Os07g0177000

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Revision as of 08:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0177000| Description = Conserved hypothetical protein| Version = NM_001188147.1 GI:297725424 GeneID:9266277| Length = 5257 bp| Definition ...")
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Gene Name

Os07g0177000

Description

Conserved hypothetical protein

Version

NM_001188147.1 GI:297725424 GeneID:9266277

Length

5257 bp

Definition

Oryza sativa Japonica Group Os07g0177000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:4102966..4108222

Sequence Coding Region

4102966..4104024,4106090..4106159,4106880..4106945,4106985..4107479,4107491..4107672
,4107728..4108222

Expression

GEO Profiles:Os07g0177000

Genome Context

<gbrowseImage1> name=NC_008400:4102966..4108222 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:4102966..4108222 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggagcaaggcggcggcgtctgctgggcgtatctgccggccgagctggcggagctcatcgccgcgggggggggggggggttcgtcgacggactacgtccggttccgggcggtgtgctcgccgtggcgcgccgccgcgccctccccgcggggccgcggcgtgctggaccctcgcctccaccccggcgcgcggtggatgatgttcccggagggcttcggccgcttcccgggccaccgcgcgctcgccggccacgcccgcttcctcgacctctccgcctccgccgccgccgcactcatccgcgtccccctcccgttcctccgcgaccactgcgtcctcgactccccagacggcctcctcctcctgcagcgcgacggggacaccgccatccgcctccttcaccccttcaccggcgacatcgccgagttccccccgcctcgattccctcgcccaccagctcctccacctggacttcgaccccaccgtcgatccgatatccgcaagatctgcgccgccgtcgatgtcgccgatgaggggattgttaccgtgatgctcgctgtcgaaaagattgggcgcgtggcgttcgcggcggccggcgacgacgattgggtcatcagcacatggaaggagaaccaattggacaatgcattgtcattccaggggggaagctgtatgtgggatgggctgattcatgcctcggtgatcgatccgccgcgacggcggcggcgtgagggggaggaatcggtggcgcagccgccggtgcctcctccaaggaggatcgcgacatgttcgagcgaggagatccacctgccttctctagtggaattggactccgagctcatgctggtcggctacaatggcagctccctctcgcgcattttggttctcaggcttgctgatcttgccatgggtatgattgtgccagtggcgaacattggtgaccatgtcctcttcatcggtgcgcggagcctgtgcgtctcgcctggctggttaccgtccattcgtggcaactccattgtgtgcttccatgccggagagaactaccttgctcagtaccatcttggcaccggctcttggtcaccggcaagtgatggacagctgatgcttagccctccatcgcgcccgtgtagcctcatccatcacatcttcacctgttgctatcgccaattctgttatatatccagcgtgttatatggcgatttggtctccggttcagctaaggttcagacgtgcagtaggaacaaagggctgatattttgttccgagtcagagcctgaatggtgggcgatgcggaagtaccgatatggggatagcactaggcaaggttttcacccaaggctctctcaaactgctccacctcaaaaccctcgtcgcgttgccgggacgttcgttgagggtcatcgttgccgagcttgcaagacaagcagctccgactccacctcaacagccaaccctgcagctcgaccagagaccacctcacacccaggaacccaactgcaggaaaccaacggcgcggccgacgaccagcgaacaggatgccgaaacaactccgcacgccacccctaccgaaccacggaactccctggcatcgactggaagcagcttagcctaagaagggaggagcacctaagaagaggggagcggccgccgcaccgtcaaagagcaccggaagaacaactactgaagaaggggagaaccggatctggaggactagaagggagggagatggaggcgccttccccgtcgccggcaaaagccgcagtaggccggcagcccggccaggaccacgcggcagccggcgccagagcgcgctccgcgagagcaccactggacaaccggacgagccgccgccaaccggagagccgccgccaacctggttctgtcgtcgccgatgaaaccgcgccggagctgctacgtccgagggcgccggcgtcgaccaagaccgtcgccggccgcgccgagacccgccgccacgccgccgtcgtcaccccggccagatctggcgaggcgaccggatctggcgacgccctcgacggagccgcgcagagccccaccgccgcgccgccatcgccgcagggagctccaccaccacgccgtcgccgcgacctcgctgtcccgccgccgcgacctcgtcgtcctgccgccattgtcgccacacccgcgccggggcgagatggagccgagggagatgggcccgccgccgccatcccagcgcgtcgcccggctttgccggcgacgagctccagtggcggcgaagcagggaggagggaggaggaggggcggcggtggctagggtttcgcccccgagccgccgcgcgagggcgatgcgagggccgtgtattaccccctcctattattagcttttaa</cdnaseq>

