCQLLTCGMEEVIRRWDVESGKCLHVYEKSGIGLISCGWFPDGKHILSGLTDHNFCLWDLDGKEVDCWKGQRSSKTSDFAVSNDGKLIISMNRESTIRLFDRETKQERLIEEDNTITSFSLSEDGDFLLVNLISEAIHLWNIRNCPIRVNRYAGHKRSRFVIRSCFGGSEQAFIASGSEDSQIYIWHRATGDLIETLPGHTGTVNCVSWNPANPHMLASASDDHTIRIWGLKKANLKRKDVGSSNGIYANGNTPSNGVVHQCNGNSSK</aaseq>

Gene Sequence

<dnaseqindica>1..672#2051..2152#3059..3688#4488..4748#ATGGCTAGACCTTTGCCTTCCCAGGGGAAAGAAGTTATGGTTGGCTCTAAAGGTGTTATTAAGAGGGATGAATTTGTGAGGATAATCACAAAGGCTCTGTATAGCCTTGGTTATGAAAAAAGCGGAGCAGTTCTTGAGGAAGAATCAGGAATAACTCTGCATTCCCCAACAGTGAATCTTTTCAGAAGGCAGGTACTTGATGGGAATTGGGATAGTGCAGTGGTTACCTTGAAGAAGGTTGGCCTTTTGGACGAAAACATTGTAAAGTCTGCTATATTTCTGATACTGGAACAAAAATTTCTTGAACTTTTGAGAAATGACAATGTCATGGGTGCTATAAGGACTTTGCAGAGTGAAATTACACCACTTGGTGTCAACAAAAAAAGAGTTCATGAACTGTCAGGCTGCATAATTTCTTCTCCACAGCATGTATTACTTGGTTTTTCGAAGCTTGGCATTGAATCTTCAAACTCACGGCTGAAGCTGCTAGAGGAATTGCAAAAGGTGCTTCCCCCAACTGTTATGGTACCAGAGAGGAGGTTAGAGAATTTGCTTGAGCAAGCACTTACTGTCCAGCGTGAAGCTTGTTATTTCCATAATTCTATTGATGGCTTGTCACTCTACACTGATCATCACTGTGGGAAGGATCAGCTACCATCTTGCACGGTGCAGGTAATAACTTATATAAGTGCTTATTTCAGTTTATAGTGTTATGAATGAAGGTTGTATACTTGTCTTGACTGCTTATACACCCACATAAGAATGATTTCTTGGCCTACTGCTCTGTTGTTCTGTTCAACCACTTAAAATATTTTCTTGATCCACCACTGGGCAATTTTATTTAAAACATTCCTCAAATACTGCCTTTGGCCACCATGAAGTAATTCTCAGAAGGTTGTTACTATAATGTTGTTACCAGACTAGAGAGGAGATTTTTGTTAAAAGCAGTCCAATAGCTTATTACTGAATCTTGTTACGAAAGGTCCTACAATAGATTTATTATAGCATGAATATGTTGTGTATCACTTCTAATGGCTCTGCAATACGCTTTATATAGTAATGAGCTTCTCTGTAGTCCAACTGGTTAATGCTATCTTGGGCCCTAGCGCTAACTTGTTACTGATGCAAGTGTCAAAGTTCTCTCCCTTCCCTCCCCTCCTACTAAACAAGTAAACTGCACTATTGTGAGTGCTCAAGTGCTCTGTGTTTTTGGATAGTAAAACAGAAGTTACAGAACAGTTTACATGGAAGCAGGAAAACTTCAACTTTAAAAAGTTCAGCCTGCAGTTGTAGTAGGCATGGACCAAGTTTTTCTTGCATATTCCTGAAATATATATATTTACTATTTAGATAAAGTAACATAGTTTGATGCAAAATTCAGATTTGGATCAAGAAAAGATTTGGCTTAAAATTTTTATATCAGATAGAGCAAATAAGAAATATGTGCTACTCATCTTCTCTCATTCTGGAAAACATTGCCTTTACTATAAAATTAGATGGAAACCTAGCTTTTTGCTATGGGAAATTTGCCTGACTAAACGCTAAACATGAGGTGTAAGTTGAATCCGTGTTGTGGCTAGGTGGCTGGGCTTTGGTGTGTTTTTGTGGGAAATTTGCATGGAGAAATGTAAACACAGGGCCTTTTTGGCACAGCTCCAGCTCCAGCTCCAGCTCCACATCTTCTGGAGCTGGAGCCTAGCTAAACAGTTTCAGCTCCACCTAAAATGGGAGCGGAGCTGGGTGGAGCACTCACACAAAATGAACTAGAGAGGTTTAGCTGGGTTTAGGCTGCTCCACAACTCCACTCCAAACCAAACTTCTGGAGCTAAATTTAGGAGTTAGAGCTCTACCAAACAGGCCCTAATGTGCAAGGTGGATTTGCTTTGTGGTTTTCTATAACCATGCTTTGTCATATACTCATATTTTTTACCGTTGGGTGATCAACTGCTTTTTTTTTCCCGTTAAGTTATTCGCCAAGACTTCTCTTTGCTGGCAGCTCCATATCTCAAAATTCACTGGTACTAATCGCACATTAAAATTCTTGTTGCAGGTTCTGCGTGCACACCGTGATGAAGTATGGTTTCTTCAATTTTCAAACAATGGAAAGTATTTAGCCTCAGCATCAAATGATAAATCCGCAATCATATGGAAGGTAAAAATTACGAATCTATCCATGAACATAGTGGCTTATTTGCATGGAGCTGTTTGTTTAGCAGTCCAATAGCCTGTTGTCCCTGAACTTCCCATTTTGCACCTTTGGTCAAATCATGATTTTGCACAAGTTCATTCAGGCCTGATTGGGTGGGAGGATTTGGATCCTTTCATTGAATTAAATCCGAGACATTCTTAGAACAATCCCTTCTGTACACCTCAGGTTTTGTGTCTCTGCTGTTACTTCTGTCTGAAGTGAATTCTGAAAAAAAAAAACGATCTCTGAAAATTAAGATAAAATATTGCCATTTATCTGATCATTTCATCAGTCTACTTGAGAGTTATCTCCAGCTAGCTTTATCAGCAAGGAATCTAATATAGATATTTGCCAATTTTGCCCTATGAACTTGTAGTATAACACCTTTTTCCCTAGCTTGTAACTATTGCCATGAAAGTGCATATTTTCTCATCTGGTCACAGTAGTCTGTCTTACATTCCACCTAATCTAAGTTGGTTCTTATGCATGTCATTTTCAGTTTAATTAGCTGAGCTTATAGTCATCTGGTATATCTATGCCCAAGGACATTAAATTTTTGAAACTTATTCTTCAATTTTTTTCGTCAAGTCTTCTTCACAATTCGAATCCTCATTAGATCTCTTTGCAGCAGGTTGGCATAAAATAAAATTTTAATTTCTTGGTCTCACAGTTTCTCCCCTGCAACAATGCTTTATTTTAGTGACTGAATCTCCTCTACAAGATTTTCCCTTTGTCTTATGGAAATTAGTATGTTGTATTTAATCTGTTGCAGAGAACTTCATTATATGTTTTGTTTTTGTTATTGATCATGATGTAAAGGGTCTTTTCTTGATATTCTCTTGATGCAAAGCACATGCTATCATTCCCTAGGTTGATGAAGATGGAGAGCTATTGCTAAAGCACACATTGACTGGTCATGACAAGCCAGTCATGATGGTTGCATGGAGCCCTGATGATTGCCAGCTTCTCACATGTGGAATGGAAGAAGTCATTCGGCGTTGGGATGTTGAATCTGGCAAATGTCTTCATGTTTATGAAAAGTCTGGCATTGGTCTGATCTCATGTGGTTGGTTTCCAGATGGAAAGCATATATTGTCTGGTCTAACTGATCATAACTTTTGCTTGTGGGATTTGGATGGTAAAGAAGTAGATTGTTGGAAAGGCCAGAGATCATCTAAAACATCTGATTTTGCCGTATCAAACGATGGCAAGCTTATAATAAGCATGAATAGAGAGTCCACCATTCGTTTATTTGATCGGGAGACAAAACAGGAGAGATTGATTGAGGAGGACAACACAATCACATCATTTTCTCTTTCAGAAGATGGTGATTTCTTGCTTGTAAACCTTATAAGTGAGGCGATTCATTTGTGGAACATAAGGAATTGCCCCATTCGAGTTAACCGGTATGCTGGTCATAAGCGCAGCCGGTTTGTGATAAGGTCTTGTTTTGGTGGATCCGAGCAGGCCTTTATTGCTAGTGGTAGTGAAGATTCACAGGTATGGTGATTTTGCTTGATGGCCACCTATCACTATAAAATAATGATATGGATGTTGTTAAATTTCGTTGTTACAGTGTTCTTCTATTACTTGTGCTAATGATTGGCATTCTGCATTCTAGATTTCCTCAGTATGTAAGGAAAATATAGTCATAGCATACGTAAACATCCTCAATACATTGGATTATTACACTGTATACAAAAACATCACTACATCTAGTTCACTTTTGGAACCTTGCACAGTACCGCAAATGTATTAATGTTTAGGCCTGTTCTTCAGATTTACACTGTGTTTTCTTGTTATCTAGGCATCGACCACCTCATTTTCTCCAAAATGTTATGAATGCATAAATATTGATTGCTGTTTTATCAAGTCTAATGACTTGGAACGGCTGCTGCTGATTTTATTTTTAGAATAGAGGTGACAGATGAGTTTAAAGTTTAATCCAAATAAATATGCATTATTATGTTGGGATATTTCGTCAGAATTTACTGTCTTTATACTGATAATTAGTAGTCTACCAGATAGAACCATTTAGTATTCCAGTAATGGCACCCATTATCTGATATACAAAATTAATATGGAAAAGAAGAAAGATGAAATGCTACAAATTACTTTGGATGGAGCTAGTTAAGTCTCAAAATTGTTATGGCAAACAAAGTGTGGAGCTATGTGCTGTCTAGCGTGGTCTAACCACTAGATTGTCACGCATCTTTTCCTATCATCTGCATCTATATATCTTGTCCTGTCTTCTGCAACTTCCGTAACCTCAAAATCTGGAATAATTTTCCTACTTCAGATCTATATATGGCATAGAGCTACTGGAGATCTTATTGAAACTCTGCCTGGTCACACCGGCACGGTCAACTGTGTGAGCTGGAATCCTGCGAATCCGCACATGCTTGCATCTGCAAGTGATGATCACACAATTCGTATATGGGGTTTAAAGAAGGCCAATCTGAAGCGCAAGGATGTTGGCAGCAGCAATGGGATCTATGCAAATGGTAATACACCCAGCAATGGTGTGGTACACCAGTGCAACGGGAACAGCAGCAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008008