Os07g0179600

From RiceWiki
Revision as of 08:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0179600| Description = Protein of unknown function DUF239, plant domain containing protein| Version = NM_001188150.1 GI:297725430 GeneID:926...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0179600

Description

Protein of unknown function DUF239, plant domain containing protein

Version

NM_001188150.1 GI:297725430 GeneID:9267926

Length

4754 bp

Definition

Oryza sativa Japonica Group Os07g0179600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:4228567..4233320

Sequence Coding Region

4228567..4228852,4229549..4229610,4232070..4232243,4232434..4232484,4232602..4232745
,4232979..4233320

Expression

GEO Profiles:Os07g0179600

Genome Context

<gbrowseImage1> name=NC_008400:4228567..4233320 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:4228567..4233320 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggccgccctgggccgggacacggctatatatggaagtggacaccgtggtgtctatggcttccataggcattatcgtgacggttggagaggtgatcaccatggtgggcatggacaggaacacatcatctctcacattggtttcctcccgccgctgccgccaccacattatcctttgtcggagtttctgccgccgccgtacttcggcgcataccatgaaccaactatcggatacgcaccccacagcgaatactatggatcaatggtcagccatgcacacccagccctcctcgtggtcgccatcgtcgccgtcgtcgtcaccgccttccaccgtgaattatcactgtttgcagcatatggatcgattccttcagacgacgctatcaagtattacggattagaggccaccatggacatttatggctttaatctagagcatggacaacaaaccggaggtttcatttggatttacaatacggatgaagcatctgccgtgaataaagttatagctggatggaatgttgagcctgaatcgtacaatgattcacagacgcacttcagtacttggtttattgaaggttctaatgtttgtcctgatatgcgttgtcctggattcgaaagtgtatttagctcagaaatcgttcctggaatggtgattagccctgtttccaccacctctggcaagaaacaatacattacagtcagagtatccaaggatcaaaattccggtgattggcaaatctactatggctttaatggggatgccaagcttgcaggttactatccaagatctctgtttacaagcttgtcagataaaccagtgacaatattgtttggtggctatgccttgagaaaggatcaaaagccaagtcctccaatgggcagcgggaatgccccgtttaaaaacgccgcatcatttcgtagtatcaagttttttgatgccggtggcaacgcccatccaatcgattttcgtctcggatttatatcaaattgttacactatttctgttattgaaaatgatgggttcttttatgggggacctggcaatatttgctag</cdnaseq>

Protein Sequence

<aaseq>MVAALGRDTAIYGSGHRGVYGFHRHYRDGWRGDHHGGHGQEHII SHIGFLPPLPPPHYPLSEFLPPPYFGAYHEPTIGYAPHSEYYGSMVSHAHPALLVVAI VAVVVTAFHRELSLFAAYGSIPSDDAIKYYGLEATMDIYGFNLEHGQQTGGFIWIYNT DEASAVNKVIAGWNVEPESYNDSQTHFSTWFIEGSNVCPDMRCPGFESVFSSEIVPGM VISPVSTTSGKKQYITVRVSKDQNSGDWQIYYGFNGDAKLAGYYPRSLFTSLSDKPVT ILFGGYALRKDQKPSPPMGSGNAPFKNAASFRSIKFFDAGGNAHPIDFRLGFISNCYT ISVIENDGFFYGGPGNIC</aaseq>