Protein Sequence

<aaseq>MAEQGGGVCWAYLPAELAELIAAGGGGGSSTDYVRFRAVCSPWR AAAPSPRGRGVLDPRLHPGARWMMFPEGFGRFPGHRALAGHARFLDLSASAAAALIRV PLPFLRDHCVLDSPDGLLLLQRDGDTAIRLLHPFTGDIAEFPPPRFPRPPAPPPGLRP HRRSDIRKICAAVDVADEGIVTVMLAVEKIGRVAFAAAGDDDWVISTWKENQLDNALS FQGGSCMWDGLIHASVIDPPRRRRREGEESVAQPPVPPPRRIATCSSEEIHLPSLVEL DSELMLVGYNGSSLSRILVLRLADLAMGMIVPVANIGDHVLFIGARSLCVSPGWLPSI RGNSIVCFHAGENYLAQYHLGTGSWSPASDGQLMLSPPSRPCSLIHHIFTCCYRQFCY ISSVLYGDLVSGSAKVQTCSRNKGLIFCSESEPEWWAMRKYRYGDSTRQGFHPRLSQT APPQNPRRVAGTFVEGHRCRACKTSSSDSTSTANPAARPETTSHPGTQLQETNGAADD QRTGCRNNSARHPYRTTELPGIDWKQLSLRREEHLRRGERPPHRQRAPEEQLLKKGRT GSGGLEGREMEAPSPSPAKAAVGRQPGQDHAAAGARARSARAPLDNRTSRRQPESRRQ PGSVVADETAPELLRPRAPASTKTVAGRAETRRHAAVVTPARSGEATGSGDALDGAAQ SPTAAPPSPQGAPPPRRRRDLAVPPPRPRRPAAIVATPAPGRDGAEGDGPAAAIPARR PALPATSSSGGEAGRREEEGRRWLGFRPRAAARGRCEGRVLPPPIISF</aaseq>

