Os09g0453500

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Revision as of 07:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0453500| Description = Spectrin repeat containing protein| Version = NM_001069880.1 GI:115479502 GeneID:4347240| Length = 5576 bp| Definit...")
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Gene Name

Os09g0453500

Description

Spectrin repeat containing protein

Version

NM_001069880.1 GI:115479502 GeneID:4347240

Length

5576 bp

Definition

Oryza sativa Japonica Group Os09g0453500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17662490..17668065

Sequence Coding Region

17662773..17662805,17662963..17663003,17663502..17664006,17664259..17664699,17666981..17667095
,17667714..17667982

Expression

GEO Profiles:Os09g0453500

Genome Context

<gbrowseImage1> name=NC_008402:17662490..17668065 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:17662490..17668065 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgttctccttcgcctcaccggcgccgcagaatccgttccagacgccggcgcaggccccgtccctgtctccttcgccgtttcagttcaacctgcagcagccgcagcagcagcagcagcagccgccgccacagcaacaggcggcgccggccgcgcaaccgcagcagcagcagctgatgctatatacgacggacgggaagcccgcggggtacaacacgaagtgggaggagcttcacgccgagtcgcagaaggcgctgctccagatcgaggataaaataagggagtacagggacgagagcgagaggttggatcagtgttctcgccttcatgactcttcaatctcaactgtcaattttgagaatgatgcaagtgaaattgctcaggaacttggagggacaaccaccatgatggaaagagagaaggcttccgttcaagagttaatgactgttgtgaatgaaatgatgcgaaacacagaatttgctattaggtcatatatgatgctgagaccaagatttatccgtccaggtgctggagcaaatggtggtggctcaaatccttctggtcctgctggagctcagtccaatcagccagtagcattggctccaaccattgatttctatagtggtatcccaaagcggccttcccattttatgcaacagactatcaacaggtttgagaaatatcttggagaatgctgcaagtggatcgcggagctagagcagcttgttcaaatggagaacaataaaaggcaatcagcctcattagaatctctaccgaaggttatgtcgaatgtgcatgattatttcatctatgttgcttctaaggtggaaaatcttcatcaatatgttgagtcattgaaaactgaatatctacatgagcagcggcgattgggtaatgccaatgatccatttttagaggcaaatagacgagaagcggctaaacaagaagcagctgccagaagggtacatccaacattgcatttgcctgctcctgtacagcccacaactcaaattgctggaacagtgacgagtcaaccacagcaatcattgattccttctggagcgacttcttcaagtgcttttccatcattcagcactccagcttccgctccatcttcttcaagtctcttttcaactccaacaactccaactctatccagcaacctttttggtacatctggatcagcccagctgtccacaccatttgggacagtctctactccaacgcttggatcaacgccggctccatctggatttgggaatacaactccatcttttgcttcaacgcccgctttaggtggaacctcactgttttctacgccgttcggaggtggagctacagcttcaggatccagctttggtggtacatctaaagtgcggtcaaaacctcggggccgacgctag</cdnaseq>

Protein Sequence

<aaseq>MAFSFASPAPQNPFQTPAQAPSLSPSPFQFNLQQPQQQQQQPPP QQQAAPAAQPQQQQLMLYTTDGKPAGYNTKWEELHAESQKALLQIEDKIREYRDESER LDQCSRLHDSSISTVNFENDASEIAQELGGTTTMMEREKASVQELMTVVNEMMRNTEF AIRSYMMLRPRFIRPGAGANGGGSNPSGPAGAQSNQPVALAPTIDFYSGIPKRPSHFM QQTINRFEKYLGECCKWIAELEQLVQMENNKRQSASLESLPKVMSNVHDYFIYVASKV ENLHQYVESLKTEYLHEQRRLGNANDPFLEANRREAAKQEAAARRVHPTLHLPAPVQP TTQIAGTVTSQPQQSLIPSGATSSSAFPSFSTPASAPSSSSLFSTPTTPTLSSNLFGT SGSAQLSTPFGTVSTPTLGSTPAPSGFGNTTPSFASTPALGGTSLFSTPFGGGATASG SSFGGTSKVRSKPRGRR</aaseq>

