Os07g0178600

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Revision as of 08:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0178600| Description = Similar to Heat shock transcription factor 29 (Fragment)| Version = NM_001065563.1 GI:115470858 GeneID:4342550| Leng...")
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Gene Name

Os07g0178600

Description

Similar to Heat shock transcription factor 29 (Fragment)

Version

NM_001065563.1 GI:115470858 GeneID:4342550

Length

3277 bp

Definition

Oryza sativa Japonica Group Os07g0178600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:4171312..4174588

Sequence Coding Region

4171812..4172144,4173468..4174253

Expression

GEO Profiles:Os07g0178600

Genome Context

<gbrowseImage1> name=NC_008400:4171312..4174588 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:4171312..4174588 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgatccaatgctgaatgcggtgaaggaggaggagagccacggggacggaggagggttggaggtggtggcgggagaggatggggcggcggcggtggcggcgggggtggcgccgaggccgatggaggggctgcacgacgccgggccgccgccgttcctgaccaagacgtacgacatggtggacgacgccggcaccgacgccgccgtgtcgtggagcgcgacgagcaacagcttcgtggtgtgggatccccacgccttcgccaccgtcttgctccccaggttcttcaagcacaacaacttctccagcttcgtcaggcagctcaacacctatggtttcagaaaggtggatcctgatcggtgggaatttgcaaatgagaattttctgcggggacagagacatcttctcaagaacatcaagcgtagaaaaccaccttcccatactgcttcaaaccagcaatcccttgggccataccttgaggtgggccactttggatatgatgctgagatagaccggctgaagagagacaagcaattattgatggctgaggtggtgaagctaaggcaggagcagcagaatacaaaggcaaatctgaaagccatggaggataggctgcaaggaaccgagcagaggcaacagcagatgatggcattcttggcgcgtgtcatgaaaaatcctgagttcttaaaacaacttatgtcccagaatgagatgagaaaggagctccaagatgccatttcaaagaaaagaaggcgtcgcatagatcagggacctgaagttgacgacgtcggcactagcagtagcatagagcaagagtcaccggccttgtttgatccccaggagtcggtggaattcctcatcgatgggattccctccgatcttgaaaactcagctatggatgctggaggtctggtggagccacaggatttcgatgtcggcgcctccgaacagcagcagatcgggccccagggggagttgaacgacaatttctgggaggagctgctgaacgaagggcttgttggtgaggagaacgacaacccggtcgtcgaggacgacatgaatgtgttgtcggagaagatgggttacctcaactcaaatggcccaacggctggggaatag</cdnaseq>

Protein Sequence

<aaseq>MDDPMLNAVKEEESHGDGGGLEVVAGEDGAAAVAAGVAPRPMEG LHDAGPPPFLTKTYDMVDDAGTDAAVSWSATSNSFVVWDPHAFATVLLPRFFKHNNFS SFVRQLNTYGFRKVDPDRWEFANENFLRGQRHLLKNIKRRKPPSHTASNQQSLGPYLE VGHFGYDAEIDRLKRDKQLLMAEVVKLRQEQQNTKANLKAMEDRLQGTEQRQQQMMAF LARVMKNPEFLKQLMSQNEMRKELQDAISKKRRRRIDQGPEVDDVGTSSSIEQESPAL FDPQESVEFLIDGIPSDLENSAMDAGGLVEPQDFDVGASEQQQIGPQGELNDNFWEEL LNEGLVGEENDNPVVEDDMNVLSEKMGYLNSNGPTAGE</aaseq>

