Os07g0179000

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Revision as of 08:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0179000| Description = Protein prenyltransferase domain containing protein| Version = NM_001065567.1 GI:115470866 GeneID:4342554| Length = ...")
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Gene Name

Os07g0179000

Description

Protein prenyltransferase domain containing protein

Version

NM_001065567.1 GI:115470866 GeneID:4342554

Length

5991 bp

Definition

Oryza sativa Japonica Group Os07g0179000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:4188378..4194368

Sequence Coding Region

4188387..4190570

Expression

GEO Profiles:Os07g0179000

Genome Context

<gbrowseImage1> name=NC_008400:4188378..4194368 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:4188378..4194368 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcgccgccgccggagcgggcgccggcggcggaggctcgccggcgcaggacgacggtgtaccacggccaccgccgaccgtctccgcaccgccccaccgtccgaggcggcgtattctccgacctccgcgccaccaccgccgcctcctcccaaccgaggcctccctcctcctcctcctcctccgccccattccgcctcgccgactgggacccctcctcctcctcctcctccacgccttctccttccgccaccgcggccgcccgccgcctctccccgctcgcgcggttcctcctcgacgcgctccaccgccaccagcgctggggcccgcccgtcgtcgcggaactcaccaagctccgccgcgtggcccccgagctcgtcgccgaggtcctcagcgctcgcccgccgccgcccccgccgctcgcgctcccgttcttcctgtgggcgggacggcagaagggcttccgccactgcttcccggcgttccacgcgctcgcctcgctcctctccgccgctgggctccccgccgcggccgaccagcttcccgacctcatgcgagcccatggcaagccggtctcgcattcccagctcaacctcctcgtcaggctccacaccggcgcgcgtcgcccgctccgcgcgctccacgccctccgccgcttccgccacgagttctccgtgcagcctgaggtccacgcctgcaaccgcgtgctgggagcgctggctgcggctgggcatgttgatgataccctcaagctgttcgacgaaatgtcgcactgcagtgtgcggcctatgccggtgacattcgcgatcatggtgcgtgcgctggcgcgggcggggatgacggataaactcctggagatgattgggaggatgcgggctgaggtgtgcagaccggatgtgtttgtgtacaccgcactggtgaagacgatggttcgctgggggcatatggagggttgcatcagggtttgggaggagataagaagggatcatgtggatccagatacaatggcttacaccacaatgatagctgggctatgcaatgcgggaatggtggagaaggcagaagaattgtttggggagatgaggaggaagggtttgctggtggacaggatggtgtatgcgtctctcattgatgggtatgtctccacaggaagggtcagcgatggttgtagagtgttgaaagagatggtggatgctggttaccgtgcagacctggggatctataacacactgattggcgggctatgtgagatagagcgggaggataaagcacacaagatgtttcagattgtcgttcaggaggatctaataccaagctccgagactgtttcaccattgctggctcgttatgccgataagggcgagatggttaagttttttggattggttgataaactagtggagctaagcttgcctatagttgaaattttagtggacttcctgaagctctttgcatgcaagagtggcaatgaattgaaggctgtggaagtttttaatgctttcagaagaagggggcattatagtgttggcatttataacattctcattgagaatctgctgaagatcaaggagaggaagaaagcacttgtgttgttcgaggaaatgcaaagttcagatgactgcaagccggactcatgtacatatagccatatgatcccatgttttgtggacgaaggaaatattgaagaggcttgctcgtgctacaacttgatgatgaaggcagtttggataccaagcatttcagcctattgtgctcttgtgaaagggttgtgcaaaaaaggagagataaatgcagctatttcacttgttaaggattgtcttgggaatgtggaaaatgggccaatggaattcaagtacaccttgactattcttgaagcttgccaatcaaaaagcccagagaaggtcatcaaagtggtggacgaaatgattgagttaggttattccatagaagaaattatatattctgctattatttatggtttctgcaagtatgcaagttcaactgaggcaagaaaagtactatctaccatgagagatcgcaatattatttcagaagccaattatattgtttatgaggatatgttgaatgagcatttgaagaatgtcactgcagatttggtgatatctggattgaaatttttggatcttgaatctaaattaaaatggagaagcagagatgattga</cdnaseq>

