Os07g0178100

From RiceWiki
Revision as of 08:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0178100| Description = Similar to ETO1-like protein 1 (Ethylene overproducer 1-like protein 1)| Version = NM_001065562.1 GI:115470856 GeneID...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0178100

Description

Similar to ETO1-like protein 1 (Ethylene overproducer 1-like protein 1)

Version

NM_001065562.1 GI:115470856 GeneID:4342548

Length

5152 bp

Definition

Oryza sativa Japonica Group Os07g0178100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:4150588..4155739

Sequence Coding Region

4151054..4151178,4151306..4153018,4153121..4153412,4154327..4154636,4155041..4155261

Expression

GEO Profiles:Os07g0178100

Genome Context

<gbrowseImage1> name=NC_008400:4150588..4155739 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:4150588..4155739 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggagcagcttcctgtcggaatcgccgtgcgacgagcagcatatccatggattcaatccgcagtcatggctgcaggtggagcgtgggaagctgcccaaatcgtcctactcgccttcctctatcgagtcgctgataaagatcgcggagccgccggtcgtaccattgtataagcccttggattatgtggaggtgctgtccaggatccatgaggagctcgagcaatgtgtgccgagcgagcggccagggctgtatttgatacagtcccaggtgtttcggggacttggggaggcgaaattgcgccagaggagcctgcattctgcgtggcgctgcgcgaccactgtgcatgagaagattgtgtttggggcatggctgcggtatgagaagcggggggaggatatcatatccgatgtcctcgcgtcatgtaggaagtgttgcaaagagtttgggccacttgatgtcgcatccgagatgcccgagggagactttgagatacttggttcttgtgatatcggcacatcttcgaaagtttcccctgtagtgaccttccaaataagggatgggaaggtgacatgcaataggtgcaagattgcttctctatcgatccctttctggtccatgctcaatggaccattcactgaatctcagcttgatcttgttgatttgtcggagaatggtatctcactggagggcatgagggctgtatctgaatttagttgtacatatagcttagaggatttgcctttggaaaccttgttggagatcctggtgtttgcaaatacattttgttgtgacaggcttaaagatgcgtgtgataggaaactagcttcatttgtttcatcaaggcaggatgctgttgagctcatggcattggcatttgaagaaaatgcaccagtcctcgctgcatcttgcttgcaagtgtttctgcaggagcttccagattgtctaaatgatgagcatgtagttagcctattcctaagtgcaactgaacagcagcaatgcatcatggttggacatgcctcctttttgttatattgcttgcttagtgaggttgcaatgaacattgatccaaggacggaggcaaccgtgtgcttgtcagagaagcttgttcaattggctgttactcctacacagaagcaaatagcttttcatcagcttggatgcattaggcttttaaggaaggaatataatgaagctgaacaccaatttagtgttgccttctcagctggtcatgtgtattccattgctggtcttgctagaattgctggtacaagaggtagaaagggtttggcttatgagaagctcagttcggtcataacatcaagtgtaccactaggatggatgtatatggagagatctctgtattcagagggtgataaaaagttgggtgaccttgacaaagcaactgagctggatccaactctcacttacccttacatgtatcgagctgcatccttgatgagaaaaaaggatgcaagacttgccttagaggaaatcaaccgactattgggtttcaagctagcattggaatgcttggagctccggatttgtctatatcttgctctcgaagactacaaatctgcaatttgtgatatccatgctatccttacactttctcctgagtaccgaatgttggaaggtcgtgtagctgcttccaaaataggcactcttcttggggcacatgtcgagcagtggaatacagctgagtgttggcttcagctgtatgaacgctggtcatcagtggatgatattggttccctttcagtgatttaccggatgcttgagtcagatgcagcaaaaggtgttttgtatttcagacaatctttgctgctccttaggttgaactgtcctgaggctgcaatgcgcagtttgcaattggcacggcaacatgcagcaactgagcatgaacggctagtgtatgaggggtggcttttgtacgatactgggcattgtgaggaggccctacaaaaagcagaggaatctatttctattcaaaggtcatttgaggctttctttctgaaagcctatgttttggctgactcaggtgttgatccttcttattctgcgactgttatatcgcttcttgaagatgcactaaagtgcccttcagaccggcttcggaagggtcaggctttgaacaatcttggtggtgtttatgttgattgtgagaagttagacgcagcagctgattgctacacgagtgctttgaagatccgacacactagggcacatcaaggtcttgcccgtgttcattttctcaggaataacagggatgctgcatatgaagaaatgacaaagttgatagagaaagctaaaaacaatgcttcagcttatgagaaacgttcggaatattgtgaacgagagcaaactatgacagatttgcaaatagtgacccagttggatccattacgtgtttacccgtacagataccgtgcagcagtactgatggatagtcacaaggagaaagaagcaattgcagagctaaccagggcgattgcattcaaagctgacctccacctattgcatcttcgcgcggcgttccacgagcatatcggggatgtccccagcgctcttcgcgactgtcgagccgccctttctctggatccaaatcaccaagaaatgctggagcttcagaaacgcgtgaacagccaagagccctaa</cdnaseq>

