BGIOSGA008538

From RiceWiki
Revision as of 18:51, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA008538

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008538, complete gene.

LocusTag

OsI_07901

Ensembl Transcript ID

BGIOSGA008538-TA

Ensembl Protein ID

BGIOSGA008538-PA

Length

2883

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24834760..24837642

Sequence Coding Region

24834760..24835010,24837068..24837445,24837618..24837642

Genome Context

<gbrowseImage1> name=IndicaChromosome02:24834760..24837642 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:24834760..24837642 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGACAGAGATTGATCATAAGACTAGCCGCCCAACCAGCTCACAGTCTAGTAGGCCAGGAAGTGCGCATTCGTCTCTTCCTGGGAGCCCTGGATCACAGACATCAGCTGTGGGTAGTGAAGGTGCGCCGAGGGCTCGGCCGAAGGTTAATCCTTTTGGGGATGCGAAGCCAAGAGAGGTAGTTCTTCAGGAGAAAGGCAAGGATTGGAGAAAGATTGATCTTGAGTTGGAGCATCGTCGAATTGATAGACCGGAGACAAACGAAGAGAAGGATTTGAAAGAACAGATTAACCTGCTTAGGGTGGATTTGAAAGAAACTGAAGCAAACATAAGCGACGAGGATAAAAAAGGTTTATCAGAAAAGTTATCCCAGATGGAAAGGGAACTGGAGCGTCTTACAGTTGAGTTGGACAACAAGGTTCGATTTGGGCAAAGACCTGGTTCTGGATCTGGCAAGGTTACTGCACATTTAAGTAATTCACCAGACGAATCACAGATTACAGAGTCAATGGAACAACCATGTTCCCGTAGCAGCATAGACCAAAATCCTAAACCAGCAGAAGAAAGGTGGGGGTTTCAGGGCAACAGGGACAGAGGCTCATTTGGTGGTAACAGAAATACAGACAGGTCGTTAACAGGGCAGAGATGGTGA</cdnaseq>

Protein Sequence

<aaseq>METEIDHKTSRPTSSQSSRPGSAHSSLPGSPGSQTSAVGSEGAPRARPKVNPFGDAKPREVVLQEKGKDWRKIDLELEHRRIDRPETNEEKDLKEQINLLRVDLKETEANISDEDKKGLSEKLSQMERELERLTVELDNKVRFGQRPGSGSGKVTAHLSNSPDESQITESMEQPCSRSSIDQNPKPAEERWGFQGNRDRGSFGGNRNTDRSLTGQRW</aaseq>

