BGIOSGA008568

From RiceWiki
Revision as of 18:52, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA008568

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008568, complete gene.

LocusTag

OJ1791_B03.41

Ensembl Transcript ID

BGIOSGA008568-TA

Ensembl Protein ID

BGIOSGA008568-PA

Length

3015

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:25242815..25245829

Sequence Coding Region

25242815..25243567,25244429..25245829

Genome Context

<gbrowseImage1> name=IndicaChromosome02:25242815..25245829 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:25242815..25245829 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAAGCCGGCGTCGTGCTGCTGCTACTTCCCGCTGCGGTGGGAGAGCACCGGCGACCAGTGGTGGTACGCGTCGCCGATCGACTGGGCGGCGGCGGACGGCCACTACGACATCGTCCGGCAGCTGCTGCACCTCGACCCGAACCTCCTCATCAAGCTCACCTCGCTCCGCCGGATCCGCAGGCTCGAGGCGCTCTGGGACGACGACGCGCGCTTCTCCGGCGCGGCGGGGCACCGCGCGGGCGTCGCCCGGAGCCTCCTGCTGGAGTGCGAGTGCAGCAAGAACGGGGGCGCCGCCGCCGCCGCCGAGAACACGCTGCTCCGGGCGGGGTACGGCGGGTGGCTGCTCTACTCGGCGGCGTCGGCGGGGGACATGGCGTTCGTGCAGGAGCTCATGGAGAGGGACCCCTTGCTGGTGTTCGGCGAGGGCGAGTACGGCGTCACGGACATGTTCTACGCCGCCGCGAGGGGTGGGAACGCCGAGGTGTTCAGGCTGCTGCTGGACCACGCCATGTCGCCGAGGTGCTCGACGAATTGCCCCAACGGCGGGGAAGGCGCGCGCGGCGGTGGCGGTGGCCGCTCCTCGGTGTTCCGGCTGGAGATGATGAGCAGGGCGGTCCACGCCGCCGCGAGGGGCGGCAGCGTGGAGATGCTGAGGGAGCTCATCGAGCGCCGCTCCGACGTGTCGGAGTATCTCGACTTCCGTGGATCCACCGTGCTGCATGCTGCTGCAGGGAGAGGGCAGCTAGAGGTTGTCAAGTACCTTATGGCCACTTTCGACATTGTCGATTCGACTGATAATCAAGGGAACACGGCATTACATGTAGCGGCCTACCGAGGGCATCTGCCTGTTGTAGAGGCATTGGTTGCTGCATCTCCATCAACCATTTCAGCTGTTAACAGAGCTGGTGATACTTTCCTTCATTCAGCAATTGCAGGTTTCAGAACCCCAGGCTTCCGACGGCTTGACCGCCAAATGGAGCTTATGAGACACCTGATACGTGGAAGAACATCAGATATCCAAAAGATTATCAACCTGAAGAATGATGCAGGCCTCACAGTCCTTCACATGGCTGTGGTTGGTTGTGTTCATCCAGACCTCGTCGAACTCCTGATGACAACCCCATCGATCGACCTCAATGCTGAAGATGCCAATGGCATGACTCCACTGGCATTACTGAAACAGCAGCTGCGCTCTTCAACATCTGACAAGCTCATCAGGCAGATAGTTTCCGCAGGAGGGGTGCTGAATTCGACTGTTCTGCGAACTCGGTCAGCGATCGTTTCGCAGATAAAGATGCAGGGAGGGATTGCAAGCAGCCCCGGTACAACTTTCAAGATATCAGATGCAGAGATCTTCCTCTACTCCGGGATCGGAACCGCGGAGTCCCGACGCCCTAGCTCATGCTCTAGCAATGGCAAGTGTGACCATGCCCATCATGGAGATGCAAAATGCGGAAATGCTGAAAACCATGGATCTTCAGAGAAGAGGCTGAGCTCTGCCAGCCGTGCCAAGGACCGTCTCAAGCTGATGCTGAAATGGCCTCGTCAGAAGATGTCCAGAGGACACAAGAAATCCGACGATGGCGACGCCATGGATTCCATCAAGAAGCTGAGCGAGCAGGCCGTCGAGACCCCGGCCCCGCTCAGGCAGACATTCACCAAGACGACGGCGCTGAACAACAAGAGGACCCTCGCGGTGAAGACCTCGACTCCCAGCTCGGCCACCAAGAAGAAGCTCAACAGCAAGCTCATCCACGGCATCATGGAGGCCATGCCGCACCTGGCGTCCTCGTCTCCGGCGTCCGCCTTCCCGAGGTCCTCCACCCCGCCGCCGCCGCAGTCCGGCAAGATGAAGGGCGTCTGCCTGGAACTGGACGACGAGAACTCGATGACGACGCCGGTGTTCGGCAAGCTGAAGGACATCGTGCTGAACAACGACGACGATGATGACGCCATGGGCGAGCCGTCGAGCTCGGGGTCGTCCGTGAACGACGACGCGTCGGCGGAGATGCCGGCGCGGCGGCACGGGTGCGGCAACGGGAGGCTGATCAACATCTGCTTCGGCGCGCAGGGCCTCACCGTGGAGGACTCGGCCAGCGGGCAGCAGACCAGCAAGATGTTCAAGCAGCAGTGCCTCAGGGTGTCCTGA</cdnaseq>

