Os07g0173700

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Revision as of 08:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0173700| Description = Similar to 40S ribosomal protein S18| Version = NM_001065542.2 GI:297606795 GeneID:4342526| Length = 2906 bp| Defin...")
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Gene Name

Os07g0173700

Description

Similar to 40S ribosomal protein S18

Version

NM_001065542.2 GI:297606795 GeneID:4342526

Length

2906 bp

Definition

Oryza sativa Japonica Group Os07g0173700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3904286..3907191

Sequence Coding Region

3904388..3904390,3904485..3904645,3905714..3905902,3906872..3906977

Expression

GEO Profiles:Os07g0173700

Genome Context

<gbrowseImage1> name=NC_008400:3904286..3907191 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:3904286..3907191 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgctgatcgcgggggaggatttccagcacatcctgcgtctgctgaacacgaacgtggatgggaagcagaagatcatgttcgcgctcacctccatcaagggtgtcggccgccgcttctccaacatcgcctgcaagaaggccgacatcgacatgaacaagcgggctggtgaactcactcctgaggagcttgagcgcctcatgactgtggtggcaaaccctcgccagttcaaggtccctgactggtttctgaacaggaagaaggactacaaggatgggaggttctcccaggttgtttctaacgccctggacatgaagctcagggatgaccttgagaggctgaagaagatcaggaaccaccgtggtctccgtcactactggggtctccgtgtccgcggtcagcacaccaagactactggcaggaggggaaagactgtcggtgtctccaagaagagataa</cdnaseq>

Protein Sequence

<aaseq>MSLIAGEDFQHILRLLNTNVDGKQKIMFALTSIKGVGRRFSNIA CKKADIDMNKRAGELTPEELERLMTVVANPRQFKVPDWFLNRKKDYKDGRFSQVVSNA LDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR</aaseq>

Gene Sequence

<dnaseqindica>103..105#200..360#1429..1617#2587..2692#ggaaaaccctaaccctcgcagccgcatcgcgccaccgcctcctcctccccctccccctccggcgagagagcccgcgccgttgccgccgccgccgccgccgccatggtaagctccgttcctctcccgcatctcccctttgcagtggtctctttgcgcaggtgctaaggggaggaatcgcgtgtgtgtttgatttttgcagtcgctgatcgcgggggaggatttccagcacatcctgcgtctgctgaacacgaacgtggatgggaagcagaagatcatgttcgcgctcacctccatcaagggtgtcggccgccgcttctccaacatcgcctgcaagaaggccgacatcgacatgaacaagcggtgagcaaaaccttctcgcctcacgcccccccttccctgatctgggtgctagtttgtgctgttgatgatgtgctggaatggtgcgtggcgttggatcgtttggtgtgtgtaggtataacgaatggttattagtgttatcgggctaatttctagataatttgagcatctttgggtttgtagctttgtaactgtgcattttgaatccgaagttttgtggtttcgttggttctactgtgatgttaggtggatggatcatgcactagagttattttgttcgatagtgactgggattcagagtagggtttactggctggtgctttaatttctttgtcgtggattgtgtgatctgttacatactcttacatggcaatttttttgtgcataaggctgccgcaaagctgattattaactgtctgccaactaagttagattgcttggaacttttagaatttattttaacagcacaaccgttgtaattgtaagttatggatttattttttgctaacttgacaggggattcaaatgcctgctaattttgatgtgtttatatatcaattggcgatgatgttgattgcatggctgatcttttggctccagttaattgcctaatactgtgtttattctgacgtgatgtcacaaggtgtcagtttgttgcaactagtttcagttaagttgaatttgtgttctatttggcttaataggtcaggagttgtctgttactacttagcagttcacaattatgttgaatggtagggcatttgattagtttatattttctgggacgtcattaattttgggctactaagatgattagtctatttttatgctcgtttggaacctgagggtttaattagataaaaacgtgttatagttatcacatctatattttatttggtattagttgtttcatgctgcttggttaatctgacatgccatactgtactttgcttatgctaagttaatctgatatgactttgtaaccaaaacataagatggtgatgattttgtgcaaaaccaaaggacttttatgttactagtgagaaagctaacaattatttttctctgtagggctggtgaactcactcctgaggagcttgagcgcctcatgactgtggtggcaaaccctcgccagttcaaggtccctgactggtttctgaacaggaagaaggactacaaggatgggaggttctcccaggttgtttctaacgccctggacatgaagctcagggatgaccttgagaggctgaagaagatcaggtttggttctgcttaatttgtgctcgcttaccacattttttaggcttgttgtaacttgcatctgtaaggtgctgtacatatactccctccgtccaaaaaaaaagggcaacctaggatgggatgtgacccctctggaggtaggttgtctttttttgtgacggagggagtacctttcatgcttttgttgcattgatagaaattttacctaaatttgttctgttttaatgagatgtttgcggcatcaacaactggtcatgggatagaaattttagctaaatttgttctgttttaatgagatgtttacggcatcaacaactggtcatgggaatctgggaatgattcattgctggttacaccaataattccattttttatctgatgaaattctagctaaatacgaacttttcatgtctttagtcattcccacagtttaaataattcattgtattatgatgaagctagtggagtgaactccatttaaatcatattcgttttggtttcgaggctttggactgctaacttctttgatctaattaattgcattctcacagttgaacaaattgtgctttgatttcgtttgtactacgattaaggccctgtttctttcagcttgggattattataatctagattattgagtcagattactataaactagattgttataatctgtagtagaataagcggttagttgtttctttcctagattattagagcctagattattggatttgcaagtctaaagagggagtgggtggcatggtggataatttttcacccaataatctagaaaaagctcacctaaatgagcttatcagattataataagctgagcttcaaattattataagctacttcaataagttgtctgtttctttcagcttactcccaataatctagattataataatcccaagctgaaagaaacatggcctaagttgaatcgaactactccattttgtaatgcaggaaccaccgtggtctccgtcactactggggtctccgtgtccgcggtcagcacaccaagactactggcaggaggggaaagactgtcggtgtctccaagaagagataaattccatgcccatcggctcagcaaattcattttgcttgtcttatgagcgtttcaatgatgtcagtcttgataggcagttttgttggatgatgcttttgtctaagaagatagatcgtgcgttgcaggaatctcaaaacttttatatattgtaacttggttgtttggtaccgcaaattctgaagcctaatttttttactggatgtgtttctggtgg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0173700, RefSeq:Os07g0173700