Gene Sequence

<dnaseqindica>1..251#2309..2686#2859..2883#ATGGAGACAGAGATTGATCATAAGACTAGCCGCCCAACCAGCTCACAGTCTAGTAGGCCAGGAAGTGCGCATTCGTCTCTTCCTGGGAGCCCTGGATCACAGACATCAGCTGTGGGTAGTGAAGGTGCGCCGAGGGCTCGGCCGAAGGTTAATCCTTTTGGGGATGCGAAGCCAAGAGAGGTAGTTCTTCAGGAGAAAGGCAAGGATTGGAGAAAGATTGATCTTGAGTTGGAGCATCGTCGAATTGATAGGTATGCCATAAATGGATTTGCCTCTTTATAACAAAGTTTACCTTTTATAGTATGCACAACTGTGCAATTAGCATTTGTCTTTGAATGCAATACTGATCAAAACAATTGAATCTTTGGGCCTGTGACCTTAACAATTATAGAGTGTGTTTAGCCATGACCTTTGGCTGCTTTATGCTTGTGAGTTGTGGTGGTGCTTAAGTGAAATAGCTTTTTGCAGAAGCATTTCGGCAGCACCTTGCAATAGTTCAAGTCAGCCAGACATTAGTTCTAATTCAGCTATGCACTCTTAAGTAGTTTCTATGCTTCTTTAAGCAAATTAATTTTGCACAGTGTTTACGAAATAAGCGTGGCATTTTTTTTTTGTGCTTGCTGGTTATTTCAATGGTTATATAACAATGAGCAGTTGCATGAATTGAACGGATATACCTTTTTTCTTTTTTTGCTTTGCTTTGAGAGATTATGAGAACTGCATTTACAGCAATAACTAGTTATGGTCTTATGGATAGTAACTATAATGGGAAACTTGTATTTTTTTTCATTACCTTTTCCATTTGAATGTCTTCTTATTAGTGCCATTGTAAGAACCTGGGAGGAAAAACTTTTATTCCTAATGAAAACTGGTTGGGACCTGTGCATGCATTTCCTATTTATATATTAACCTTTTAAAGGACATGGTCAAATTACAAAAACCATAAAGATTCCAAGTATATGTAAATATTAATATTCAACTGTTAGTTATGCCATCTTTTTATATTGCATATGCAATACCACACTGTGCTATTTCGCCACATTTGGTTGATTAATTGGAATGCACGTGACAAACTTTAACTCAATAGTTTATGGAAATTTCACTTTTAGTAGTTTTTTTTGGTGCGTGAATGTATAGGGTTTGTTCAACAGTATTCTGTTCAATTATTATGGTAATCTATACTCTATTACTACCATCGTGCATTTTACTTTAAAAATATAGATTCAATGATTTATAGTTATTGATGAAGATGACAATTGCTTCTGGCTTTCTGCAACGTTTTCCTTTCTTACTACTTTCACACTATAGCAAATTGCTCTTGCTTGCGTAACTCTGCGTTTTGAAATGTGTAGTGGTGTTAGTTTATTGAATTGCCTCATTGGTCACCCACTTGCTCATGCTTGACACTTTGAATGGTTATGGTTGTTACTTGTCAGAAGCCTGACAGTTTTTAACCTGTTTGTGTCATGCATCAACAATCTTGAGTGAAATCTCTGTACAATGGAAAAGCTATCGACCGTCAATAGATATGTTAAATAAAATAAATTTCATCTATGTTCTTGTGTATGTTAATTCCTCCAGCATTATCTCTACCTTGTTGTGTTTTTCACGAATTTTCAAATTTACTTTCGAAATGTTCCAGATCTGTGTGACCAATAATTGTTACCTGCCAGGTGCTGAGATTACTGTGGAACTGAAATTGTAATTTCTGAACCACCCAAGCCCTGATTTGTAACAATACTTGAACTGTCTTTGGTCCTAATATGCTATCATGTAGGATAATTTATCACCACTACCAGATATATGTAACTACTAGGAAAGACTAGCAAGATCATCGGTAAACTTTTTGAACCAGCTTTTCTTTTTGTGGAAATTTGTAGCATGATAATAGAATATTCTGGTGGTTCCTGGTTATCAAATACTTTGACTGTTCATGCATGTTTGCCTTTCTTTTTAACCAATGCCAATATTCTGGTCGTTGAAGCATGCATGTTCCTATAGTTTGTCGTTTCAACTTTCATATGGTTTGGGCCTTTGGGGAATGATTTTCTTCCTGTCTTTATGCTCAGTTCCTGGTTCCTACAGTCAATTGCTTTAGCCCTTGCCTTGTGGTTTGGACCTATTTACGTCCCTCGTTCCAATAACCAATCAATAATTGCTGGTCATGCCCAATTGCAAAATTAATCAATTTTACATTTCAATAGTTATATTGTGTAGTTTTGATGTTTTAAAAATCGCTGGTCCTACTGAAATTTACTCGTGTAATTTTATTGTTTTAAACATTTGTTCATGGACTTGAATGTTGCAGACCGGAGACAAACGAAGAGAAGGATTTGAAAGAACAGATTAACCTGCTTAGGGTGGATTTGAAAGAAACTGAAGCAAACATAAGCGACGAGGATAAAAAAGGTTTATCAGAAAAGTTATCCCAGATGGAAAGGGAACTGGAGCGTCTTACAGTTGAGTTGGACAACAAGGTTCGATTTGGGCAAAGACCTGGTTCTGGATCTGGCAAGGTTACTGCACATTTAAGTAATTCACCAGACGAATCACAGATTACAGAGTCAATGGAACAACCATGTTCCCGTAGCAGCATAGACCAAAATCCTAAACCAGCAGAAGAAAGGTGGGGGTTTCAGGGCAACAGGGACAGAGGCTCATTTGGTGGTAACAGAAATACAGACAGGTTTGTTTGTTCCTACTGTCCATGATGCTTATTAGCATAAATCCAACTGAACGCGATTAACATTGATCACAGTAACTTTGTCCTGTATTACTAGACATATCTGTCAAGTTTAGATCATTTATTAATTTTCAGCAGATGGTAGATGTGAACTCTTTGTCTACCTGCTTTTCAGGTCGTTAACAGGGCAGAGATGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008538