BGIOSGA008208

From RiceWiki
Revision as of 18:50, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA008208

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008208, complete gene.

LocusTag

OsI_07210

Ensembl Transcript ID

BGIOSGA008208-TA

Ensembl Protein ID

BGIOSGA008208-PA

Length

4364

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:17647953..17652316

Sequence Coding Region

17647953..17648285,17648381..17651641,17652236..17652316

Genome Context

<gbrowseImage1> name=IndicaChromosome02:17647953..17652316 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:17647953..17652316 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGACGAGATCGCGCGCGCGCAGGAGCAGCGCCGCAATGTGGAGGACGATGCCCTCGCGGCCGTATCCTCCGTGCCCTTCGACGCCGACCTCTACGGCGGCGTCTCCGACCCCGACCGCTTCGCCGGCTACGAGACCTCCATCGCGGCCACCGCCGAGGACGACGACGACGACGACGACGCGACCGAGCCGGTCAACCCCGCCGCCCGCAGCCTTGCCTCCTACTCGGGCCACGCCATCGCCTCCTCCTCCTCGGGCCTCCCCCGCGCGGCGGATGAGGAGGGTGACGGGCTCCGCGCCCGCGAGGGCGAGTACCACCGCCGGCACCCGCCCGCGCCCGCGACGAAGCGGCGGAACAGATGGGACCAATCGCAGGAGGACGAGGGGGATGGCGCCGCCGCTACTGGGGCCAAGAAGGCGAAGACTGCCTCCTCCTCCTCCTCCTCACATTGGGACGCCGCCCCTGATGCTGCAACTCCCGGGATCGGGCGCTGGGACGCCACGCCTGGGCGCGCCGGAGGTGCGACGCCCTCCCTGAAGAGGAATCGTTGGGATGAGACCCCGACTCCAGGGAGGATGGCTGATGCGGATGGAACCCCTGCACCGTCCGTGGCGTGGGATTCTTCTTCCACCCCAACGCCCAAGAAGCAGAGATCAAGGTGGGATGAGACGCCTGCGGGTGTGGGGAGCACGGCACCTCGCGCTACCGATGCTGTTACTCCTGCAGGTTATGCTCCTGGGCCAACCCCGTTCGACGCGGCGGACCTCGCCACGCCGTCACCTGGCCAGATTGCTCGTGGCCCGATGACACCGGAGCAGTACCAGCTCTTGCGGTGGGAGCGGGACATCGAGGGGCGTAACATGCCTCTGACTGATGAGGAACTTGACACCATGCTCCCGCAGGTGGGGTACAAGATTCTTGATCCTCCGGCTTCTTATCAGCCCATACGCACACCCGCAAGGAAGCTTCTCGCGACGCCGACACCGCTGTTTACACCGCTCTATGCCATCCCTGAGGAGAACCGTGGGCAGCAGTTTGATGTGCCCAAGGAGTTGCCTGGTGGGTTGCCACAAATGAAGCCGGAGGATTACCAGTACTTTGGAACATTGCTGAACGAGGGAGAGGAAGAGGAGAAGCTGTCACCAGAGGAGCATAAGGAGAGGAAGATCTTGAAACTCCTGTTCAAGGTGAAGAATGGCACACCACAACAGCGGAAAGCGGCGCTTCGACAGCTCACGGACAAGGCGCAGGAATTTGGTGCTGGCCCGCTGTTCAACAAGATCCTGCCGTTGCTCATGCAGCCAACGCTTGAGGACCAGGAGCGTCATCTTCTGGTGAAGGTCATTGATAGAGTGATATACAAGCTGGATGATCTGGTTCGTCCGTTTGTGCATAAGATTCTTGTGGTTGTTGAGCCACTTCTGATTGATGAGGATTACTATGCTCGTGTTGAGGCCCGGCAGATTATCTCAAATCTTAGCAAAGCAGCTGGACTTGCTACTATGATTGCCACCATGAGACCAGATATTGATAACACTGATGAGTATGTGAGGAATACCACTGCTAGGGCATTCAGTGTGGTTGCTTCTGGTTTGGGGATTCCTGCTCTCTTGCCATTCTTGAAGGCTGTCTGCCAGAGTAAAAAGTCTTGGCAGGCTCGGCACACTGGTATTAAGATTGTTCAGCAGATTGCTATTCTCATGGGCTGTGCTGTTCTGCCACACCTCAGGTCCTTAGTTGATATCATTGAGCATGGTCTGAGTGATGAAAACCAGAAAGTACGGACAATCACCGCACTGTCTCTTGCTGCACTTGCTGAGGCTGCCGCACCCTATGGTATAGAAAGTTTTGATACGGTGTTGAGGCCTTTGTGGAAGGGTACCAAATCTCACCGTGGAAAGGTCCTTGCTGCTTTCTTGAAAGCCGTTGGTTTCATCATCCCTCTTATGGATGTTGAATATGCCAGTTACTACACCAGGGGGGTGATTCCAATCCTGATTAGGGAGTTCCAGTCACCAGATGAAGAGATGAAAAAGATTGTCCTGAAGGTTGTTAAACAATGTGTCAGTACAGAGGGTGTAGAGGCTGACTATATCCGTAATGGCATCCTTCCAGAGTTCTTCCGTCACTTTTGGATAAGGAGAATGGCTCTAGATCGTAGGAACTATAAACAACTTGTGGAAACAACAGTGGAGATTGCAAACAAGGTTGGAGTTGCTGACATCGTTGGGAGGATTGTTGAGGATCTCAAAGATGAAAGTGAACCTTACAGGAGAATGGTGATGGAAACAATTGAGAAGGTGGTGGTTCACCTGGGTGCCTCAGATATTGATCGCCATCAGGAGGAGCTTCTTATTGATGGCATCGTGTATACTTTCCAACAGCAGACAAGTGATGATTCAAATGTCATACTTAATGGGTTTGAAACAGTTGCGAATGCACTTGGCCAGAGGGTTAAGCCTTATGTTCCTCAGATTTGTGGTATCATCAAGTGGATGCTGAACACCTCGAGTGCAAAAGCTAGGCAGCGAGCTGCTGATCTGATGTCAAGGATAGCCATTGTGATGAAGCTGTGCCAAGAGGAGCGGCTGATGTGTCACTTGGGTCATATATTATATGAGTCCTTGGGGGAGGAGTATCCTGATGTGCTGGGTTCAATCCTTGGAGCTTTAAAGGCTATCGTGAATGTTGTTGGTATGACAAAGATGACGCCACCAATCAAAGATCTTCTTCCTCGGTTGACCCCAATCTTAAAGAATAGGCATGAAAAGGTCCAAGAGAACTGTATTGATTTAGTTGGTAGGGTTGCTGATCGTGGAGCAGAGTTTGTGCCAGCCAGGGAATGGATGAGGATTTGCTTCGAGCTGCTTGAAATGTTGAAGGCTCACAAGAAGGGTATTAGACGAGCCACTGTGAACACATTTGGCTATATTGCGAAGGCTATTGGGCCAGAGGATGTGTTGGCCACTCTATTGAACAACTTGAAGGTGCAGGAGCGTCAGAACCGAGTTTGCACTACTGTCGCAATCGCCATTGTTGCTGAAACTTGCTCCCCCTTTACAGTTTTGCCTGCCCTTATGAACGAGTACCGAGTACCAGAGCTCAATGTCCGTAATGGTATTTTGAAGTCTCTGTCATTTCTTTTTGAATACATTGGTGAGATGGGTAAAGATTACATATATGCTGTCACGCCATTGCTTGAAGATGCTCTGATGGATAGAGATCTGGTTCATCGGCAGACTGCTGCCTCTGCTGTTAAGCACATGGCACTAGGTGTTGCTGGCTTGGGTTGTGAGGATGCTCTTGTCCACTTACTTAACCTTGTCTGGCCCAACATATTTGAGACATCTCCCCATGTCATAAATGCTGTCATGGAGGCGATTGATGGCATGAGGGTTGCCCTAGGCTCAGCTGTGATTTTGAATTATTGCCTCCAAGGCCTTTTTCATCCAGCAAGGAAAGTGCGTGAAGTATACTGGAAGACCTACAACTCTCTATATATTGGCGCACAAGATGCACTTGTTGCTGCTTATCCTGCGTTGGACATTGATGGGAACAATATCTACAGCCGCCCAGAGTTAGCTATGTTTGGTAATTTGATCCAAGTTCGATGCAGAGTTCTGGATTTAAGAACGACCACAAGGACATTTTCGCCACTGAGAATGGATTAG</cdnaseq>

