Os07g0178800

From RiceWiki
Revision as of 08:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0178800| Description = Similar to Low molecular mass early light-inducible protein HV90, chloroplast precursor (ELIP)| Version = NM_00106556...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0178800

Description

Similar to Low molecular mass early light-inducible protein HV90, chloroplast precursor (ELIP)

Version

NM_001065565.1 GI:115470862 GeneID:4342552

Length

878 bp

Definition

Oryza sativa Japonica Group Os07g0178800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:4178089..4178966

Sequence Coding Region

4178161..4178295,4178391..4178834

Expression

GEO Profiles:Os07g0178800

Genome Context

<gbrowseImage1> name=NC_008400:4178089..4178966 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:4178089..4178966 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccgctaccatggcgctgagcagctccttcgccgccgtcgcagccgccgctggtggcgcgccatggcgcgccgcggtacgcttcccgcctcgccggcgtgttgcgctcgtcgtcagggcccaggccgagccggaggtggagccgacgaaggaggagacggctacgtcgtcgtcaccgactccgagccccgcggcggcggcgcccagggcgaagccggcggcgagcacggggctgtgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatggtggggttcgtgtcggcgctcgccgtggaggcgtcgcggggcggcgggctcctggagcaggccggcagcggggacgggctcgcgtggttcgccgccaccgccaccgtgctctccgcggcgtcgctggtgccgctgctccgcggcgagagcgcggaggcgaggagcggcggcgtgatgagcgccgacgccgagctctggaacggccgcttcgccatgctcggcctcgtcgccctcgccttcaccgagttcctcaccggctcgcccttcgtcaacgtctaa</cdnaseq>

Protein Sequence

<aaseq>MAAATMALSSSFAAVAAAAGGAPWRAAVRFPPRRRVALVVRAQA EPEVEPTKEETATSSSPTPSPAAAAPRAKPAASTGLWDVLAFSGPAPERINGRLAMVG FVSALAVEASRGGGLLEQAGSGDGLAWFAATATVLSAASLVPLLRGESAEARSGGVMS ADAELWNGRFAMLGLVALAFTEFLTGSPFVNV</aaseq>

Gene Sequence

<dnaseqindica>73..207#303..746#cattctagctttgctcgcctgagttctttgcttgtcctcactagcggtgtttgacagtttgagttgttagcaatggcggccgctaccatggcgctgagcagctccttcgccgccgtcgcagccgccgctggtggcgcgccatggcgcgccgcggtacgcttcccgcctcgccggcgtgttgcgctcgtcgtcagggcccaggccgaggtgagctgagcgttcttgattggtttcactgtgcgtgttctctggtgatttgcttcgcgtgctaacttggggcgacgtcgtcgttcgatctgcagccggaggtggagccgacgaaggaggagacggctacgtcgtcgtcaccgactccgagccccgcggcggcggcgcccagggcgaagccggcggcgagcacggggctgtgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatggtggggttcgtgtcggcgctcgccgtggaggcgtcgcggggcggcgggctcctggagcaggccggcagcggggacgggctcgcgtggttcgccgccaccgccaccgtgctctccgcggcgtcgctggtgccgctgctccgcggcgagagcgcggaggcgaggagcggcggcgtgatgagcgccgacgccgagctctggaacggccgcttcgccatgctcggcctcgtcgccctcgccttcaccgagttcctcaccggctcgcccttcgtcaacgtctaattaatcaattcaattaaattaattaagctgtgtacaagtacagtatgtatatactgggtagctagctagggttgtgtttgtgtgtgtatacattgtagcaagtagcaagcttatagtgcttggtgtactacc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0178800, RefSeq:Os07g0178800