Protein Sequence

<aaseq>MRSSFLSESPCDEQHIHGFNPQSWLQVERGKLPKSSYSPSSIES LIKIAEPPVVPLYKPLDYVEVLSRIHEELEQCVPSERPGLYLIQSQVFRGLGEAKLRQ RSLHSAWRCATTVHEKIVFGAWLRYEKRGEDIISDVLASCRKCCKEFGPLDVASEMPE GDFEILGSCDIGTSSKVSPVVTFQIRDGKVTCNRCKIASLSIPFWSMLNGPFTESQLD LVDLSENGISLEGMRAVSEFSCTYSLEDLPLETLLEILVFANTFCCDRLKDACDRKLA SFVSSRQDAVELMALAFEENAPVLAASCLQVFLQELPDCLNDEHVVSLFLSATEQQQC IMVGHASFLLYCLLSEVAMNIDPRTEATVCLSEKLVQLAVTPTQKQIAFHQLGCIRLL RKEYNEAEHQFSVAFSAGHVYSIAGLARIAGTRGRKGLAYEKLSSVITSSVPLGWMYM ERSLYSEGDKKLGDLDKATELDPTLTYPYMYRAASLMRKKDARLALEEINRLLGFKLA LECLELRICLYLALEDYKSAICDIHAILTLSPEYRMLEGRVAASKIGTLLGAHVEQWN TAECWLQLYERWSSVDDIGSLSVIYRMLESDAAKGVLYFRQSLLLLRLNCPEAAMRSL QLARQHAATEHERLVYEGWLLYDTGHCEEALQKAEESISIQRSFEAFFLKAYVLADSG VDPSYSATVISLLEDALKCPSDRLRKGQALNNLGGVYVDCEKLDAAADCYTSALKIRH TRAHQGLARVHFLRNNRDAAYEEMTKLIEKAKNNASAYEKRSEYCEREQTMTDLQIVT QLDPLRVYPYRYRAAVLMDSHKEKEAIAELTRAIAFKADLHLLHLRAAFHEHIGDVPS ALRDCRAALSLDPNHQEMLELQKRVNSQEP</aaseq>