Gene Sequence

<dnaseqindica>4199..5257#2064..2133#1278..1343#744..1238#551..732#1..495#atggcggagcaaggcggcggcgtctgctgggcgtatctgccggccgagctggcggagctcatcgccgcgggggggggggggggttcgtcgacggactacgtccggttccgggcggtgtgctcgccgtggcgcgccgccgcgccctccccgcggggccgcggcgtgctggaccctcgcctccaccccggcgcgcggtggatgatgttcccggagggcttcggccgcttcccgggccaccgcgcgctcgccggccacgcccgcttcctcgacctctccgcctccgccgccgccgcactcatccgcgtccccctcccgttcctccgcgaccactgcgtcctcgactccccagacggcctcctcctcctgcagcgcgacggggacaccgccatccgcctccttcaccccttcaccggcgacatcgccgagttccccccgcctcgattccctcgcccaccagctcctccacctggacttcgaccccaccgtcgatccgatgtacatcttcaccggctggatttacaacacctccgctacccgattctcacaccagatccgcaagatctgcgccgccgtcgatgtcgccgatgaggggattgttaccgtgatgctcgctgtcgaaaagattgggcgcgtggcgttcgcggcggccggcgacgacgattgggtcatcagcacatggaaggagaaccaattggacaatgcattgtcattccaggggggaagctgtatgtggtgaattgcagggatgggctgattcatgcctcggtgatcgatccgccgcgacggcggcggcgtgagggggaggaatcggtggcgcagccgccggtgcctcctccaaggaggatcgcgacatgttcgagcgaggagatccacctgccttctctagtggaattggactccgagctcatgctggtcggctacaatggcagctccctctcgcgcattttggttctcaggcttgctgatcttgccatgggtatgattgtgccagtggcgaacattggtgaccatgtcctcttcatcggtgcgcggagcctgtgcgtctcgcctggctggttaccgtccattcgtggcaactccattgtgtgcttccatgccggagagaactaccttgctcagtaccatcttggcaccggctcttggtcaccggcaagtgatggacagctgatgcttagccctccatcgcgcccgtgtagcctcatccatcacatcttcacctgttgctatcgccaattctggtaaggttcttccttgttcttacaccaatgtatcttcagttatatatccagcgtgttatatggcgatttggtctccggttcagctaaggttcagacgtgcagtaggtaaaaagttaattgcttgttatgaggaagcctgagccgatttatatgcggatttgttaccgagtagaatatcctggtgaaaacccaaatattctgagtgatttcaccttaaggccccgttcgatctcctatttgggagttgaatttttgttgcatgcaaaacgagaaaactcatagcacataattaattaagtaataactattataaatttgaaaaatggatttatttgcttttttaaacaacttctatattttttagataataaacaacttctatatagaaacttttttttaaaaaaaatacaccatttaacagtttgaaaagcgtgctaacggaaaacgagaaagttgaagtttagagttgaagaatagaactagggcctaaggtttctatgaataagcggtgtcttaagttgttggagtattaccagcttttgttaatgattaggaagtctataagggtgggcctaatgtgattttcattcagggtactatgaaatacgaaatctgcacttctaagttcattttcggttagtctttgaacctcacatgctctttcattgtattgctgttttgtacctagtgatgtatcaatttaaattttactaattgttccctaaaaaatttactaattattatcagcatgttggttttacatggttcttgatcctttgttaaatcttttcttctatatttgcttagcttttgattaatatgtaggaacaaagggctgatattttgttccgagtcagagcctgaatggtgggcgatgcggaagtaccgatatggggtcagtttttcttctcatcctctttgtcgcttctaatgttataagcattagtagaatcattttcatctatatatcggtgatcttttcttgagtcagagacaagcttgctagtagtgcagtggcggagccaagaatttaaccctgtggtcgattaataccagtttatatttaagtgggatcatttttctaagttctctggatttatacataaaaatcgaggtttttaaaggggtttttcaaaaacctgtggggtcagacgaccccacaggatatgcatggatctgccactgtagtagtgtattattaatccttcagttagatacagagaaatatatgggtatttaccgcaattcaaaagccacagtctgaatacattaattcattttaattgatgttactagctgggtgctgctggtttttttttttttttgtgtgtgtgtgcccctgaaacattggatcattctttctactactcaaatgctactccttttgtgaatctattgttaccgaccgaacctggaattggttccagtaacataagttttgctgaaacctgaaaccggaattgtcactttttcttcgtgtttgtactttgtagttctcttcatctggtagattgcaactttcattatggaaattcgaaaggaaattgtaaaaaatggtgcaacaaggatcatatgagcatttgcattatatgcatagccagctatatcacttttttttttgtaattactagtttactaatagtgatgttgttctttttcattggccagacctgaaagacttgagctgggaaggacgttcgctgcaacttcattttgcatcaagcacaagagcaggaagctcagtctctgtgtttacttctgtagccaacctagaaacttaccctctgcaacttcagttatcccacaaatgctttttgatgaatccagaaaaaatggtgtattaactgtgaggattataacatagtggagtactagtttcttatcagccatgaaattaggaggtccatctgttttgttttccatgttttaggttggtaactgtctccctgatatcctggtgccttttgctgcgtttgttgactgaagaaagcgtaaaagcgaatgtacgctttcaattagtccaacactaggctgctatgctgatagatcaagaagaggtcaaaataatcaggaccaggagccaactatcctgcttggagtcttgacccttcgcttaaagaaaaagaagaaagaaaagaaaacagctacctgaacattgacttgtatttttgtaaaacaaaaagaaatcaaagatgcaggcaatgcaaaatggtgtacccaacagaaatgcccagcatagataagattacatgtcttttcctgatgtactaacattcttcatgtaaatttgacacatgactctcgaaaccatatggtgttttgaggtataccttacgattttataaagccgaaaaataaggatgcacatcctctgtagtactgcttgtagtagcaatggctgatatgtggtcccggtcccacacgtaagtgtctgctactgcatcagcagtactgcagacaatccccactagaaaaataatgcctcccatcgtttgtctttcatcgtggtttactgttctattattagctttttttttcaaggaaccgacggcaggagaatctcctgccggaatttatagaagaagagaattgacccagttaataagggaaaccgggcccgaaaaccaaacaagcacggttaattaaacgggaaaccggcaaaaaccaatacagaaaagaaaagaaacaactaatgagacctcacagaagtcgtcgttaccgagcttaccaaaaggcaagcagcttcgacaacataatgacgaggtctccagaaccaccaaacatcctctagtggagcagaaaccttctaagcgaagccttcaacaaggaaacaacatcaaagatgctgtcaacacccgttcagaaaggaacccggttttcacctgaaggaagagagaaccaacatgacgatacctccaaggaggaaacggcacccgcaagcatcgatatcatcaacctaggatagcactaggcaaggttttcacccaaggctctctcaaactgctccacctcaaaaccctcgtcgcgttgccgggacgttcgttgagggtcatcgttgccgagcttgcaagacaagcagctccgactccacctcaacagccaaccctgcagctcgaccagagaccacctcacacccaggaacccaactgcaggaaaccaacggcgcggccgacgaccagcgaacaggatgccgaaacaactccgcacgccacccctaccgaaccacggaactccctggcatcgactggaagcagcttagcctaagaagggaggagcacctaagaagaggggagcggccgccgcaccgtcaaagagcaccggaagaacaactactgaagaaggggagaaccggatctggaggactagaagggagggagatggaggcgccttccccgtcgccggcaaaagccgcagtaggccggcagcccggccaggaccacgcggcagccggcgccagagcgcgctccgcgagagcaccactggacaaccggacgagccgccgccaaccggagagccgccgccaacctggttctgtcgtcgccgatgaaaccgcgccggagctgctacgtccgagggcgccggcgtcgaccaagaccgtcgccggccgcgccgagacccgccgccacgccgccgtcgtcaccccggccagatctggcgaggcgaccggatctggcgacgccctcgacggagccgcgcagagccccaccgccgcgccgccatcgccgcagggagctccaccaccacgccgtcgccgcgacctcgctgtcccgccgccgcgacctcgtcgtcctgccgccattgtcgccacacccgcgccggggcgagatggagccgagggagatgggcccgccgccgccatcccagcgcgtcgcccggctttgccggcgacgagctccagtggcggcgaagcagggaggagggaggaggaggggcggcggtggctagggtttcgcccccgagccgccgcgcgagggcgatgcgagggccgtgtattaccccctcctattattagcttttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0177000, RefSeq:Os07g0177000