Protein Sequence

<aaseq>MASPPPERAPAAEARRRRTTVYHGHRRPSPHRPTVRGGVFSDLR ATTAASSQPRPPSSSSSSAPFRLADWDPSSSSSSTPSPSATAAARRLSPLARFLLDAL HRHQRWGPPVVAELTKLRRVAPELVAEVLSARPPPPPPLALPFFLWAGRQKGFRHCFP AFHALASLLSAAGLPAAADQLPDLMRAHGKPVSHSQLNLLVRLHTGARRPLRALHALR RFRHEFSVQPEVHACNRVLGALAAAGHVDDTLKLFDEMSHCSVRPMPVTFAIMVRALA RAGMTDKLLEMIGRMRAEVCRPDVFVYTALVKTMVRWGHMEGCIRVWEEIRRDHVDPD TMAYTTMIAGLCNAGMVEKAEELFGEMRRKGLLVDRMVYASLIDGYVSTGRVSDGCRV LKEMVDAGYRADLGIYNTLIGGLCEIEREDKAHKMFQIVVQEDLIPSSETVSPLLARY ADKGEMVKFFGLVDKLVELSLPIVEILVDFLKLFACKSGNELKAVEVFNAFRRRGHYS VGIYNILIENLLKIKERKKALVLFEEMQSSDDCKPDSCTYSHMIPCFVDEGNIEEACS CYNLMMKAVWIPSISAYCALVKGLCKKGEINAAISLVKDCLGNVENGPMEFKYTLTIL EACQSKSPEKVIKVVDEMIELGYSIEEIIYSAIIYGFCKYASSTEARKVLSTMRDRNI ISEANYIVYEDMLNEHLKNVTADLVISGLKFLDLESKLKWRSRDD</aaseq>