Protein Sequence

<aaseq>MDDEIARAQEQRRNVEDDALAAVSSVPFDADLYGGVSDPDRFAGYETSIAATAEDDDDDDDATEPVNPAARSLASYSGHAIASSSSGLPRAADEEGDGLRAREGEYHRRHPPAPATKRRNRWDQSQEDEGDGAAATGAKKAKTASSSSSSHWDAAPDAATPGIGRWDATPGRAGGATPSLKRNRWDETPTPGRMADADGTPAPSVAWDSSSTPTPKKQRSRWDETPAGVGSTAPRATDAVTPAGYAPGPTPFDAADLATPSPGQIARGPMTPEQYQLLRWERDIEGRNMPLTDEELDTMLPQVGYKILDPPASYQPIRTPARKLLATPTPLFTPLYAIPEENRGQQFDVPKELPGGLPQMKPEDYQYFGTLLNEGEEEEKLSPEEHKERKILKLLFKVKNGTPQQRKAALRQLTDKAQEFGAGPLFNKILPLLMQPTLEDQERHLLVKVIDRVIYKLDDLVRPFVHKILVVVEPLLIDEDYYARVEARQIISNLSKAAGLATMIATMRPDIDNTDEYVRNTTARAFSVVASGLGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILMGCAVLPHLRSLVDIIEHGLSDENQKVRTITALSLAALAEAAAPYGIESFDTVLRPLWKGTKSHRGKVLAAFLKAVGFIIPLMDVEYASYYTRGVIPILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNGILPEFFRHFWIRRMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVVHLGASDIDRHQEELLIDGIVYTFQQQTSDDSNVILNGFETVANALGQRVKPYVPQICGIIKWMLNTSSAKARQRAADLMSRIAIVMKLCQEERLMCHLGHILYESLGEEYPDVLGSILGALKAIVNVVGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRVADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPEDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVRNGILKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNLVWPNIFETSPHVINAVMEAIDGMRVALGSAVILNYCLQGLFHPARKVREVYWKTYNSLYIGAQDALVAAYPALDIDGNNIYSRPELAMFGNLIQVRCRVLDLRTTTRTFSPLRMD</aaseq>