Gene Sequence

<dnaseqindica>467..591#719..2431#2534..2825#3740..4049#4454..4674#atcctctctttttcttcttcttcttcttctccccccttcctctgcatcgaagctgctccctgcagtcgcaggatcccgaatccgagctcctccccgccattgccgcgggggcgcggcttcttgatctgtggaattcgatcggggggcgcggggggcgcggaaaggtgggatttttgcggcgagatttgggacccatctttggcccgtttcttgtggatttcgttcgagttcttgtggttttggatcgggttggtggtggtggtggagctggaaaaaggtggttaccttggccaccaaattcccaaccctttttctgttcagattcttggcgttttcttgcgcaaattttagctagggttggtgtggattcccgctcgtacccccattagctcgtgattcgtatccaggttcgtgtaaaaatctgggagtggtggagatttgggaggttttctccttcctgtgctctatgaggagcagcttcctgtcggaatcgccgtgcgacgagcagcatatccatggattcaatccgcagtcatggctgcaggtggagcgtgggaagctgcccaaatcgtcctactcgccttcctctatgtaagggccactacatttgattcgaagattttcgattctctcaccgcgttcagctcatttctgtgtgatgctactgaaaattgaactagatatactgatgatttgtgccgattgtttggatgtgcagcgagtcgctgataaagatcgcggagccgccggtcgtaccattgtataagcccttggattatgtggaggtgctgtccaggatccatgaggagctcgagcaatgtgtgccgagcgagcggccagggctgtatttgatacagtcccaggtgtttcggggacttggggaggcgaaattgcgccagaggagcctgcattctgcgtggcgctgcgcgaccactgtgcatgagaagattgtgtttggggcatggctgcggtatgagaagcggggggaggatatcatatccgatgtcctcgcgtcatgtaggaagtgttgcaaagagtttgggccacttgatgtcgcatccgagatgcccgagggagactttgagatacttggttcttgtgatatcggcacatcttcgaaagtttcccctgtagtgaccttccaaataagggatgggaaggtgacatgcaataggtgcaagattgcttctctatcgatccctttctggtccatgctcaatggaccattcactgaatctcagcttgatcttgttgatttgtcggagaatggtatctcactggagggcatgagggctgtatctgaatttagttgtacatatagcttagaggatttgcctttggaaaccttgttggagatcctggtgtttgcaaatacattttgttgtgacaggcttaaagatgcgtgtgataggaaactagcttcatttgtttcatcaaggcaggatgctgttgagctcatggcattggcatttgaagaaaatgcaccagtcctcgctgcatcttgcttgcaagtgtttctgcaggagcttccagattgtctaaatgatgagcatgtagttagcctattcctaagtgcaactgaacagcagcaatgcatcatggttggacatgcctcctttttgttatattgcttgcttagtgaggttgcaatgaacattgatccaaggacggaggcaaccgtgtgcttgtcagagaagcttgttcaattggctgttactcctacacagaagcaaatagcttttcatcagcttggatgcattaggcttttaaggaaggaatataatgaagctgaacaccaatttagtgttgccttctcagctggtcatgtgtattccattgctggtcttgctagaattgctggtacaagaggtagaaagggtttggcttatgagaagctcagttcggtcataacatcaagtgtaccactaggatggatgtatatggagagatctctgtattcagagggtgataaaaagttgggtgaccttgacaaagcaactgagctggatccaactctcacttacccttacatgtatcgagctgcatccttgatgagaaaaaaggatgcaagacttgccttagaggaaatcaaccgactattgggtttcaagctagcattggaatgcttggagctccggatttgtctatatcttgctctcgaagactacaaatctgcaatttgtgatatccatgctatccttacactttctcctgagtaccgaatgttggaaggtcgtgtagctgcttccaaaataggcactcttcttggggcacatgtcgagcagtggaatacagctgagtgttggcttcagctgtatgaacgctggtcatcagtggatgatattggttccctttcagtgatttaccggatgcttgagtcagatgcagcaaaaggtgttttgtatttcagacaatctttgctgctccttaggttagttatactagcacctcactctgttgattcccttgtggccattttggtctcaactctcaacataactatagatgatgcttaatatttttttgtttacaggttgaactgtcctgaggctgcaatgcgcagtttgcaattggcacggcaacatgcagcaactgagcatgaacggctagtgtatgaggggtggcttttgtacgatactgggcattgtgaggaggccctacaaaaagcagaggaatctatttctattcaaaggtcatttgaggctttctttctgaaagcctatgttttggctgactcaggtgttgatccttcttattctgcgactgttatatcgcttcttgaagatgcactaaagtgcccttcagaccggcttcggaagggtcaggttagtattgttgcgcaccagcacacaaatgcttcaacgtagcattcacttatgctaattgatttgttttgaacacttagtttatctcacattgctcagacttggtaaggtggagagcaacttggttttcccaaactttctatatttttaagaccctgcatgctttgctcgacagtaaataaagcgaagataacatttaatattgttatattgttccctccaaacatttaagtatgaggcgtgagaaaattccttttatattgttccctccaaattgcgggaatattctgttttgcacatagactgagagatctctagctgctatagaaagctggatataacttagagtatagactatagagtgtatacacacttattttgcattgtgatattaaatatgccttaaatttttcaatgagaccattaaaaaaaacttgcatttgtggacagtgatcagttgtctcagtgaaataagagttgctggtgagaaaaggataatgttgtcttgtctggctaattataaattatattattgttcaaaactattccaataactcaaaattttatatccttgatgttgaggtatcatcagtgcaacatactatatacctactctgttttatgcatgtccatgatgtggagatgcatgaacaaaaagagagaagttaaagaatctgaacatgaaaagtgtcggttaacttaatcatggaccaaagggcgacattcttgctatgatttttgtctgaaattgatcctactagttaagacaaatagatcctaaatactgtattatgactgccagtaatacaaacatccaaaatttgatcctatcttgcttagtcagatccaacaagttgctctcgattgttccttatgataagcttttctctaatattgcataattccacctgcaggctttgaacaatcttggtggtgtttatgttgattgtgagaagttagacgcagcagctgattgctacacgagtgctttgaagatccgacacactagggcacatcaaggtcttgcccgtgttcattttctcaggaataacagggatgctgcatatgaagaaatgacaaagttgatagagaaagctaaaaacaatgcttcagcttatgagaaacgttcggaatattgtgaacgagagcaaactatgacagatttgcaaatagtgacccagttggatccattacgtgtttacccgtacagataccgtgcagcaggtaaaaagactaaagtttacttaatagttgagaattacctttagttttgaatactatgttactatgtaggttactctataccttatcttggcttctgcatggagaactgttaatttgttcatcatccttgctggacaaaacagatactttgttgctaccatcttttaagtagagtaaatgtctgctgtcattactgaatcttctttttgtcagagcaaatttagttagtgaactattgactgaactgcaccattgcagtattccttacctataatttcctctgtgtattcatttctcttatttgaacatgcaactttcaacactgaaagcgtgttttatatctgatgtagttgttttttaagaaatggagtagttaaaagatttttgatggctttggtttgcagtactgatggatagtcacaaggagaaagaagcaattgcagagctaaccagggcgattgcattcaaagctgacctccacctattgcatcttcgcgcggcgttccacgagcatatcggggatgtccccagcgctcttcgcgactgtcgagccgccctttctctggatccaaatcaccaagaaatgctggagcttcagaaacgcgtgaacagccaagagccctaacaaaaaattgtggtgccacttggtgcattgcataccatgatttttgcgctcataggtgcgcctcatgacagcccttgactccatccaattttcttcatttctttgttaattactgtaatatgatgtattcagcaagaaaggaaaaatgaaagcactagttctttggaagccatcatcgatgaatcttagcactcgatgactgctggcttttgtaaaagtaatgcctaatcactgaactgttgtctcctggaaatgaaaatcaccgtgcatgatgtaactttcaggcccctattttagctcccaattttttctgtaatgaaccttgcatgcaaattttgcaccattttagacctactttacctgtgggttttacagtcatcagatggtgtattaacatgtgtaaatgacgcgtcccttatatttaggggagtttctgctttcccttcagagtaaagtacagcttggttgcacttgcagc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0178100, RefSeq:Os07g0178100