Gene Sequence

<dnaseqindica>501..833#2157..2942#agtagcattcaccttctccgccctcccccctccgccgcctccgccgctcccccaccttccagaaccttcctttcccgaaatagccacccctaccctaccctaccctacccacccccgccaagatccccgccgccggcgagctcgagcccttggtggtgctccggcgggcgttgtcgcggtcggatcagctgctgctggtgctggtgatgccgctctctctttcttgcgtgtacttccgggtgggaggttgatggcgatggtgaggtgttctttggcgcggttgccctcgcccccactcttatctcctctcctcgcccatgctacctaccttcctcccccgccggagctgctctgctgctcgtactagcgtgggagctgcctcttcttgttgagccatttcttgcctacaaggacagggtgcctcgccgtcgccattgccggcgtcggagccggacaaggaggttcagtgtactgtaccgtggttttgggccttctgagctatggatgatccaatgctgaatgcggtgaaggaggaggagagccacggggacggaggagggttggaggtggtggcgggagaggatggggcggcggcggtggcggcgggggtggcgccgaggccgatggaggggctgcacgacgccgggccgccgccgttcctgaccaagacgtacgacatggtggacgacgccggcaccgacgccgccgtgtcgtggagcgcgacgagcaacagcttcgtggtgtgggatccccacgccttcgccaccgtcttgctccccaggttcttcaagcacaacaacttctccagcttcgtcaggcagctcaacacctatgtaagcccatagccacagctccctccccctccctctatattttgtcctgcaatgcacttgtttgcaacctggttcagttcttgatgtttcgccgctagcgccgatgaatgtagctgaaattgttcttgttcttggttgttggaacaacccccacaattgcagtataaactatatgttgtggagtaataagttggtgtaaccatccaaattgaattgtcatttgtggtcattcaaagtttaacagaggaaattagttaggcatttaaggttgccgggttcttttcagttgttatggttgaatagtagggatctcagatcttttttggtgataaggatatttaatctctgggaaacacttactatgtctcatgatatttcatcagagaagcgaactaacttacacaagcgcatataaacatctatttagagtttttgtttttaaaagcacaaagaaatcctagatttgacatacttctgtggaataacaagcaacgtatggacaaatgatagttgaatggcagttgtcctagatctgaaaatttggacttttctcatttttgttgggccactgtcataattgtaagaaaaaggctgttaacagaaacaaaagtcgctcaggggaaatgattcgatgtttgtttggatggatgcagcattgccctacctgcatgtgctgtagtactgtatttcaggtcttcatatctggactccatttcccaaagtaatggagatccattttcatgctgtgcctggtgtccccatcctttgaaccttttttttgggcatgttacggttgtgtaccaacatcttttatgctatgcgtcaccgtcaactacttgaacttcatataagcatcacgttgggctatttttaaatagtgtaaataagatcaatatgtttatgttttttaataaatatcctcaattcttatgctagagttgatagttaacttgtgccctctggaatggggcaacagatgactgaatttgtaatttgccccaacttatgaaatcgatgaagattgaaggagaaacttgatgaatttagtgcagaaagaactgaaaactgcacaaactgaaaccttgcaaattgaactgaaacgcattccagaaaggtacacaaaagatacttcttgtagcttcatctttgttggtactgctgcaacttgtgatcttaacaaaaaagcaaaaaaaaaaaagtgagagagaagtattagtgtgtaattctccccctaccaagaaagaagtagcatcctgttgcatacttgtctaagatgtctcttgcaactaacatttccctgaagaattgtttgtttgttttcagggtttcagaaaggtggatcctgatcggtgggaatttgcaaatgagaattttctgcggggacagagacatcttctcaagaacatcaagcgtagaaaaccaccttcccatactgcttcaaaccagcaatcccttgggccataccttgaggtgggccactttggatatgatgctgagatagaccggctgaagagagacaagcaattattgatggctgaggtggtgaagctaaggcaggagcagcagaatacaaaggcaaatctgaaagccatggaggataggctgcaaggaaccgagcagaggcaacagcagatgatggcattcttggcgcgtgtcatgaaaaatcctgagttcttaaaacaacttatgtcccagaatgagatgagaaaggagctccaagatgccatttcaaagaaaagaaggcgtcgcatagatcagggacctgaagttgacgacgtcggcactagcagtagcatagagcaagagtcaccggccttgtttgatccccaggagtcggtggaattcctcatcgatgggattccctccgatcttgaaaactcagctatggatgctggaggtctggtggagccacaggatttcgatgtcggcgcctccgaacagcagcagatcgggccccagggggagttgaacgacaatttctgggaggagctgctgaacgaagggcttgttggtgaggagaacgacaacccggtcgtcgaggacgacatgaatgtgttgtcggagaagatgggttacctcaactcaaatggcccaacggctggggaatagctaatttcattcaaattataccacattgctgtcagctttcgccatgtgaatttaactgaattttagttgaatttctgcttgctactggcatgcctccctccctgtgttactgaccgtagtgatttgttcgttgttaggccatatagcctgccagtcatgtaaaatgagtaaaggtgttgatgatccacaaatgttctgttccgtgttgtcagatggtctgcctgtatttgtagtcgtgcttagtgtgtgcaatgttgtaatgatatctaatattaatctgtacttctcgtaatgacatctgatcttaatctgattgcagaagtgctttgaattgc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0178600, RefSeq:Os07g0178600