Protein Sequence

<aaseq>MEKPASCCCYFPLRWESTGDQWWYASPIDWAAADGHYDIVRQLLHLDPNLLIKLTSLRRIRRLEALWDDDARFSGAAGHRAGVARSLLLECECSKNGGAAAAAENTLLRAGYGGWLLYSAASAGDMAFVQELMERDPLLVFGEGEYGVTDMFYAAARGGNAEVFRLLLDHAMSPRCSTNCPNGGEGARGGGGGRSSVFRLEMMSRAVHAAARGGSVEMLRELIERRSDVSEYLDFRGSTVLHAAAGRGQLEVVKYLMATFDIVDSTDNQGNTALHVAAYRGHLPVVEALVAASPSTISAVNRAGDTFLHSAIAGFRTPGFRRLDRQMELMRHLIRGRTSDIQKIINLKNDAGLTVLHMAVVGCVHPDLVELLMTTPSIDLNAEDANGMTPLALLKQQLRSSTSDKLIRQIVSAGGVLNSTVLRTRSAIVSQIKMQGGIASSPGTTFKISDAEIFLYSGIGTAESRRPSSCSSNGKCDHAHHGDAKCGNAENHGSSEKRLSSASRAKDRLKLMLKWPRQKMSRGHKKSDDGDAMDSIKKLSEQAVETPAPLRQTFTKTTALNNKRTLAVKTSTPSSATKKKLNSKLIHGIMEAMPHLASSSPASAFPRSSTPPPPQSGKMKGVCLELDDENSMTTPVFGKLKDIVLNNDDDDDAMGEPSSSGSSVNDDASAEMPARRHGCGNGRLINICFGAQGLTVEDSASGQQTSKMFKQQCLRVS</aaseq>

