Os07g0166800

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Revision as of 08:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0166800| Description = Rad6 (Ubiquitin carrier protein)| Version = NM_001065508.1 GI:115470748 GeneID:4342488| Length = 7732 bp| Definitio...")
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Gene Name

Os07g0166800

Description

Rad6 (Ubiquitin carrier protein)

Version

NM_001065508.1 GI:115470748 GeneID:4342488

Length

7732 bp

Definition

Oryza sativa Japonica Group Os07g0166800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3618259..3625990

Sequence Coding Region

3621798..3621926,3622572..3622660,3622780..3622869,3625522..3625547,3625757..3625881

Expression

GEO Profiles:Os07g0166800

Genome Context

<gbrowseImage1> name=NC_008400:3618259..3625990 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:3618259..3625990 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgacgccggcgaggaagcggctgatgcgggacttcaagcggctgcagcaggacccccccgcggggatcagcggcgcgccgcacgacaacaacatcatgctctggaacgccgtcatcttcgggccggatgatacgccgtgggacggaggcacgttcaagcttaccttgcagtttacagaagattatcccaacaagccgccgactgttcggtttgtttctaggatgttccacccaaatatttatgcagatggaagcatctgcttggatattctacagaaccagtggagccctatatatgatgttgctgccatattgacttcaattcagtctttgctgtgtgatccaaaccccaactctccagcaaactcagaagctgccagactgtttagtgagaacaagcgagagtacaaccgcaaggttcgtgagatcgtggagcagagctggacagctgactag</cdnaseq>

Protein Sequence

<aaseq>MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPD DTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDV AAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRKVREIVEQSWTAD</aaseq>

Gene Sequence

<dnaseqindica>4065..4193#3331..3419#3122..3211#444..469#110..234#cacgattctctcagagagagagagagagagagagaggggactcagcgagcggtgggcgagagggggagatcgaaaccctagctagggtttgcgcgcggcggcggcggggatgtcgacgccggcgaggaagcggctgatgcgggacttcaagcggctgcagcaggacccccccgcggggatcagcggcgcgccgcacgacaacaacatcatgctctggaacgccgtcatcttcgggtgggtgtcagccatggacgcggaattcccatctgcctctacctctctccccccctccccctctcctgcgccggccccccggtgttctagggtttcggtgtccccggatctcgggggacccgaggttttcagctgtttttttttgtttttttgttgtagtggctgtggtgctaacgaggaattgttttccgtgtgatgatgttttgcaggccggatgatacgccgtgggacggaggtgaggcttgctcggtttggttttgctccgatctgtagctggtttagtgattaggttgtggtttactaattccttggggatggttcgatgtggaaattggaatcgttaggatggatatagcatcatgagtattttgcccagggagatgagaccgagtgagtgggcagctgattccacataaacttagaaggcagatgaggattgtctgttgttgtctatgtcggtcttgtcggatatgtggggagatcgagccatgcaattctggaagggtcattacagggttaggctattggctagatgtatgaattccttaacacgtaaaattgaaaacgacaaaaatacatggcatacttatgatgcctgtcacctaagcagctctaattgaggtgcgctgaaactgtcatttggtaattttggtttatgtgaattctacatgataattgctagagtaggcatggtttcattagactagtcaacaaatgaaccttgccatatctatcacatattcaataacagaaatgccgatttaggtcctgttcgaatccactgaaagaagtgtataaacttttgggtaaaagtggcacgcttttcaaattgctaaacggtgcgtttcgtgcgaaagctttctatatgaaagttgttctaaaatatcagattaatccattttttcaagtttgtaataattaaaactcaattaatcgcactttattaccacctcattttgcgtgaaacacttaatccttatcttcatcttcatcttcaggagattcaaacaccaccttaaacatactctagaaattagagtgactgctgcatttactgtctaaaatggagtaataaagttgggagttggtgtgagcttgcctgggaagtaggttgcatgtttggttcaggaaggtaggttctactatttgaaatatattgttttggaagtgcataacacatgaaggaataaataacctacaaataattatggatagagttaaccatgttgccatgtgacacttattgtgcatgttttgagcatgtggtgccccgaattatctgttcgacaaatcagggcactgtatattttttgctgttttgtcttaatcagttcgcaacgaacttaactatttgactgaatctgattatgatctgcacatatataaatttaagttaagttatggtgtcagatattttccaacaactaacattgccctttttatggaaaagaactttctgtttttttctcagagttcaggtcttcttcttttcccctcttctatttgagttgcgtaaacctcaagttacgtcttagatatatgattgatgatactacggttctgttgcacaaaccaatttgtaaggatggatgttaaatcctctatgcaaatcttggtgcctgtttattttatactgtttatgtaggttttagtgtaagttgagctgtttaaaagatttactttgttttgcttttgagtttcagtcttgttttgaaaataaaatgagtacacacttatcttttaaatgcatagcttaactgcatgcctacagtgcaagaacccttaaaattcttaggccatgatcctaccaaaagaaaagagaatgtcatgatgatgtggttatgttatgggcgtagaaaaaggatactagtgggaatgcttgggtttgcgtcaaattttacttcatttcttctctgtggttgtttattccagtgttgttgaggcggtaatgcagtttaaggcaacccaccactgcgaggcgtaaggcgttgcgacgccctatgagatggttgaggcatgattaatggaggatatggtagagaaattaggaagaaaaaaagggaaaccggtaaaaggcccactaatccaggcagccagcccaccaaagcccaacataagtcttcatacctacgtgttctatgccctaagaggcatcttactccaccaggcaccagctgccatgatgagaagaggagtccccagctgctggcctcatccacatgacctctactagggttctaggatgagcttacctcttcttctttccctttctttattggttttgcttgtaaggcctttttctttccctttcttcacagtggacaccttggcctctgtgaccgccttagcgctatacgccttaacaacctgggtttattctttaattcttctcatgtgaaatccttgtctgtaatgtagtaatgttgtatgacatattatcttccctacaactctatctgcattatgtgatactgctgcagttctgtacccctatagtcaggccatacagttaaatactcagagccaggagagcttgcactagcactattatttttatatgatgaaagatgtggtcttttgtgtattggttcctgattgttcttatctatcattgatctattgcttatatgacatttctttagcctttgttgtttaatttcattagttatagatagccttgaatcatctacagtacggcaaaagtgatgaatgcagatgtttgggaattcgggattatggttattagtaagacaatagttctgatacaggacaacagacaaccaaaagccacataatgattaatcatgcttcaactttttgtagctaccagtctgccagcatggtaacttgagaagtcgactaacagttaactcttacgtatctgtaggcacgttcaagcttaccttgcagtttacagaagattatcccaacaagccgccgactgttcggtttgtttctaggatgttccacccaaatagtaagctctcttcccgtgtgattatatattgttcaataattaccttacatttgtaaacaaataaagatcttcgtttttgaataatggaaaacttatttaacatcatactattcatgcagtttatgcagatggaagcatctgcttggatattctacagaaccagtggagccctatatatgatgttgctgccatattgacttcaattcaggtacctttttgatcaattttcagactagcaaaaagcatttgtaatgccatgaagagtagtgcttaccatgagtaatgagatctttctaggtgcattattttacagcttccaaggtcatgcaaattactttttgtggagaaactttaaacttagttgcactgttgtgcgtaaaaacctctttacaacattgtcatggaaacctactagaatgaacctcttacactttacagattggcagttggagcattatttatctggcacatttattcttacgtaagaatgaatcctcctaaaaattttgcacttgaatggaggttttcccctgtaactttataactagctctggttgatcagttcactgactgggggacagtgactaaaattgaactcattttattggaagctaattccaaagctccctcacaaatgtccactacactatttatagccagttagcacttagcagggtgccattgtccgaactttgtaagcatgttagtaagatcatttgatgatataatcggttaggttgtttgcttctacacaccaccatttccaatggttgtataggctacgtagcatgcatgtagcatggtattgtatcaaatacttgaatcgctgaattgtgatgcatttgctttgcagtctttgctgtgtgatccaaaccccaactctccagcaaactcagaagctgccagactgtttagtgagaacaagcgagagtacaaccgcaaggttcgtgagatcgtggagcagagctggacagctgactagggcatgcagcagggcaacgggtggtatccaccatgccagaaagatgcaataagcaaccgtgaaaaacctgtgcgtttctggctctccagatttgctgtcatcttaaaacattataagatctccagtgattgcttgtagtccgttgatgtttttgtgttcccatgtcccagttactcttggctgcttttatgtagtggtgttgacctctcatgcactagggcattctgctcatgtaaaaaggggattatcatcataatatgtgaatggaagcgaaatgggtcatgagatttgagtctgcttgcacaatgcagtttgtctgcatgatccttttgccatgtagtttggctgttggtgctgtcctatgcacatgcttaatattctctgccgtttggattttttgcaacattttgtatttttgtaggaacagaaaaaaaaattcccgtgatacttctcatgatacaaatggtaccaaactgaaatttatcgttcctcgagtgatgctttcgtatggtataaagaagggtttttaggcccctttgaattggaggattgtgaattttggaggatttaatgtcctaaggattttttcctatgaaacctttgattcataggaaagtataggaaattttctttaggattgcattcctatagcccaatttcataggaaaataagtaagaggtttaacctcttggaaactatcctttgctttgtttgttttctatggtgatattttctgtgttttccattcctgtagaattaggaaaacatgccacatcaattcctacgtcgggtttttaggcccctttgaattggaggatttaatgtcctaaggattttttcctatgaaacctttgattcataggaaagtataggaaattttctttaggattgcattcctatagcccaatttcataggaaaataagtaagaggtttaacctcttggaaactatcctttgctttgtttgtttcctatggtgatattttctgtgttttccattcctgtagaattaggaaaacatgccacatcaattcctacgtttttcctattcctttgtttgtttcctatggtgatattttctgtgttttccattcctgtagaattaggaaaacatgccacatcaattcctacgtttttactattcctgtgttttttctattctgcgtttcaaaggggccctaggtaaagtagtgctcttgattggtgtcgggggcctggggatatctccttttacttgtccatgtaaaggtctaaaacaacaaatgcgatacatggtattgacaccattgacacaatgataaccgaagtgcccctacagaggacatgccataaacgaggtactgaaccatgattacatttagacctagattcgtagtgagacatttatagtcctagattcaaagtgggaaaaattacaaaattacagttgtgcttagcttcttacatattcaaaagaaacatatagaaaaggcggtaaaaaaaaagaagataaaaaaaatgtgaagaaagtaaaagagcccactgacttctactggtctacaccaagaaggccctatacacatcttatcttatagggtagtagtacaccatatgccagttccagtctagcttcagctgcagctgccatctgaattgttctctcatgttcggttcttgaaagatcacactgcaaaatgtttgcttcatgtaatgtttcccgctgaattgccgttgctgttcttgcctcaacctagaaatccaagaaaacacaagaaaatatcatctcagatcatagctgaatgcataacatttccctcaactatcagccatggatgatcagagcatgatagttcagatgctcaaagtgcaaggtttggtttgtttggtgatagatacctgcaggctatgatggagtatcatctacagatctactggtcgtcttctaagtctctggggatctgcgacggcgacagcggcgactcctcgctgctccgggagtcccctctccagtcatcctgcacctgcgcggcgaactgcaggttccacagcacgtcctccaccgacggcctctgcaccgcctccttggccaggcacctcaggcagatctccatcaccgtcttcaccgactcgtcggagcaccccttgctcaccgccgggtccacaaagctcctcctcttcgccgtcccctccgccgtcagcgccgattgcagctgcagaaagaacacaggtgagtttctttttttctttttcagaactttcagaagtggacagtgtgatggtagtatctgaagtctcatgaaaaattcagttcagtttcagtctttggagggagtttgtgttgcacctgttctttcattatctccacctcgtagatggatgtgatgggcctgcctgagataacctcgagtagtatcacgccgaaatcgaagatgtcgagcttatcaccgttcggtacactgcgagaagaaatttgcaacagaaaagttcttaagaaaaccagttgcttttagtataatatacatagattctgctgtaaggtgatttgtcaagtacctatcagatggatacttgttgccagatcctccctgaattcatccacaaaagatgatataaaacaacaatgttagttcagagttcagacagtgccaactcaaaattcagcggtaagtttacatgatcagagtttcctgaatcatacctcggatttcatggtttcagataggatggggatattgtagctgcctattttggcaacaagattctggtctagaagaatgttggtgatcttcagattattcgcaaataggccaggtatgatccctccatgcaagaattgaattcctttggcaacaccaatggctgttgatatcctctgcacccaggtgagctttctcccttctgttccttctgaagtcaaaagtatcaacaagttcagtgacattcagctaaccgagtaactgattattggagaccgatttcaggagaagatggtaaacttacgtgaaattctgcctctcaggttgccattctgaacgtattcgaagacgagatacaattgcgtgatggtggaatcgtcgagattgtattcgaagcagtgtccaagtgcactgaccaagtgcctgtgcctgagcttggagatcatctcaatgtggtgattgaagctctgggaagtctggctcctcttcaccttcagagacctgattgtcaccggagttccattgcttagccttcctcggtacatctgacagtaaaaaagagcaaaccattttagacatggagcacaacaattttagttgcaaacttgctatgttacaacttgcacatgcctcaaaagaaaaggtgattcttgaatagattgaaaaatatgtatggaaagatggctttggtactctgacaagaaaaaagagagaaagcttgtaataactataaaaactgttctctttaatctttataccccaattgtaatctagcagtagtatttaactcattagaataatcagaaaagtgaatgggggcataaagcatactgtcaattaacaagaacatgaaaaattaggttc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0166800, RefSeq:Os07g0166800