Gene Sequence

<dnaseqindica>10..2193#aaactcaccatggcctcgccgccgccggagcgggcgccggcggcggaggctcgccggcgcaggacgacggtgtaccacggccaccgccgaccgtctccgcaccgccccaccgtccgaggcggcgtattctccgacctccgcgccaccaccgccgcctcctcccaaccgaggcctccctcctcctcctcctcctccgccccattccgcctcgccgactgggacccctcctcctcctcctcctccacgccttctccttccgccaccgcggccgcccgccgcctctccccgctcgcgcggttcctcctcgacgcgctccaccgccaccagcgctggggcccgcccgtcgtcgcggaactcaccaagctccgccgcgtggcccccgagctcgtcgccgaggtcctcagcgctcgcccgccgccgcccccgccgctcgcgctcccgttcttcctgtgggcgggacggcagaagggcttccgccactgcttcccggcgttccacgcgctcgcctcgctcctctccgccgctgggctccccgccgcggccgaccagcttcccgacctcatgcgagcccatggcaagccggtctcgcattcccagctcaacctcctcgtcaggctccacaccggcgcgcgtcgcccgctccgcgcgctccacgccctccgccgcttccgccacgagttctccgtgcagcctgaggtccacgcctgcaaccgcgtgctgggagcgctggctgcggctgggcatgttgatgataccctcaagctgttcgacgaaatgtcgcactgcagtgtgcggcctatgccggtgacattcgcgatcatggtgcgtgcgctggcgcgggcggggatgacggataaactcctggagatgattgggaggatgcgggctgaggtgtgcagaccggatgtgtttgtgtacaccgcactggtgaagacgatggttcgctgggggcatatggagggttgcatcagggtttgggaggagataagaagggatcatgtggatccagatacaatggcttacaccacaatgatagctgggctatgcaatgcgggaatggtggagaaggcagaagaattgtttggggagatgaggaggaagggtttgctggtggacaggatggtgtatgcgtctctcattgatgggtatgtctccacaggaagggtcagcgatggttgtagagtgttgaaagagatggtggatgctggttaccgtgcagacctggggatctataacacactgattggcgggctatgtgagatagagcgggaggataaagcacacaagatgtttcagattgtcgttcaggaggatctaataccaagctccgagactgtttcaccattgctggctcgttatgccgataagggcgagatggttaagttttttggattggttgataaactagtggagctaagcttgcctatagttgaaattttagtggacttcctgaagctctttgcatgcaagagtggcaatgaattgaaggctgtggaagtttttaatgctttcagaagaagggggcattatagtgttggcatttataacattctcattgagaatctgctgaagatcaaggagaggaagaaagcacttgtgttgttcgaggaaatgcaaagttcagatgactgcaagccggactcatgtacatatagccatatgatcccatgttttgtggacgaaggaaatattgaagaggcttgctcgtgctacaacttgatgatgaaggcagtttggataccaagcatttcagcctattgtgctcttgtgaaagggttgtgcaaaaaaggagagataaatgcagctatttcacttgttaaggattgtcttgggaatgtggaaaatgggccaatggaattcaagtacaccttgactattcttgaagcttgccaatcaaaaagcccagagaaggtcatcaaagtggtggacgaaatgattgagttaggttattccatagaagaaattatatattctgctattatttatggtttctgcaagtatgcaagttcaactgaggcaagaaaagtactatctaccatgagagatcgcaatattatttcagaagccaattatattgtttatgaggatatgttgaatgagcatttgaagaatgtcactgcagatttggtgatatctggattgaaatttttggatcttgaatctaaattaaaatggagaagcagagatgattgagaaatctttgtacagttgctacatactaggtacaacctgcttcacttcacttgtgatttgtgctatttagatattgtattatgtgttacctcttgtgagttgaacattgcattatgtaataaatagtcctaaacacttctagggatctcataacctggttattccatggtatgtttagctagagttgatatccatgggcctctggtttgtaccaaattatggataattcatacttcatactgatcctgatcatttttctcaagtattttttttaagaaaacacaaatctggtattccaccaaaaaagtcaacatgtgggagtggacgtggatgagtttgggaacccttgttgtgcttatccctccatagatttatcatgagaaaatttaatgatactgtagtatgtagaacataagtatgtatgttacttgacagacagttatttggaaaattcatgcctgcataatgttgtgtaaattcatgcctgcataatgttgtgggcatataggagatattgagtaaccaatgatggttctcacagactcacacagtcacactaacgaatgggcctgatcactttacattattggtgacattatgcagagaaagtaggtaaaggtagaagtatacaagttctctaatgagcaacgacggcactacagatgaatgagccttacagcataggtgttttttgtttacacaatttggaggaacaagcagtgtatacaaccagttccttctgagtttgtagtttgagcaggccaacttggtctgaggcatgttagaacttagaaagatgtgagttgcaagctgagaaaatatgatttgagtactgattagctaacctcaagcagcttggttcttgccctcccatatcaagtcccgatgcttaataaaaacagagtgcatggtttcctgccgtttaacattcattgtttatttatcttcaatttacgagctggtgttgagagcctgaactaatggactaattttgtgagtcaactcttccatgatatgtcctccgttttagtatttaggattcgactggaccatttatgcaaacacacaacactgacacctatgtccccagttggccagtcacttggttaatggttacataaatccatgcacacccttgcttgtagctaagtattatttcattttacttttaaattcaagattgccaatcttttgtgtaattgctaatagcagtactgtattttgacatagcagagataattaaagcaattttcatcgttttgttttatcatgtctcaatattttatgcatgtatggtaaatggtaatgtgccttcatccctgtatcctactacatatgttgtaccattagcaagttaaagaaacacgcacaccaaaaaaaaaaaactgactcggtccctatatatgggcaagtggtactcaaatgaagtagtatatcagtcccaacttctttcaggacggtaatgatagcgtttcattttactggggagctgattcttatcagtgacatgacactgttgaatctttaaagggtgtggaatctggatcgcttcctctctacattcctttaaggtacacactaccaatcgtgcaataggatctgcaagtattgttataattaggtatctgctccttattaccatgttaaacctcagtaacttgatcaggtttcttcttcacaaccacccctggagaactagcttccttagatgaggtgaaaaagccaatccagccaactggtcgtacaagtgagatccatctggtgcagcctggaaggttgatggcttgatacagaggtaaactagcattaattcttatagttaatcttttcagcagtactccgttattctgtcatctaccctatagttcaccaacacagtgttacattcatcattcctcattgatcggtcaggatcgtctcccacagatccgatgccccaggtcgctcccacctccctcacggcctcaccccatcaatcatgcgtcacaaaatgtgctctagcgagagatcattagactagaatagttcatttcggtcatggaactgtacttcaccttctatgttacagtggtactttgattatcaattccatttggtactcatgccgatccagatttggtgcttatcattttcatttggtactcatgcttcaataattcttgctttgatgaattgttgctgatccacatctttcatgattaatgtaacatagtctgtagtagcagtttaaaactgaatcagtagcagtttaaaattggaaccaagcgcattctccatgggatgccttaaatgactgattagtgcatgaagtaggcttaaattgcagtcaaaatcagtataatgcgttagaagcagatgatttctagatactttatttaaggccactattacagtttaaaccatataaactaataggaaaccatttgctctgagttgccatgtcttataagaatgcgttgctgtgagatgctccggaaaaaaaatctttaacctttcggcataatatatttttaactgaaatactttacacatgcattagttatgtcctctaagatcatgaaattcagtttattactgtccatttatgaatattccaactattttgccagatgatgaaaagcagcttgaggttttgaatctatgcaagtttgttcttactgttctgatggtacaccttatttcaggtacctaaaattgtccttttattcagtagtcctttcattaggtcaataagctccttttttgtgttgccactgagtgtccttcatttgttgttagagactacagtccgaaatttctgattatttaggcagttagaagtcccgagcagcggcaaccgggtctcgcccagcctccgctcccaagctttgagatttgagaatcccgggtaggggcagtggaagccgagggtgccaccatccataaatttctgtctgtaaattatcacactttttaggactaaaacttcggtattgtgaaggaaaacaagaaatgatatttattttatgccattctttaaattttggtatctaatatgaagcttaaaaaacacgtgcgtgatgtattttaaattgtataatctatattatcatatattgttgtcatagcgttagcacgagcatattactagtcttaataaattcatgacatgatcttccctcttctgaatatgtagtttttctttctttctttccttttcttttttcttacttcaagagataaattgtaggagtcagcattacattgcgtctcgtcatcaatgatatgtattcaacccgtagatgcgcatgtcttgtgtttttgcaatcctattccaagtcgatcaataactgcctaataagaaaccaatagataggccaatcatagtgctatttagccatcgctgtgatataattataaattatgctttcttgttgcttgtctgctttgcactgcaattaagatgtcattgttggaacagaaacttgtttgccggggcacacaataatttagatatgaaaaaaaaaacatgtgtcttgtcttgttctttgcagtgtgatttcatttcaattcgccgactatatatttcctgaagccaagaggggcaatcaggcgcatgccagacatgggcataactgttggcatatggcgttaggtataaccgttaatgcatcctgacgccgacgggttgctgtggatgtctgtgtacattcctcttgattgtcaccaattattttccagcatggggcgtcctgatgtgtaagtggctgcattgatcgttgatgcatgcatggactttgttttgtagtgttggataaa</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0179000, RefSeq:Os07g0179000