Gene Sequence

<dnaseqindica>1..753#1615..3015#ATGGAGAAGCCGGCGTCGTGCTGCTGCTACTTCCCGCTGCGGTGGGAGAGCACCGGCGACCAGTGGTGGTACGCGTCGCCGATCGACTGGGCGGCGGCGGACGGCCACTACGACATCGTCCGGCAGCTGCTGCACCTCGACCCGAACCTCCTCATCAAGCTCACCTCGCTCCGCCGGATCCGCAGGCTCGAGGCGCTCTGGGACGACGACGCGCGCTTCTCCGGCGCGGCGGGGCACCGCGCGGGCGTCGCCCGGAGCCTCCTGCTGGAGTGCGAGTGCAGCAAGAACGGGGGCGCCGCCGCCGCCGCCGAGAACACGCTGCTCCGGGCGGGGTACGGCGGGTGGCTGCTCTACTCGGCGGCGTCGGCGGGGGACATGGCGTTCGTGCAGGAGCTCATGGAGAGGGACCCCTTGCTGGTGTTCGGCGAGGGCGAGTACGGCGTCACGGACATGTTCTACGCCGCCGCGAGGGGTGGGAACGCCGAGGTGTTCAGGCTGCTGCTGGACCACGCCATGTCGCCGAGGTGCTCGACGAATTGCCCCAACGGCGGGGAAGGCGCGCGCGGCGGTGGCGGTGGCCGCTCCTCGGTGTTCCGGCTGGAGATGATGAGCAGGGCGGTCCACGCCGCCGCGAGGGGCGGCAGCGTGGAGATGCTGAGGGAGCTCATCGAGCGCCGCTCCGACGTGTCGGAGTATCTCGACTTCCGTGGATCCACCGTGCTGCATGCTGCTGCAGGGAGAGGGCAGCTAGAGGTGAGGCATCTACTTCTTGGCCATTGCTTACTTCACTACTTCTGCAAAATGCACCATAGTGAACTTCTGTTTGTGCCAATATGCATGGATGACAAGGTAGATGCCCATTTCATCAGGATGTTTGGGTGAAAATATTTCTAAACTCGATATCTTTCAACGTTATGAAACCAATTTTGCCTTTTGATGCGCTGCAGGTTCTTACCCGGTAATCGATTTCAACATAAATATTAAGGAACAAATTATTTTCATTCGTCCTATGTGATGATTAGTTTGAGCTTGGAAGGATATTGTTCAGCTAGAATGCTGCGTGTAACCCAAGGAGACATTGAGATATGTAGATAGTTGTCATTAAAGAACATTTTTTTTATCTTATATAATAAGCATACCACGCCCAGATGATAAAGGCTCATTTAGTTAATATCGTCATGCTCAACTCTCCAGTGTATTATGAACCAAAGAATAATTATAAAGACCATACTAATTTGGCCTCTTTGACATGGACTTCAAGTTGTGCAATTCATGACCAGATTTTCTTTAGGAATTTTAGTTAGAAGCAACAAAAGCTCCAATCATTGATCTCTCTCCAATAATTCGAGTTGAAAAGTGGATGTACTCCTTGTCGATCCAGTTTAGATGGGGGTAAAATCACACTTTTTAGATATATACGGTTCCTTTCTGTCTCTTGATGTTGATATTCAGCCAACTTTCTTTCTGTTTCTTGATGCTGATATTCAGCCAATATTTCTTGCCACAAATCATTGTAATGTTAGGTGTGCAAAGCTCCAGTTATATGCAAACTAGAATGGAAGTTTCCTTCTCCCAGTATTATGCCCTTATGTATGTAAAACATACCTCTTGCAGGTTGTCAAGTACCTTATGGCCACTTTCGACATTGTCGATTCGACTGATAATCAAGGGAACACGGCATTACATGTAGCGGCCTACCGAGGGCATCTGCCTGTTGTAGAGGCATTGGTTGCTGCATCTCCATCAACCATTTCAGCTGTTAACAGAGCTGGTGATACTTTCCTTCATTCAGCAATTGCAGGTTTCAGAACCCCAGGCTTCCGACGGCTTGACCGCCAAATGGAGCTTATGAGACACCTGATACGTGGAAGAACATCAGATATCCAAAAGATTATCAACCTGAAGAATGATGCAGGCCTCACAGTCCTTCACATGGCTGTGGTTGGTTGTGTTCATCCAGACCTCGTCGAACTCCTGATGACAACCCCATCGATCGACCTCAATGCTGAAGATGCCAATGGCATGACTCCACTGGCATTACTGAAACAGCAGCTGCGCTCTTCAACATCTGACAAGCTCATCAGGCAGATAGTTTCCGCAGGAGGGGTGCTGAATTCGACTGTTCTGCGAACTCGGTCAGCGATCGTTTCGCAGATAAAGATGCAGGGAGGGATTGCAAGCAGCCCCGGTACAACTTTCAAGATATCAGATGCAGAGATCTTCCTCTACTCCGGGATCGGAACCGCGGAGTCCCGACGCCCTAGCTCATGCTCTAGCAATGGCAAGTGTGACCATGCCCATCATGGAGATGCAAAATGCGGAAATGCTGAAAACCATGGATCTTCAGAGAAGAGGCTGAGCTCTGCCAGCCGTGCCAAGGACCGTCTCAAGCTGATGCTGAAATGGCCTCGTCAGAAGATGTCCAGAGGACACAAGAAATCCGACGATGGCGACGCCATGGATTCCATCAAGAAGCTGAGCGAGCAGGCCGTCGAGACCCCGGCCCCGCTCAGGCAGACATTCACCAAGACGACGGCGCTGAACAACAAGAGGACCCTCGCGGTGAAGACCTCGACTCCCAGCTCGGCCACCAAGAAGAAGCTCAACAGCAAGCTCATCCACGGCATCATGGAGGCCATGCCGCACCTGGCGTCCTCGTCTCCGGCGTCCGCCTTCCCGAGGTCCTCCACCCCGCCGCCGCCGCAGTCCGGCAAGATGAAGGGCGTCTGCCTGGAACTGGACGACGAGAACTCGATGACGACGCCGGTGTTCGGCAAGCTGAAGGACATCGTGCTGAACAACGACGACGATGATGACGCCATGGGCGAGCCGTCGAGCTCGGGGTCGTCCGTGAACGACGACGCGTCGGCGGAGATGCCGGCGCGGCGGCACGGGTGCGGCAACGGGAGGCTGATCAACATCTGCTTCGGCGCGCAGGGCCTCACCGTGGAGGACTCGGCCAGCGGGCAGCAGACCAGCAAGATGTTCAAGCAGCAGTGCCTCAGGGTGTCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008568