BGIOSGA008374

From RiceWiki
Revision as of 18:51, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA008374

Description

2-cys peroxiredoxin bas1

Definition

Oryza sativa Indica Group BGIOSGA008374, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA008374-TA

Ensembl Protein ID

BGIOSGA008374-PA

Length

3377

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21551493..21554869

Sequence Coding Region

21551493..21551690,21551778..21551852,21551987..21552068,21552172..21552251,21553628..21553753
,21553875..21553988,21554753..21554869

Genome Context

<gbrowseImage1> name=IndicaChromosome02:21551493..21554869 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:21551493..21554869 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCTGCTGCTCCTCCCTCGCCACCGCCGTCTCCTCCTCCTCCGCCAAGCCCCTCGCCGGCATCCCGCCTGCCTCGCCGCACTCCCTCTCCCTCCCTCGCTCCCCCGCCGCCGCCGCCAGGCCCCTCCGCCTCTCCGCCTCCTCCTCCAGATCCGCCCGGGCCAGCAGCTTCGTCGCCCGCGCCGGCGGTGTGGACGATGCGCCGCTGGTCGGGAACAAGGCGCCCGACTTCGATGCGGAGGCAGTCTTCGACCAGGAGTTCATCAACGTGAAGCTGTCCGACTACATCGGGAAGAAGTACGTCATTCTCTTCTTCTACCCGTTGGACTTCACCTTCGTCTGCCCGACCGAGATTACCGCTTTCAGTGACAGATACGATGAGTTCGAGAAGTTGAACACTGAGATCCTCGGTGTTTCAATTGACAGTGTGTTCTCCCATCTTGCATGGGTGCAGACAGACAGGAAATCTGGTGGGCTTGGTGATCTGAAATACCCATTGATTTCAGATGTTACTAAATCAATTTCGAAGTCCTTTGGTGTCTTGATCCCTGACCAGGGAATTGCTCTGAGAGGACTTTTCATCATTGACAAGGAGGGAGTGATTCAGCACTCTACCATTAACAACCTTGCCATTGGACGCAGTGTAGATGAGACCATGAGGACCCTTCAGGCGTTGCAGTACGTCCAGGACAACCCGGACGAGGTGTGCCCGGCCGGATGGAAGCCCGGTGACAAGTCGATGAAGCCTGACCCCAAGGGAAGCAAGGAGTACTTCGCGGCCATCTAA</cdnaseq>

Protein Sequence

<aaseq>MAACCSSLATAVSSSSAKPLAGIPPASPHSLSLPRSPAAAARPLRLSASSSRSARASSFVARAGGVDDAPLVGNKAPDFDAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYDEFEKLNTEILGVSIDSVFSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSFGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETMRTLQALQYVQDNPDEVCPAGWKPGDKSMKPDPKGSKEYFAAI</aaseq>

