Os07g0176900

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Revision as of 08:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0176900| Description = Similar to Ribose-5-phosphate isomerase precursor (EC 5.3.1.6)| Version = NM_001065558.1 GI:115470848 GeneID:4342543|...")
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Gene Name

Os07g0176900

Description

Similar to Ribose-5-phosphate isomerase precursor (EC 5.3.1.6)

Version

NM_001065558.1 GI:115470848 GeneID:4342543

Length

2131 bp

Definition

Oryza sativa Japonica Group Os07g0176900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:4100156..4102286

Sequence Coding Region

4100291..4100728,4101783..4102187

Expression

GEO Profiles:Os07g0176900

Genome Context

<gbrowseImage1> name=NC_008400:4100156..4102286 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:4100156..4102286 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgccaccgtctccgtccgcttccacccggccgcatccgccgcgcgctgcggcggcggctcgcgccggagcaggcgcctgtccggggtcatcagggcgcagtcggcgccggcttcggcggcggcggcggcgctgacgcaggacgacctgaagaggctggcggcggtgcgcgcggtggagcaggtggagagcgggatggtgctggggctggggaccgggtcgacggcggccttcgccgtcgcggagatcggggcgctgctggcgtccgggaagctgagcggcatcgtcggggtgcccacctccaagcgcacgttcgagcaggcgcagtcgctcggcatcccgctctccaccctcgacgaccacccccgcatcgacctcgccatcgacggcgccgacgaggtcgatccagaccttaaccttgtgaaagggagaggtggtgcccttctccgggagaagatggttgaggcagcatcagacaagttcatcgttgttgttgacgagacaaagctagttaccggcttaggagggagtggtctagccatgcctgtggaggttgtgcagttctgctggaagtacaaccaagtgagattgcaggatctgtttaacgatgaaggatgcgaggcgaagctgagattggatgaaggcggcaaaccctacgttaccgacaactcaaactacatcgttgatttatacttcaagacgccgatcaaggatgcgttggcagcagggaaggagatctcagctttggaaggcgtcgttgagcatgggctgttcctggacatggcgacttcggtgatcatcgctggaacagatggcgtcagtgtcaaaacaaagtga</cdnaseq>

Protein Sequence

<aaseq>MAAATVSVRFHPAASAARCGGGSRRSRRLSGVIRAQSAPASAAA AALTQDDLKRLAAVRAVEQVESGMVLGLGTGSTAAFAVAEIGALLASGKLSGIVGVPT SKRTFEQAQSLGIPLSTLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAAS DKFIVVVDETKLVTGLGGSGLAMPVEVVQFCWKYNQVRLQDLFNDEGCEAKLRLDEGG KPYVTDNSNYIVDLYFKTPIKDALAAGKEISALEGVVEHGLFLDMATSVIIAGTDGVS VKTK</aaseq>

Gene Sequence

<dnaseqindica>1559..1996#100..504#atcttcttcttccttccaccaccaaccccccatctcctccatctccactccacctcacacgcctcatcgacctcccaagaaccaccaccgccttctcccatggccgccgccaccgtctccgtccgcttccacccggccgcatccgccgcgcgctgcggcggcggctcgcgccggagcaggcgcctgtccggggtcatcagggcgcagtcggcgccggcttcggcggcggcggcggcgctgacgcaggacgacctgaagaggctggcggcggtgcgcgcggtggagcaggtggagagcgggatggtgctggggctggggaccgggtcgacggcggccttcgccgtcgcggagatcggggcgctgctggcgtccgggaagctgagcggcatcgtcggggtgcccacctccaagcgcacgttcgagcaggcgcagtcgctcggcatcccgctctccaccctcgacgaccacccccgcatcgacctcgccatcgacggcgccgacgaggtccgcctcgccaccaccccctctccttccttccttttacatcatcatgagtcctcaactgttttcctcaatccattgagggacaaaaaaattcagttttcttggattagttcagttcagttccattccgagtgaaaaaaaggaattcaggcttgcattgctttcaacatggggaggtctgactttctaccatgtgctaagcctatatgattgtcctgcaatcaccgttcatggagacttggagagaaaatgaggcttttcttttggacttaaccttgataatgtttttctttctctggataaaaagttgtaggtgtgaatgtgtgatggtcctatggtagctttatggataaagttggacaaaaatgcaaatcttgtatatggttctagctaaagagtagtaaaggagctaattggcaggtcacattttagatactactcctatgaaggagaaaacaatctaaacagtgcaatttttgaaagaaaactttctgtatagaagttcctttaaaacttcaaataaatccctttttcaagtttgtaatagctaatagtatcatgtgttaattgcccagccaataccgatcagcccagtagctgatcagcaaaacagcccaatggaaagggtagcttgtctgtcagctcagtgactactcgctgttagtgccatgaacttcactagaatcactactaaactcttagtcaaccgtgtaaaaattgcaccgttgtactcttggtactcgtggctggtgttgccttcttattatgcagattagccgtagtaattcgggagtatctgtttttgtccttgtccttttctctgtgtagctttgtatctgaaagtaggccatttagcaacacatctctattgtaaaatgctttaacagtgatgataaagttagcaggatcaagccatgacatgcaaacagctgctctatggtcaaatattatgtaattttattgtctatgatttggtatcctcgtccctgcttttctcccaagtcaccattttatagctacctacctgaatacctccattttggtatcaaaacaggtcgatccagaccttaaccttgtgaaagggagaggtggtgcccttctccgggagaagatggttgaggcagcatcagacaagttcatcgttgttgttgacgagacaaagctagttaccggcttaggagggagtggtctagccatgcctgtggaggttgtgcagttctgctggaagtacaaccaagtgagattgcaggatctgtttaacgatgaaggatgcgaggcgaagctgagattggatgaaggcggcaaaccctacgttaccgacaactcaaactacatcgttgatttatacttcaagacgccgatcaaggatgcgttggcagcagggaaggagatctcagctttggaaggcgtcgttgagcatgggctgttcctggacatggcgacttcggtgatcatcgctggaacagatggcgtcagtgtcaaaacaaagtgagttttggggttttgttgttgccggtgttgaatttacgattttttgttgggatgtataagctattggggtgtaaaagcaggcaataagatgcttcactaataataattgaatatatttccccactctttcattgct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0176900, RefSeq:Os07g0176900