Gene Sequence

<dnaseqindica>5261..5293#5063..5103#4060..4564#3367..3807#971..1085#84..352#agagcccactagcccccctcgatcccaccggcgacctcccgccgcctccgccggggacaagcccccctgcgcgccgcgctgcaatggcgttctccttcgcctcaccggcgccgcagaatccgttccagacgccggcgcaggccccgtccctgtctccttcgccgtttcagttcaacctgcagcagccgcagcagcagcagcagcagccgccgccacagcaacaggcggcgccggccgcgcaaccgcagcagcagcagctgatgctatatacgacggacgggaagcccgcggggtacaacacgaagtgggaggagcttcacgccgagtcgcagaaggcgctgctccagatcgagtatggtttccctccccggtttcccctattttgtggcaaatgagagtgcttgttcgtgattgaacttagtgtttaagcgtctttgcactgcaatttttttcttgatctgtagtcaactaaaattgctccatctgacttggtaaacgcaatccttgttggtatgctattattatttttttgttatatgggtatactagtcagcttaggccctagtggaatttgctgctgctgggttggtgataaggtggaaaagtagtttcttttttctgtctgtggtttagatttaacgctttatgcgataagcttgtgcctttacagtctctcagagatcagtttgctttaaacaaatatgttcttctagcaatatatactatggagggctactgtttctgatggtttagcagatcattgtttacttgggtttcaggggaaggggaaacacgttttgtgctctatgatctatgccatttgctacggattacttaagctactgcctcattttgcattgatgtggtcaatacatgggttttagggttagagagttcagtttctctgtttttgttacctgtttgggacttggcatgctattggtgtaatttttcactttgaattttgtagggataaaataagggagtacagggacgagagcgagaggttggatcagtgttctcgccttcatgactcttcaatctcaactgtcaattttgagaatgatgcaagtgaaattgctcaggttggacttgcttttcttgcttttgtcagtcgtacatgagacgcttgattatgtgagtcttttacccctatgccattaagaaagttgctgcttacctgtgtgccacaaaaaagtttggagttacgtgtatgccatgagcccaactttcgttgactcgtgtgccattttggatgaatggagacataacagaggtgttaggggctgtgtaaagacagttttgcccttgcagccccaccttcttccggcacgccacgcacctgttcggcttcgccggcgccgtcgacgatgatgcggcggcggttgcctcctccttccccttgagcgacgacgtcggcgccgtggcggccggagtcatggggacgatgatgttgggagtggaggcggtggcggtggccggcgacgtcgccttgaggtggtcgcggtagcacttggagcacatgttcttggtctccttgctgctgaagaacccacagctgctcgcgcacagcgctagctgctcgtcggcggcggcggcggccgtgctcgcctcctcctccttgttcgcgacgtcaggcgccgcggcggcaaccgccgctgacgacgccgcctccttgagttggtcccggtagcacttggagcagaggttcttggtcgcctcgctgccgaagaacccgcacccgttcgtgcacatcggcgcgccgccgccgcccgccgccgctagctagcccgatgctacaagtggtgacggtgtagccgcgctccggtcaccggagagatcagtcgtcagccctcgcggccggtgcttgctggagagatctcgccggcctgggcgcacggcgacgggtccggcgaggccaggcggcggcgacgggtccggctctgctaggcggcggcggcggcgtgcggctagggttagggtgcggcggcgtgcggcgcaatggggagagagcaggcactccacgggagatagcaggagaggagaatagagctgaaaatccttcaggggcaaattagtcattttcatacatggtcccacatgtcagaactacaaaaccgttaagttgtaacagaaggtggacggaatggcacacgggtcaacgaaagtttttctcatggcatacaggtgactccaaacttttttgtggcacataggtaagcaggaacttttttaatggcataggggtaaaagactctgattatgttggtcctatttcgtaactgatatgggattttgtcagttgacagtttagaaaaatagcagaacactttctagaagagatatttcagtattttttcacatagtcaacagtagaaagaatgagatgcctacacgcattgtcttcaaagaaacatatattgtacccattggaaaattgatcagttactgaccagcgaattagaaactataaaatcatgctcaatcaccttgagctctctattggagaactatgtctctgcttcctcttctttttaaggattaactgaaagtaaatataaactttgggctgcgaagatgacaagaacctctattttctgtaatgctttagttttgccctgaacaatgaacaaattagcacaatggagtatattgttaatgaaactcgataaagaaaataatcagcttatcccttgtagcaaggttgggttcaccatcctgattgtgcagcagtaagtgtaatcagatcattaacaggcattgttaattcaaaatcaatatctacccttaaatcttgaaatgttcctgagccacaaaatcataattagcttcaatttggatagcatatcaacgcatcagtgctgaagggtacatagttttaccttaaaactggagagggaatgaagttcataactatctcctacaacacacatttttatttagtggtaattcatggttcttttagttcataagttgactagttgataattattaggatttactgattcatgaaatacgaacacatgaatccataaaaaacattcctaattactacccactttggtcagaaacttgtggaactttaagtatcaaaatctttttcaatatttagattggaaaataaaaaaaacatatatgtagaatactagagttttcttggtaagtttcaaccaaaatactgtatttctgcgggactctataaatattttaaaatagaatcagttgttaaggttctgtgtgggaactgtgtcaatgtccaagacaatgtttttgtctaaccatgtaatgtatttatgatcacaattttgttacatattccttataccaatcctttaatttatggctaaatatttcctgctctaacaggaacttggagggacaaccaccatgatggaaagagagaaggcttccgttcaagagttaatgactgttgtgaatgaaatgatgcgaaacacagaatttgctattaggtcatatatgatgctgagaccaagatttatccgtccaggtgctggagcaaatggtggtggctcaaatccttctggtcctgctggagctcagtccaatcagccagtagcattggctccaaccattgatttctatagtggtatcccaaagcggccttcccattttatgcaacagactatcaacaggtttgagaaatatcttggagaatgctgcaagtggatcgcggagctagagcagcttgttcaaatggagaacaataaaaggcaatcagcctcattagaatctctaccgaaggttatgtcgaatgtgcatgattatttcatctatgttgcttctaaggtaaatctcctttttcatacacacactgcagttgaactgttaaaatgcatttattttgaggttctcccccatgatataaatcatttattatgtaatatagtcataaaaataaatgtaaatctgtaagtcaaccaaattttttttgtaacagctgtatctcgtgaaaaaaataagagagattgcttacttttaggcttgctgcactgccttggtgcgatacccagtattttctaatgtttgtattttttttaggtggaaaatcttcatcaatatgttgagtcattgaaaactgaatatctacatgagcagcggcgattgggtaatgccaatgatccatttttagaggcaaatagacgagaagcggctaaacaagaagcagctgccagaagggtacatccaacattgcatttgcctgctcctgtacagcccacaactcaaattgctggaacagtgacgagtcaaccacagcaatcattgattccttctggagcgacttcttcaagtgcttttccatcattcagcactccagcttccgctccatcttcttcaagtctcttttcaactccaacaactccaactctatccagcaacctttttggtacatctggatcagcccagctgtccacaccatttgggacagtctctactccaacgcttggatcaacgccggctccatctggatttgggaatacaactccatcttttgcttcaacgcccgctttaggtggaacctcactgttttctacgccgttcggaggtatacaaactctcaccatactatatttatatttcctaactgttagatagtcatatgcttatgataagtcagtagctatctgaaaacaatttggtacttttatgttgtgaaattctcattttagatgatctcgtcatggtatataaacatttctgaagtgttggcacatctacagtttgatttcatcatggcaattcatagctctaaatttgttgttatgtttttggtctgaactgaaatttgttattggcagcagagtacacttagttgtccattatttttccaagtgggttatatagctcaggcacacctgccgtgcatgcccttcactgtttctactcatctatggttaccgtccatattgaaattcaccagcaatattcttctttttatcctacttccaattgaacttacaaatatatcttttcctattctatacatgctatgatatcctgatttttggaaattgcatgacattctaacctgtgtctaccttaggtggagctacagcttcaggatccagctttggtggtacatctgtaagtataatctccatcaatttatgcagtattcttcccttttcagctatagcaaaggatataaccatgtcaagcataagctgtcctttttattgtcaatgttttattgttatataattcccatttcccaacaccttttttgtattgtatggtgcagaaagtgcggtcaaaacctcggggccgacgctaggtgtagctgatgagcgtgaaatgtgggtgcctcttgtatctctttttcctcgtctttcatttttccaagaatgcgcaaaatatttgcgtcttttcattaagacagagggaaaggttctcaccagtggttacaaattggtctgaactatggaaacatatttcagactcatattcctcctgtcttatggaaagaacttgtaattaatttatcggtgattgtagtggagcatgattggttttgtgacacttaatagattctaatgtatgtgccccatttcagtact</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0453500, RefSeq:Os09g0453500