Gene Sequence

<dnaseqindica>1..286#983..1044#3504..3677#3868..3918#4036..4179#4413..4754#atggtggccgccctgggccgggacacggctatatatggaagtggacaccgtggtgtctatggcttccataggcattatcgtgacggttggagaggtgatcaccatggtgggcatggacaggaacacatcatctctcacattggtttcctcccgccgctgccgccaccacattatcctttgtcggagtttctgccgccgccgtacttcggcgcataccatgaaccaactatcggatacgcaccccacagcgaatactatggatcaatggtcagccatgcacacccaggtatgtgagataaggaacacatcctctaccttaaaagataggtgactgagtcgcttacatgtgagaccactctactataggatcacatgtcagtgactcaaagtcatgtgacctaatagcagaggatccaatttggttagatatactaaaagttaagtttggtgaattgttatttaaaaaaatatatattgatattcagttatacataccctatatgggacacaccataagtttggtgcattctttcttttatttatttatactgattttctttgttatatgtaggagaagtttggtgtatttttttttaaaaaaaattatactgactttctttgtgatatgcaggatttgcctctccagattaaacaagcaacttctagattgggattaagccccaactcatctgttcgtccaatccaattcacgcaagaaatctatacctacttaaaaaatacttaaggcttccgatcgtccgcttcgtccgtcgtcgtcgtttgagtctgagcccgtctttaaaaaaaatccccttgcagatcagccgattgctcccaacccctttgcccccaattcccaaaatacatgaatgacaaaatcactcaattgcaatcccaaatccaaaccaagaatccccacaaaatcaacatcccaaatcaaaaataaaatccaaaccctaaccctagccgtctcccggagcagccctcctcgtggtcgccatcgtcgccgtcgtcgtcaccgccttccaccgtgaattatcactggtaattgtaatttctgaaaaagattgatctgatggtatcatggtaatgctcatgcttctgctaaattgatttgtttgtttatcttttgttttgttttattttttaatttttttttgtcttttgtttgagagacaagaggaagtgaatacagtctgtgtgtcactccttggtctctctccccctgccttattcggtcgttcatatctccttatttttattttttggcagaaaaaaagagaaataagttaagttccatgaagatataattataccttttgggtgaggaaacccgggcaaatattcatggatttgttctcaaaagattatgagtaaccatttggctactttttttatagttatgaaaattgatatgaagacttgtggttgacctatcttagttcttgcaaggctcatatgttcaaggtattctatattaagatttgtaataaaatacataaaaaaatacacattacttgtgctagtctgctaatttcttacttcctccatcccaaatatagcaacgaaggactagatgtgatatattatagtacaacgaatctggatatatctgtccaaattcgaatatggatatatatatatatatatatatatatatatatatatatgtatgtatgtccaaattcattgtattaggatgagtcacacccagtcataggttgctatattttgaaccgagagtacaaattagtactttctccatcctaaaaattttagtactaattagtactaaatatatcctaattactacttccttcatattcttataagttatatcaaatatgatattatttgatactatgttgctatatttcaggacggatagagtatttgatttattggaaaagccaaaaacaaaattataccaaatggccatagattttatccctttgcaagccaaagcgagctgagtttatccatgtcatgataactttgctgagttggagatgatgtgttctatacggtcttctacggttgcacgtgcatacacacttatttgtcgtattttaggacatacactagagcaaagcatatctttcgaatgttcgtgtgttttatcagatttagcatcaacagttatctacaagattttttttatataaaattacgtcttttacaatattaatttaaagaaaaatacttacagtgcatgcgtaagactaatcgatccaatggggtcatgcgctcatttatattgatattattttattgtacctgttttggtattagagtttacttattccaaatctagccaaatgtggggcctccgttctgataaagtaaatgtaatgcacctgggtgtttcctaacatcctgatcattggtagtataaattttacaatattattttttttttcaaaagaagattcaactccaataataaaattttagggttaatatgttagtataaatttcatgattttgaaatatatcattactattcaactatttgaaaccatgtcattataccccttcacttttttttttaattttcagtaccaaattgcagctgtcttcttattttatccccttcttccttcctagtctattttctataaatgtactgtaataaataaataaataaataatatatatatatatatatatatatatatatatatatatatatatatatatatcttcattaatgttcattgaattaaagatttggttttgttttctcattgaatttgaagatttcgttcagatttcggatttaataagttgaagatctttctgactcatctatataaagcggatgaaacaggctagcaaaagacacacaaaacacgatacctcttcccttccccacttctaacatggagaacgtttttactcaatctgcactactctgtgtgttgtttcttagtagttcaatagttggaggttgctctcctacaatggaagaagaggtacttctcttgagctatatatattgttataattcaaattcgattttattcaactgaaacatagaagtaatagctagtctatattgatttgttccccttttcccaaacaattaaccaggtccaaaagaattggcgaacattgatggcccctctacttcatgtgaatttctcttcatcggatcatatatcaactcaagctgacccagtatattatgtgagtgtcatatactccttccgtccaaatataaaacatagttagaaatttgttccaaaataatgcaactcatatcttcttacctatcatcgatgaataaatcgataaatttctttcaatatcccatcaccgtacctactaatataactttcctattaatttggggcattttggttctttgtctcctttcttaactccaccataggaagctaaaatttgagtttttttggggagtatgttttttttccctagatctaaaagatgcacttgtactcatgatcatgattttcatgaccaaatacgtactttggcagtttgcagcatatggatcgattccttcagacgacgctatcaagtattacggattagaggccaccatggacatttatggctttaatctagagcatggacaacaaaccggaggtttcatttggatttacaatacggatgaagcatctgccgtgaataaagttatagctggatggaatgtaagttaaacttatctgcttgatttggaattgtaatttcaagcctacattagcttagctggttgatgctcaacaggttcatgagcttctcactgtcaatcgaagatgtgtcactaaacaagttactttgattaatcatttgctccatgtcttttagttttaacatttagttgtattgtacctcatacaggttgagcctgaatcgtacaatgattcacagacgcacttcagtacttggtttgtaagtttcttcataaacactgcagtttcctatccatcaatttttatttttattttttttgccataataaagattttgtatttattatgtcataactcattctccaattaatgccagattgaaggttctaatgtttgtcctgatatgcgttgtcctggattcgaaagtgtatttagctcagaaatcgttcctggaatggtgattagccctgtttccaccacctctggcaagaaacaatacattacagtcagagtatccaaggtttaattattgtctaattaataacagaacaatcttacattccttttttttatcccttcatatataaaatggaaatagtataatgaatctggacatacccatgtctagcacaacgaatctagatatacctatgtccggattcgttatactaggatatgtcacattccatgctggttgagatattttagcacggagggagtatgcgtcatgacactatattttgatgatttcaggatcaaaattccggtgattggcaaatctactatggctttaatggggatgccaagcttgcaggttactatccaagatctctgtttacaagcttgtcagataaaccagtgacaatattgtttggtggctatgccttgagaaaggatcaaaagccaagtcctccaatgggcagcgggaatgccccgtttaaaaacgccgcatcatttcgtagtatcaagttttttgatgccggtggcaacgcccatccaatcgattttcgtctcggatttatatcaaattgttacactatttctgttattgaaaatgatgggttcttttatgggggacctggcaatatttgctag</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0179600, RefSeq:Os07g0179600