Os07g0171100

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Gene Name

Os07g0171100

Description

Tetratricopeptide-like helical domain containing protein

Version

NM_001065529.1 GI:115470790 GeneID:4342513

Length

2002 bp

Definition

Oryza sativa Japonica Group Os07g0171100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3792117..3794118

Sequence Coding Region

3792255..3792267,3792616..3792661,3792745..3792851,3792949..3793043,3793169..3793245
,3793334..3793454,3793533..3793592,3793672..3793812

Expression

GEO Profiles:Os07g0171100

Genome Context

<gbrowseImage1> name=NC_008400:3792117..3794118 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:3792117..3794118 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctcgcccaccagaccggcaagttcgaagtcggcgacaaggtcctcgccaccagtgctgtatttggggaggaaatctggccggcagcagggtacggacagaccatgtactgcatccgtcagagggttggccccctctacatgaagatggagaagagatttgggaaatgggatggtgctgctgagctcagtgagaaggagatcatcagggctgagaggaactccggggtgatcagcaacagggtgagggagatccagctgcaaaattaccagaggaagatggagcagaagatgcagagagaggaggatcttcgcatggggctgaggctgtacaaggatggtaaatatgaggaggcattggagaagttcgagtcagttttgggatcaaaacctgagatcaatgagtcttccatagctagctacaatgttgcctgctgttactcgaagcttgaccggatacaagctggtatttctgcactggaagatgccctgaaagcaggttatgaagacttcaagagaattcgcaccgacccggatctagaaaacttgaggaaaactgaggaattcaacgtcctgctgaacaagtacgacgaatcgttcatcaatgagaatgctatcaacgccatcaaatccttgtttggattcaacaagaaatga</cdnaseq>

Protein Sequence

<aaseq>MALAHQTGKFEVGDKVLATSAVFGEEIWPAAGYGQTMYCIRQRV GPLYMKMEKRFGKWDGAAELSEKEIIRAERNSGVISNRVREIQLQNYQRKMEQKMQRE EDLRMGLRLYKDGKYEEALEKFESVLGSKPEINESSIASYNVACCYSKLDRIQAGISA LEDALKAGYEDFKRIRTDPDLENLRKTEEFNVLLNKYDESFINENAINAIKSLFGFNK K</aaseq>

Gene Sequence

<dnaseqindica>139..151#500..545#629..735#833..927#1053..1129#1218..1338#1417..1476#1556..1696#acacaagcgtctcctcctcctcctcctccgcctcatctccaccaccaccgcgagctcgccagcgccacgattcccgaggcccaggagagcgcgagccgccgccgccgcagcagcagcctagctcctagctagccagccatggcgctcgcccaccagctggtcgccaaccggccgctcctccccaccccggcgccgcgcgtccccagggccagcatcagcaacgcgcggccgcagccacttcttggccgggactgccgcctgacgctgctgcgggcggagaggaggacgctcgccgtcgcccgggcgtcgtcgtcgtcgtcgtcgtcgtcgtcgcagacggagcccaagtcggagggcggcgaggcggcggcggcggagggggaggagcagccgtacgaggagtacgaggtggagatcctgaagccgtacgggctcaagttcgccaagggccgcgacggcggcacctacatcgaggccatcctccccggcgccgccgccgaccagaccggcaagttcgaagtcggcgacaaggtcctcgccaccaggtcagtccaccgattcttgcacacaattcacacacttcagaaacatcgatttgatcaagaacacaaattcgcccaattcgcagtgctgtatttggggaggaaatctggccggcagcagggtacggacagaccatgtactgcatccgtcagagggttggccccctctacatgaagatggagaagagatttggtaatttctatccacatttggtgatgattcattcttttcaagaactgtaaaatttgaggttggattcagtctctgaatgttttctaactgaatttagggaaatgggatggtgctgctgagctcagtgagaaggagatcatcagggctgagaggaactccggggtgatcagcaacagggtgagggagatccaggtgagtttacacgcatcaagaaacatagattctgtctcttttgatcttttcactcataggaattcgcagattgttcagtttgtgtagctgatcatgtcatgccaatgtcttggaaatgtgtgcagctgcaaaattaccagaggaagatggagcagaagatgcagagagaggaggatcttcgcatggggctgaggctgtacaagtcagtgaaatagttcttcgaattctgcattgagattgctttagttctgaactctgttgactgacttgttctgaaaaattgacttcagggatggtaaatatgaggaggcattggagaagttcgagtcagttttgggatcaaaacctgagatcaatgagtcttccatagctagctacaatgttgcctgctgttactcgaagcttgaccgggttcgatatttctctcaatatgaaaagcaaatctgccactgaatgtccatgaactcatgtggatgtttctttctgcagatacaagctggtatttctgcactggaagatgccctgaaagcaggttatgaagacttcaaggtaaccagacaacaactcttttgcagtacagataagcattcttcatgactagtgacacattttgcttgatttcatgaagagaattcgcaccgacccggatctagaaaacttgaggaaaactgaggaattcaacgtcctgctgaacaagtacgacgaatcgttcatcaatgagaatgctatcaacgccatcaaatccttgtttggattcaacaagaaatgagcactgaactggtcatggtggtaggagatattgcatcttttctccagctgcagttgaacacttctgaagctttgctaggctatatagcacttggcaaacacggttcaatttttctccctgccattagttcacacttcacacaccagtagttttagctattcttggtgagattctgcagaacggtttcagtcttccctcttactgtaaccagtcgatggagatacactttgtaaattcaagcaaccaaatgttaaggaaatatattgtgattgtgcttataaatttatcccaaatagtatgttacgc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0171100, RefSeq:Os07g0171100