BGIOSGA008423

From RiceWiki
Revision as of 18:51, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA008423

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008423, complete gene.

LocusTag

OJ1008_F08.3

Ensembl Transcript ID

BGIOSGA008423-TA

Ensembl Protein ID

BGIOSGA008423-PA

Length

5384

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22617561..22622944

Sequence Coding Region

22617561..22617939,22619464..22619501,22619638..22619666,22620088..22620133,22620257..22620371
,22620480..22620547,22620981..22621664,22621870..22621971,22622579..22622944

Genome Context

<gbrowseImage1> name=IndicaChromosome02:22617561..22622944 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:22617561..22622944 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGAGAGGCGCCATCGTCGACTCTCCTCTCCTCAGGCCCAATGTTGGTGCAGCGCTCGGGCAAGGTGCTGCCATGCCCGCCGTTCACCTCGACTTTGGGAGACTGCAACAGCCGCCTTCCGGCTTTCGCCTCCACAACGTCAGGAATCTGCCGTTGCAGTTCACCTCAACTCACCTCGAAGGCTCTCGAATCCGGAGAGGACGCCGCCGCTTTCTGCCTTCACGCCGGGAGGTCGCAGCCGCTATCCACGTTCTGGTTGAGTCATGCTGGAACAATAACCCACTCGTGCCGGCTTGTGTTGCGTCATCTGTCCGCTCCTCTTGGTTCCTAACAGCAAGTCCAGGCATCGCCTCACTCCAGGTGGCTGGCCGAGCAATGTCTGAATTTTTGACAGGCAGTTTTCAGGGTGAGCAGGCCCTGCTGAAAGAAGAATCTACTGAAAGGGTATGCATTGACAACAGCACCTGCAGCGACTTCACCTTAGTGAAGGTCGACAGCATGAACAAGAATGGCATCCTGTTGGAGGTGGTGCAAGTTCTGAGCGATCTCGATCTCGCCATCTCGAAGGCGTACATCACCTCTGATGGTGGATGGTTCATGGATGTGTTTCATGTGGTGGACAAGCAAGGGCAGAAGGTGACTGATGAGAAGACCATTAAGCACATTGAGAAGGCGTTAGGCCCAGACAGCAACCTGCTGGGTGGCGCGAAGGGCGGGTCGTCGCCGGTGAGGTCGGTGGGGATGCACTCCATCGGCGACCACACCGCCATCGAGCTCAAGGGGCCCGACCGGACGGGCCTCCTCTCCGAGGTCTTCGCCGTGCTCGCCGAGCTCGGCTGCAACGTGCTCGCCGCCGAGGTGTGGACGCACCGCGCCCGCGTCGCCTGCGTCGTGTACGTGAACGACGTCGCGTCGGGGCAGGCCGTCGGCGACCCGTGCCGCCTGTCCCGGATCGAGCACCGCCTCCGCCTCGTCCTCCGCGGCCACGCCGGCGGCGACGACGGCGACGGCGACGACGGCCCGGCGCATGCCAACTTCTTCTCCTCCGGCGGCGCCGGGTCGAACACCCACGTCGACCGGCGGCTCCACCAGTTGATGCACGCCGACGTGGACGCCGACGACGACGACGGCCTCGACAGCCGCGCCATCGTGTCGGGCGAGGCCGGGAACGCGGCGGCGGCGGAGGAGAGGCCGGTGGTGACGGTGGAGCACTGCGAGGAGAAGGACTACTCGGTGGTGAACGTCAAGTGCAGGGACAGGTCCAAGCTGCTGTTCGACATCGTGTGCACGCTCACCGACATGCACTACGTCGTCTCCCACGCCTCCGTCTCCTCCGACGGCATCTACGGCATCCAGGAGCTGTACATTCGTCGGAAGGATGGGCGCACGCTACAGAAGGACGAAGCAGGGAGGGTGATCAAGTGCCTTGAAGCGGCCATCTCCAGAAGAGTATCTGAGGGATTCACCCTGGAGCTGTGCGGCAGGGACAGGGTCGGGCTGCTGTCCGACGTGACGCGGGTGCTCAGGGAGCACGGCCTGACGGTGACGAGGGCCGACGTCACGACGGTCGGCGGCCAGGCCATCAACGTCTTCTACGTCCGCGACGCCTCCGGCGAGCCGGTGGACATGAAGACCATCGAGGGCCTCCGCGTCCAGGTCGGCCACACCGTCATGCTCAACGTCAAGAAGGTGCCCTCCTCCCCCTCCTCCTCCTCCTCCGCCGCCGCCGCCAACGGCAAGTCGCCGGGGCAGCCTGCCTCCGGCGCCCTGTCCAGGACCAGCTTCTTCTCCTTCGGCAACCTCTTCGCCAAGCTCAGAGCATGA</cdnaseq>