Gene Sequence

<dnaseqindica>1..333#429..3689#4284..4364#ATGGACGACGAGATCGCGCGCGCGCAGGAGCAGCGCCGCAATGTGGAGGACGATGCCCTCGCGGCCGTATCCTCCGTGCCCTTCGACGCCGACCTCTACGGCGGCGTCTCCGACCCCGACCGCTTCGCCGGCTACGAGACCTCCATCGCGGCCACCGCCGAGGACGACGACGACGACGACGACGCGACCGAGCCGGTCAACCCCGCCGCCCGCAGCCTTGCCTCCTACTCGGGCCACGCCATCGCCTCCTCCTCCTCGGGCCTCCCCCGCGCGGCGGATGAGGAGGGTGACGGGCTCCGCGCCCGCGAGGGCGAGTACCACCGCCGGCACCCGGTCCGCGGCATGTCGCCGGATCGCCACGACCCTTTTGCTGCCGCGGAGACCACTCCGGACCCATCCACGCGGACCTATGCCGACGCGACAACCAGCCCGCGCCCGCGACGAAGCGGCGGAACAGATGGGACCAATCGCAGGAGGACGAGGGGGATGGCGCCGCCGCTACTGGGGCCAAGAAGGCGAAGACTGCCTCCTCCTCCTCCTCCTCACATTGGGACGCCGCCCCTGATGCTGCAACTCCCGGGATCGGGCGCTGGGACGCCACGCCTGGGCGCGCCGGAGGTGCGACGCCCTCCCTGAAGAGGAATCGTTGGGATGAGACCCCGACTCCAGGGAGGATGGCTGATGCGGATGGAACCCCTGCACCGTCCGTGGCGTGGGATTCTTCTTCCACCCCAACGCCCAAGAAGCAGAGATCAAGGTGGGATGAGACGCCTGCGGGTGTGGGGAGCACGGCACCTCGCGCTACCGATGCTGTTACTCCTGCAGGTTATGCTCCTGGGCCAACCCCGTTCGACGCGGCGGACCTCGCCACGCCGTCACCTGGCCAGATTGCTCGTGGCCCGATGACACCGGAGCAGTACCAGCTCTTGCGGTGGGAGCGGGACATCGAGGGGCGTAACATGCCTCTGACTGATGAGGAACTTGACACCATGCTCCCGCAGGTGGGGTACAAGATTCTTGATCCTCCGGCTTCTTATCAGCCCATACGCACACCCGCAAGGAAGCTTCTCGCGACGCCGACACCGCTGTTTACACCGCTCTATGCCATCCCTGAGGAGAACCGTGGGCAGCAGTTTGATGTGCCCAAGGAGTTGCCTGGTGGGTTGCCACAAATGAAGCCGGAGGATTACCAGTACTTTGGAACATTGCTGAACGAGGGAGAGGAAGAGGAGAAGCTGTCACCAGAGGAGCATAAGGAGAGGAAGATCTTGAAACTCCTGTTCAAGGTGAAGAATGGCACACCACAACAGCGGAAAGCGGCGCTTCGACAGCTCACGGACAAGGCGCAGGAATTTGGTGCTGGCCCGCTGTTCAACAAGATCCTGCCGTTGCTCATGCAGCCAACGCTTGAGGACCAGGAGCGTCATCTTCTGGTGAAGGTCATTGATAGAGTGATATACAAGCTGGATGATCTGGTTCGTCCGTTTGTGCATAAGATTCTTGTGGTTGTTGAGCCACTTCTGATTGATGAGGATTACTATGCTCGTGTTGAGGCCCGGCAGATTATCTCAAATCTTAGCAAAGCAGCTGGACTTGCTACTATGATTGCCACCATGAGACCAGATATTGATAACACTGATGAGTATGTGAGGAATACCACTGCTAGGGCATTCAGTGTGGTTGCTTCTGGTTTGGGGATTCCTGCTCTCTTGCCATTCTTGAAGGCTGTCTGCCAGAGTAAAAAGTCTTGGCAGGCTCGGCACACTGGTATTAAGATTGTTCAGCAGATTGCTATTCTCATGGGCTGTGCTGTTCTGCCACACCTCAGGTCCTTAGTTGATATCATTGAGCATGGTCTGAGTGATGAAAACCAGAAAGTACGGACAATCACCGCACTGTCTCTTGCTGCACTTGCTGAGGCTGCCGCACCCTATGGTATAGAAAGTTTTGATACGGTGTTGAGGCCTTTGTGGAAGGGTACCAAATCTCACCGTGGAAAGGTCCTTGCTGCTTTCTTGAAAGCCGTTGGTTTCATCATCCCTCTTATGGATGTTGAATATGCCAGTTACTACACCAGGGGGGTGATTCCAATCCTGATTAGGGAGTTCCAGTCACCAGATGAAGAGATGAAAAAGATTGTCCTGAAGGTTGTTAAACAATGTGTCAGTACAGAGGGTGTAGAGGCTGACTATATCCGTAATGGCATCCTTCCAGAGTTCTTCCGTCACTTTTGGATAAGGAGAATGGCTCTAGATCGTAGGAACTATAAACAACTTGTGGAAACAACAGTGGAGATTGCAAACAAGGTTGGAGTTGCTGACATCGTTGGGAGGATTGTTGAGGATCTCAAAGATGAAAGTGAACCTTACAGGAGAATGGTGATGGAAACAATTGAGAAGGTGGTGGTTCACCTGGGTGCCTCAGATATTGATCGCCATCAGGAGGAGCTTCTTATTGATGGCATCGTGTATACTTTCCAACAGCAGACAAGTGATGATTCAAATGTCATACTTAATGGGTTTGAAACAGTTGCGAATGCACTTGGCCAGAGGGTTAAGCCTTATGTTCCTCAGATTTGTGGTATCATCAAGTGGATGCTGAACACCTCGAGTGCAAAAGCTAGGCAGCGAGCTGCTGATCTGATGTCAAGGATAGCCATTGTGATGAAGCTGTGCCAAGAGGAGCGGCTGATGTGTCACTTGGGTCATATATTATATGAGTCCTTGGGGGAGGAGTATCCTGATGTGCTGGGTTCAATCCTTGGAGCTTTAAAGGCTATCGTGAATGTTGTTGGTATGACAAAGATGACGCCACCAATCAAAGATCTTCTTCCTCGGTTGACCCCAATCTTAAAGAATAGGCATGAAAAGGTCCAAGAGAACTGTATTGATTTAGTTGGTAGGGTTGCTGATCGTGGAGCAGAGTTTGTGCCAGCCAGGGAATGGATGAGGATTTGCTTCGAGCTGCTTGAAATGTTGAAGGCTCACAAGAAGGGTATTAGACGAGCCACTGTGAACACATTTGGCTATATTGCGAAGGCTATTGGGCCAGAGGATGTGTTGGCCACTCTATTGAACAACTTGAAGGTGCAGGAGCGTCAGAACCGAGTTTGCACTACTGTCGCAATCGCCATTGTTGCTGAAACTTGCTCCCCCTTTACAGTTTTGCCTGCCCTTATGAACGAGTACCGAGTACCAGAGCTCAATGTCCGTAATGGTATTTTGAAGTCTCTGTCATTTCTTTTTGAATACATTGGTGAGATGGGTAAAGATTACATATATGCTGTCACGCCATTGCTTGAAGATGCTCTGATGGATAGAGATCTGGTTCATCGGCAGACTGCTGCCTCTGCTGTTAAGCACATGGCACTAGGTGTTGCTGGCTTGGGTTGTGAGGATGCTCTTGTCCACTTACTTAACCTTGTCTGGCCCAACATATTTGAGACATCTCCCCATGTCATAAATGCTGTCATGGAGGCGATTGATGGCATGAGGGTTGCCCTAGGCTCAGCTGTGATTTTGAATTATTGCCTCCAAGGCCTTTTTCATCCAGCAAGGAAAGTGCGTGAAGTATACTGGAAGACCTACAACTCTCTATATATTGGCGCACAAGATGCACTTGTTGCTGCTTATCCTGCGTTGGACATTGATGGGAACAATATCTACAGCCGCCCAGAGTTAGCTATGTTTGTGTGATCAATGTGAGTATTGCTTATTTTACCCATCAACTTACTTTATGCGTTAATCATCGGAAAATATGCTGCTAGGTTATGAAATAAGTTAATATTCATGTATCTTATAGTTCATATTTACTTGTTTGCGCTCTTTCACTGATATGCAACTGTTGATCTATGTCCTTCGTTGTGCTATTAGAATGAAATGGCTTTGTGTTTCCCTTGATTTAGTGTTCTCCAACAATGCCTGCGTCATCTTTCTGGCTAATGGCTATGCTGTTTGGCCATAAGGAAGTTATTGACATGATGAATTGATGCGTTAGTTTTTTTCTCTCCACAAAAGAAAGGATCTGATGTGCTGGCATTGGCAGGAAGCATGTATGTGCATATCATCAGTTATCACACATGTCGCTTGAACTGGGATGGTATCTTCATTAGAGCTTACATTTAAAATTATGTTATTTGGTGTTCTTGTAACATGTCTTTATTGAAGTCATTTTTTTTGTTTGCAGGCTTGTTCCTTTTTGAAGGGGGTGCAATCTTTAAGAAATATCTATAAACTTCCTCTTTGATCTGATTGACTAATCTTTTTGGAATGTTTGTTTTTCAGGGTAATTTGATCCAAGTTCGATGCAGAGTTCTGGATTTAAGAACGACCACAAGGACATTTTCGCCACTGAGAATGGATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008208