Gene Sequence

<dnaseqindica>1..198#286..360#495..576#680..759#2136..2261#2383..2496#3261..3377#ATGGCCGCCTGCTGCTCCTCCCTCGCCACCGCCGTCTCCTCCTCCTCCGCCAAGCCCCTCGCCGGCATCCCGCCTGCCTCGCCGCACTCCCTCTCCCTCCCTCGCTCCCCCGCCGCCGCCGCCAGGCCCCTCCGCCTCTCCGCCTCCTCCTCCAGATCCGCCCGGGCCAGCAGCTTCGTCGCCCGCGCCGGCGGTGTGGTGAGCCCCGTCAATCTTGACCTGTATTTGATTGCTCTCCGTTGATTCGGTTCTCCTGCTTGCTTACTTCTGCTCTTGCCGTGTTAGGACGATGCGCCGCTGGTCGGGAACAAGGCGCCCGACTTCGATGCGGAGGCAGTCTTCGACCAGGAGTTCATCAACGTATGCGTCTCATCGGCTCATATCTCACTTCTCAGATACAGGAAATTTCCTGGTAGCTGGTGGTTGTGTATGCTCCGAGGTCTGATTATTGCTCCTGTGGTTGGCTGGTTGCCACCGTCCCTATGTGATTGCAGGTGAAGCTGTCCGACTACATCGGGAAGAAGTACGTCATTCTCTTCTTCTACCCGTTGGACTTCACCTTCGTCTGCCCGACCGGTGAGCACGCAATGTTCGCGTTAAGGGCCCCAATCGATGCTCATCTTGAGTGCCAGTGAAGTTTGCTCTGGTGCACCGATTAATGCATTCCTGATGTTTGCAGAGATTACCGCTTTCAGTGACAGATACGATGAGTTCGAGAAGTTGAACACTGAGATCCTCGGTGTTTCAATTGACAGTGTGGTATGTTGTAGCGCCCTCATACTCCGTGCTTTCATCAATACTACCCAATGCCCCGTGCACTGCGATTGAGCTCAAATCAATTTTAAACTTGAATAGTTTTATGTAATTCCTAGTGGAAACCATATATAATTTGCAAAAGAAAAAAAATATCAATCCACACACATAACATTATTAAAAGCCACTTACGCAAATATCTACTTGTTGTTTAAAAGGTCCCACCAACTCAAGAGGTGATGGTAGCAAAATAACCATGCATTGCAATGGATTTGAAAATAAAAAGAATTATCATAAGTTCTAAACTTGAAAATTAAATATTTATCTTGAGTAAAACATATATAATTTGCAATCAAACATCAATCCACCAAAAGCCAAGCCACATTCACAAAACTTTTGAAGATCCTGCCAACTCAAGATGTGGTTCTATGTGGAGTTCTTTTAGTTTTGGCATAGACTTGGCCATGCAAGTTTGATTAAGCTAGTACGTAATAGTTCATAACATAAATTAGTGTCTCCCTCTCTCTATAGATAGATATATGTGGTTAGATCAATCGGTTGTATATAATATTCTGCAAATTCACATGCTATGTCACCTTTGGAGCATAACTACTGTCCTTATGTGTGCAATTTTAGCACTTCCAAGTTCTAAAAGAAATCTTTGGAAGCTTTGCATATTTGGATACTGTTTTTTTCCAGGAGAAATGGTTTACAGAACATAGTTGTGGGCTCAGTGTAGTCGCATGTAATTCTTTAGCTAAATTCACCATTTTCTGAAGATCTTTTTCTAACTATTCTCGTATTGGGAGTGATGGTGTGACTAAAAATACGTGGACGATGGGATAGGGTCACACATGCTTTGTTTCCCATTAAAATGCATGCCTGGTTAATGTATTGATTAACCGTAAAATCAATTTTATAGCAGAAGTTTGTCTCTAAGATCTTTCCTTTTGTATCTTATTATGACGCCTTAAGTGTTATCATACTTATTTATTCTAGATCACATGGTTGTCGTGTTGTATGACCTACTTTGTTAGTGGAGCAGAGCGTTTACGTCTTACTTTATTGCTTTGTACAGTTATGATATGTTAATCCCTTTGATACAAAAGACGTTCCACTTTTGTTCCATATTCATCACAATACAATTAGGGGGGCATATTTATCATAAAAGGCATCTTTTAAATCTCATGCTAATACACTATAGTAAATATTATGGTCAAAGTGACACCTTGAAAACTACGGTAAGTAAGAATGATTCCCCTCTTTCTGAATCAGAGGGAGTATTTGATTTATTTTCTGTAGTTCCATTATAGCAATAACCTTAGTGGTATTTTTCCATCATTTTTGGTGATCTGACATGTGAAATAATTCTTTGGTTGTAGTTCTCCCATCTTGCATGGGTGCAGACAGACAGGAAATCTGGTGGGCTTGGTGATCTGAAATACCCATTGATTTCAGATGTTACTAAATCAATTTCGAAGTCCTTTGGTGTCTTGATCCCTGACCAGGTATCCATATTCCATCCAACCATAGCATTCTTGCTTTAGATTCTTTGCTATCAACTGGTGCACTTTTCAGGATCTGTTAGCTGCTTGTTATGTTTTCTAAATCTGAACGTTTATCTGTCAGGGAATTGCTCTGAGAGGACTTTTCATCATTGACAAGGAGGGAGTGATTCAGCACTCTACCATTAACAACCTTGCCATTGGACGCAGTGTAGATGAGACCATGAGGACCCTTCAGGTATGGCATTACATCAAATTGCTGCTTTTTGAGTAGGGCCTCTCTGTGGGTCTATGGCCTCTAGGAAATAAAATAATAAATGACTAGTTGCTAATTTTGGAATTTTAGCCCAGAAAGAGAGCACATTTGTTGAGCACCCGTAGTGCGTGATAAACACGTCATTTTGCAAAGATGGTTATCTTGAAGCACAACTCATGCACCATAAAATGGTTCTGGTGCGTTTTGATGTAGAGCAAAGTAGTGCTCTGTTTTTTTAGAAACGTTATATGCACTTCGTTAGATTATGCAACCACCTTTCAACCAGTGAACTGAATGCCTTTCTTTGTACTTCTATTTGCTAAGATGAACGTCTACATTGTTCTACATGTAGGCATCGAGTCTAGAGTATACATTACTTTCTGCACATACTGTAAGAGTACTGTAGACCCATCAAGGACCACAATATTTACCTGAAGAAAAAAACAAGGGCCCAGAAAAGTGCATCTACGAGCTTCTTAGGCTGATCCTAGGCATAGCTCAACATGAAGTTATCAGGCTGGCTTAATCGGGCCAAGCTGTCAGGGCGACCTTGTGCTTTTTTGTGGGGGGGGGGGGGGGGGGGGGGGGGTGGAAGTTGCGGTGGGCCAATCCTGGTCCATCCTGCATATAGGGGGGACTAGTTCATGTGTGTTTTCCAGTATGGGTTTCTTCAGTTAACCCGGTGGTTCACTGATCACAACTGTTAGCTGACATGACCACACATTTGCTGTGCTTCTACTCTGCAGGCGTTGCAGTACGTCCAGGACAACCCGGACGAGGTGTGCCCGGCCGGATGGAAGCCCGGTGACAAGTCGATGAAGCCTGACCCCAAGGGAAGCAAGGAGTACTTCGCGGCCATCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008374