Protein Sequence

<aaseq>MRRGAIVDSPLLRPNVGAALGQGAAMPAVHLDFGRLQQPPSGFRLHNVRNLPLQFTSTHLEGSRIRRGRRRFLPSRREVAAAIHVLVESCWNNNPLVPACVASSVRSSWFLTASPGIASLQVAGRAMSEFLTGSFQGEQALLKEESTERVCIDNSTCSDFTLVKVDSMNKNGILLEVVQVLSDLDLAISKAYITSDGGWFMDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIGDHTAIELKGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDPCRLSRIEHRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLMHADVDADDDDGLDSRAIVSGEAGNAAAAEERPVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYVVSHASVSSDGIYGIQELYIRRKDGRTLQKDEAGRVIKCLEAAISRRVSEGFTLELCGRDRVGLLSDVTRVLREHGLTVTRADVTTVGGQAINVFYVRDASGEPVDMKTIEGLRVQVGHTVMLNVKKVPSSPSSSSSAAAANGKSPGQPASGALSRTSFFSFGNLFAKLRA</aaseq>

Gene Sequence

<dnaseqindica>1..379#1904..1941#2078..2106#2528..2573#2697..2811#2920..2987#3421..4104#4310..4411#5019..5384#ATGCGGAGAGGCGCCATCGTCGACTCTCCTCTCCTCAGGCCCAATGTTGGTGCAGCGCTCGGGCAAGGTGCTGCCATGCCCGCCGTTCACCTCGACTTTGGGAGACTGCAACAGCCGCCTTCCGGCTTTCGCCTCCACAACGTCAGGAATCTGCCGTTGCAGTTCACCTCAACTCACCTCGAAGGCTCTCGAATCCGGAGAGGACGCCGCCGCTTTCTGCCTTCACGCCGGGAGGTCGCAGCCGCTATCCACGTTCTGGTTGAGTCATGCTGGAACAATAACCCACTCGTGCCGGCTTGTGTTGCGTCATCTGTCCGCTCCTCTTGGTTCCTAACAGCAAGTCCAGGCATCGCCTCACTCCAGGTGGCTGGCCGAGCAAGTATGCTCAGTTCATAGATCTTGGTATTCAGGTGTATATGTTCTGCAATAGAAAGTTTACGAAGAATGCAAAATTACGAAGAGTAGGACGCAAACATCCTCCTTCTATCAGATCATCTGTCGCCCAATGACTTCCAATCTCTGGCCTGTTGCAAAAGGAAAAAAAAAAGCATCGATCGAAGACCTCGCATGCAGTTCATCTGGCAGCCGCTTCTCAAGATTCAGTCAGCAGAGAGCTCGATGCGTAGTAAACAATGGACCAGAACAAAAACCAAACTAATCAAATATCTCAAAATAAAAGTGGTGGCTGTTCACATATGACCCCGAGTAGAGTGTCCGTCATGCGGAACAGCGGAAGCATTGAAGGAGGGCCGGGGGATGGCGACCCTGTCTGGCAGATCAGGTAGAGAGCGGTGCCTACTCGGCAAGCAAGCAATCAACGAGAGACAATAGTCTGCATAGGAGTAACGAGGCAGAGTTCGACCATTGTGTGATTGGATCCAAAGTCCAATCTTAGTCCGGTGAATTGGACGGCTCTTTGGGGTCTTCAACTGTAGCATTATGGACGCCCTTGTAAGAAGCGTCCCCATCTGGACGTTGTCTAAAACAGCGTCCACACCTGGACGCCCTATGCAATAGTGTCCTTCCTATTTTCGTAAAAATTGACTTTGCTTTATTATATATTTAATTTCTGCATTATTAATTATTATGAATAAAAAATTCGGCCTAATCAACATCACAACAAGAACCTCTGAATTAAAAAAAAACACAGTAATAACAGGTATAAGTAACAAACCACAACGAACCCTAATAAGTTCAGATAATAGAAAAGGTCTTCTCAAGATTCAGTCATGGCGATCGCCGCAAGCAGGGCCAACGCCAACGCCAACCGAAGCCGCCACCATCATCAACCGAGGCGGTGGGAAAAAAATTCCTCCCAATGCTGGCACGCACGCGCACTCGCTCGAGAATCCGGCGGGTGGGACTGAAAAAACAAAACAAAAAAAAGCAGATCGATTTTGTCATCTGCGGCGCAAAGCGGGTGTGCATTTCTTTTCTTTTATCCCCACATCCAGTCACCGTGACGTGGTTCTTGATTCCTCAGGCCGGGCGATTATTCTAGCTCTAGTTGGGATGATTGGATTGGATCCCCAGCCAGCAGCAGCAAGCAATTCTTGGCCATCGGTTGTGGGTGGCTGTTGATTCATGCATCACGAGCACTCAATAAAGTATGCAGATCTGTGCGCCCCTCTCTGATTTGTTCATCCAGGCAAAAGAGTATCTTGCTTCTGTGAGGTGAGGTGATTGATTGATTGATCAATGGGGGTGGATTGTTTTCAGGGAGATGTGTATATGTTGTGTTTGCAGTAGCCCATGGTTTCTTGGCAATTGTTAGTTTTCTGATCACAGTGGTTCAAGTTGGTTGCCTTTTTTTATGGTTATAAGCGATGTGCTCTGAACTTCTGATCCAGATTTCGATCCAGTTCTGCCTGCGATTCTTGAGTTTTTATGTGTTCCATGTCAGTGTCTGAATTTTTGACAGGCAGTTTTCAGGGTGAGCAGGTGCGTTCAGGTTTCAGGTATCGTTGTACAGAAATTGACTCGAAACTGCTCATGACTTTTTCAGGATACTAAAGCGTGAAGTGTTGGGGGTTAGCTTTTGATTGAAGCCATCGAAAATTTTCCAGTGAACTTTCAGGCCCTGCTGAAAGAAGAATCTACTGAAAGGTTGGTCTAATCTACTCTCTAAAGTAATTTAGATCTTCTTTATGAGGAGCCCATCATTGGTCCGGTGATGATTTTAAGATCGAAGTTTCTACCCTCATGATTGGAAACTATCACAGATGGTTCACAAGACGAAACTGTGTACTTCTGTTTGCTTATATATATCTGCATACCTCGCATCATTACAGTGCTGGTTTTCAACTCGTAATTCTTTCAGAGGGAAGATTCGTAACCTTGGAAGATATGCTGCCTTACTTTGATCCGGAGTATGAGAACTTCAGTCAGCGCATCAACCCTCCTAGGTGGATCTCTAATTTAAACATCTAAATTCCAGAGCTCCTCATATCATTATCCTGTTTCATTTCAGGCTATTGTCGGAAGCTCCGCTACTTTCTGTAGCTAACAAGCTGATAATTTTCTGCAGGGTATGCATTGACAACAGCACCTGCAGCGACTTCACCTTAGTGAAGGTAAGAACTACTTACTACTCTCTCTCAAAACTTGACTGGATAATCTTACTGAACACTGCTTCCAATATTCAAGAACCGTTTCACTGATTGCTTCGAGCACCGTCTGTTTGCGTTTGGAGGTAGGTCGACAGCATGAACAAGAATGGCATCCTGTTGGAGGTGGTGCAAGTTCTGAGCGATCTCGATCTCGCCATCTCGAAGGCGTACATCACCTCTGATGGTGGATGGTTCATGGATGGTAAGGCAGCCTATGCTATGCAATTATATCATATATATGCAAACTCATGTATGGTTCGCGGACATCAATTGCCGGTTTATTCATGATGTCTGTTACAATCTGATGCAGTGTTTCATGTGGTGGACAAGCAAGGGCAGAAGGTGACTGATGAGAAGACCATTAAGCACATTGAGAAGGTTTGTAATTTTTTTTCCACCTGAAAATTGGTCTTAAAATTTACCACCTGAAAGTTGAAAACCTATTTTATCCTCTATATCAAGCTTTCAGAATTATTTTTGGTGCAACTGCATCCTGATAGTGTTTGGTTTGAAAGTATTGGTAGTTTAGGTGAAGTATTTTCGTATCTGTTCATCATGTCAGTATGTGTTTCAGTTTTTGAAAAACATTTTAAAGGTTTTCCTTTAATGAATTACAAATTTAGACCGCAGTACTATTTTTCATGAGGTTTTTGGAATGGATAGTGGAGATATGGAGCCAACAATTCCTTTGAAAACTTTCCATGAAATCAAGAATTTTTTTGTGACTATAGATTTACACTGAAGTGTAAATTAAAGTTGAAGTGAAAAACTGAAAACTGAAGTGGCAGTATCAATTTGGTTAAAATTGCAGGCGTTAGGCCCAGACAGCAACCTGCTGGGTGGCGCGAAGGGCGGGTCGTCGCCGGTGAGGTCGGTGGGGATGCACTCCATCGGCGACCACACCGCCATCGAGCTCAAGGGGCCCGACCGGACGGGCCTCCTCTCCGAGGTCTTCGCCGTGCTCGCCGAGCTCGGCTGCAACGTGCTCGCCGCCGAGGTGTGGACGCACCGCGCCCGCGTCGCCTGCGTCGTGTACGTGAACGACGTCGCGTCGGGGCAGGCCGTCGGCGACCCGTGCCGCCTGTCCCGGATCGAGCACCGCCTCCGCCTCGTCCTCCGCGGCCACGCCGGCGGCGACGACGGCGACGGCGACGACGGCCCGGCGCATGCCAACTTCTTCTCCTCCGGCGGCGCCGGGTCGAACACCCACGTCGACCGGCGGCTCCACCAGTTGATGCACGCCGACGTGGACGCCGACGACGACGACGGCCTCGACAGCCGCGCCATCGTGTCGGGCGAGGCCGGGAACGCGGCGGCGGCGGAGGAGAGGCCGGTGGTGACGGTGGAGCACTGCGAGGAGAAGGACTACTCGGTGGTGAACGTCAAGTGCAGGGACAGGTCCAAGCTGCTGTTCGACATCGTGTGCACGCTCACCGACATGCACTACGTCGTCTCCCACGCCTCCGTCTCCTCCGACGGCATCTACGGCATCCAGGTGTGTACTCTGGACTCTAGCATGTCAACAGCTGCTACTACTATATCGAAGCTCCTACCACGACAATGCTAAGAATTTCACATGAAATAATTCGATTTGTAGAAAGAATATTCCTGCGTTTTAAAGGAGCTATGCGCCGCGACTCGGTCAACGTTGACTTTTGACATTGCAATGAACTTCCTTTTTTTTATTTTAATATTGTCAGGAGCTGTACATTCGTCGGAAGGATGGGCGCACGCTACAGAAGGACGAAGCAGGGAGGGTGATCAAGTGCCTTGAAGCGGCCATCTCCAGAAGAGTATCTGAGGTCTGAACCTTCTTTGCCACTGTCTGTACAAGCAACTAGCATCACTGCATCAGTAGAAGTAGTAACTGTTAGTAGTATTTTGCAAAAGAATTTCTGAGCTTGGCTGCATCTGGAACAAGGGATTAATCAGGACATGTTGCAGATTATGGTGTATAGTTCTCCTGGTAGTAAAGTCACATTGATTGATCGATACACTCACACTGAACTCTGTTACTAGTATGTCGGTTTTGCTACAGCACCTGGTACCACGTTAATCTGTTCATTTTTTTCAGTACACTGTTTCAGTTCATCATTTAGTTCTATTAACCAGTAGTAACATACTGCCCTTCTACCTGTCTTTTCTCCATTTTCATATATACCTTTGACTGAATTCTGATTCTATTTCTGAAAAAGAAAAAAGATAAAAGTCAGATTGAGTTACATGCACCGACCAGTACAATAGCTCGAACACCGAGAAGCAAATCCTCTGACTTAACTACACATGCATACACATACAATTGAGTCACTGACATGTGAGTTCCACTTTGATATGCCGTTAAGTCAGAGGATCTCTTTCAGCTCGAACTGGAGCTTGAATATGTGCTAACACTGGTGGTTGATGATGCAGGGATTCACCCTGGAGCTGTGCGGCAGGGACAGGGTCGGGCTGCTGTCCGACGTGACGCGGGTGCTCAGGGAGCACGGCCTGACGGTGACGAGGGCCGACGTCACGACGGTCGGCGGCCAGGCCATCAACGTCTTCTACGTCCGCGACGCCTCCGGCGAGCCGGTGGACATGAAGACCATCGAGGGCCTCCGCGTCCAGGTCGGCCACACCGTCATGCTCAACGTCAAGAAGGTGCCCTCCTCCCCCTCCTCCTCCTCCTCCGCCGCCGCCGCCAACGGCAAGTCGCCGGGGCAGCCTGCCTCCGGCGCCCTGTCCAGGACCAGCTTCTTCTCCTTCGGCAACCTCTTCGCCAAGCTCAGAGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008423