BGIOSGA008679

From RiceWiki
Revision as of 18:52, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA008679

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008679, complete gene.

LocusTag

OJ1626_B09.4

Ensembl Transcript ID

BGIOSGA008679-TA

Ensembl Protein ID

BGIOSGA008679-PA

Length

4128

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:27182780..27186907

Sequence Coding Region

27182780..27182820,27182920..27182996,27183874..27183938,27184048..27184094,27184788..27184863
,27185042..27185109,27185727..27185796,27186043..27186128,27186283..27186345
,27186417..27186482,27186859..27186907

Genome Context

<gbrowseImage1> name=IndicaChromosome02:27182780..27186907 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:27182780..27186907 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAGACAGCCAGTACTCCTTCTCCCTCACCACCTTCAGCCCGTCGGGGAAGCTGGTGCAGATCGAGCACGCGCTCACCGCGGTCGGATCCGGCCAGACGTCCCTCGGGATCAAAGCTGCTAATGGTGTAGTTATCGCCACTGAGAAGAAATTGCCTTCTATTTTAGTCGATGAAACATCTGTGCAAAAGATTCAGTCATTGACTCCGAACATTGGAGTTGTCTACAGTGGGATGGGTCCCGATTTCCGTGTTCTTGTGAGAAAAAGTCGGAAACAAGCACAGCAGTATTATCGGTTGTACAAGGAAACTATCCCTGTTACTCAGCTTGTCCGAGAAACTGCTGCTGTTATGCAGGAGTTCACACAATCTGGTGGTGTAAGACCATTTGGAGTATCATTATTGATTGCCGGGTACGATGACAATGGCCCACAGCTGTATCAGGTTGATCCCTCAGGATCATACTTCTCCTGGAAAGCATCAGCTATGGGGAAAAATGTCTCCAATGCAAAGACATTTCTTGAAAAAAGATACACAGAAGACATGGAGCTTGATGATGCCATCCATACTGCTATTTTGACTCTGAAAGAAGGATATGAGGGTCAAATCTCAGCCAACAATATTGAAATTGGAGTTATTCGATCTGACCGTGAATTCAAAGTTCTAACCCCGGCAGAGATCAAGGATTTCTTGGAAGAGGTGGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQISANNIEIGVIRSDREFKVLTPAEIKDFLEEVE</aaseq>

Gene Sequence

<dnaseqindica>1..41#141..217#1095..1159#1269..1315#2009..2084#2263..2330#2948..3017#3264..3349#3504..3566#3638..3703#4080..4128#ATGGGAGACAGCCAGTACTCCTTCTCCCTCACCACCTTCAGGTATGTGCTGCCTTGCGCCTCCCTCGCCCGGAGATCGGGCGTGATCTGGTGCGGTTTCGGTTTCGTCATCTGTGGTTTTTGTGGCGATTTCGTTTGCAGCCCGTCGGGGAAGCTGGTGCAGATCGAGCACGCGCTCACCGCGGTCGGATCCGGCCAGACGTCCCTCGGGATCAAAGGTGCGTCCCGTGAAGCAATCCCTTCTCTATACTTCTATTGCGTTATGAGAATCGAGAAGGGGAGGGGAGGTTTGAGATTTTGGCTGGTTCGGTTCACATGACGAAGTGGCGCTTGTTGGGGATTTTGCACTTTTCGCATAACTTTTATTCGTTGCTACGGCTTAGGTTACTAATAGGTGCCATGTTACTTGCATCTGCTATTCTGCTTTAGTGATACTTGGGAATTTTGTAATGTTTGCTTCGTTTTCGCTTACAAATGCTTGTGGATGCCATGGAAAATCATTATTAATCTACATAAATGTATGTCTTGTAACAGCAATGGCAAGTGCTCCCCTTTATAACCACATAAGAAATACAAGCTGCTTGGTTTCATCTGTGATGATGAAGTTTTCTATGCCAATTTACGGCGCTGAATGTATATGCTGACCTAGTTTTCCCATTAGTAGTTGTATGTGTGTGCAGTCTGATCTAGTGCCTATTAGGGTTTGGAAGCCCATTTTAGTATCAGTGCAAAATTCTAATTTGTTTGCCCTGTCAACGTCCACCTTACTGGTAGGTTTACATACCCTTAAAATCAGCTTTTGTTGCCACTTGTCAGTATTTATGCAATTTAAAGTCTTGGGGTTTTAGCCCATGAATTTTGTTTTGGTATATAAAAAATTGAAAGAAACTATTTGACATGCGTTCTTCACGCTGATAGATGTAATTGTTGTATGTAATAAATTTGTGGTGTAGAACATACTGCATATGTTTTTACCAGATTGTTCTATCATATGTTTTTGTGTAGTTACTGCTCAGAGACTACAGTCTGTTGATTCTCTTCAGTTCCCTTTTAGCCTAGTTTATTGATTCTGAGGTATATTTGTTATGTTTGCAGCTGCTAATGGTGTAGTTATCGCCACTGAGAAGAAATTGCCTTCTATTTTAGTCGATGAAACATCTGTAAGTCTAACATCGCTCTTAATGCTGAATTCCTCTTTTAGTGAGTTGCGACATGCTATTCGTTGTTTGTTTCTCAGAAGCACTAATACATAGTTATATGCAAATTCAGGTGCAAAAGATTCAGTCATTGACTCCGAACATTGGAGTTGTCTACAGGTAACCTTTTACATTGGCTTCATTGTTGGAATACATTTCTATTTTGTATATATTATGGTTGTCATGTACATGCTATTGTAAGTTATTCCAACTTGTTATTCTATTAGTTATGTTCTTGATCCTTTATATGAGCACTAGCTGTGCTGTAAGCTTCTACAATTTTAGCAGTACATAGTTCACAGATGAGCTATTGTGTAAGAATATAATGGTAATATAAATAATTGGTTTGAACCGCCTGGTTTTAGTGAACAAGTGACACAGTTCGCCCTGAGAAATTTGCACATATTAATCTTCCCTAAAAAGGCACAAATTAAAAATATCTATCTTGCTCTCCAAACTTTGCAAGAGGATAAGTGCATTGGTATTTTACTGTGTCTTATAGTTATATGCACATCAGATTGCAGTAACTTTGGAAATCCATATCTAGACATTTGAGGCAACTTGGTGAATGAGCATGCAGATCTCTGGATTTTTGTTGATTAGCTTGTAAGGTATTTATAGTTGATCTATTCACTGGACTAAAGCATAAAAAATAGTTCTTCAATCCATCTGCAGCCTTGTACAGTGGTCTGAGAGAACAGCTGCATTCTGTCTTTAAATTATTTGTTAGTTTGTTACATCTCTCAGCTTGCTGCTGTTAATATCAGTTGCAATTCAATAATACATGTTTACTTACCTGTGCACTTCTTTCAGTGGGATGGGTCCCGATTTCCGTGTTCTTGTGAGAAAAAGTCGGAAACAAGCACAGCAGTATTATCGGTTGTACAAGGTGGTTTTTTACAGTTCATTTGATTTATACTTCAGATAACTATTGTATGTTTTGTAAAGACATATATTTTTCAATAAATTGCTATTTCAGATAGCATGCAATTTTTCATGTACGACAGTCATGATCTTTTCCATCATTTACTTATTTCTCATGATTGTTCTTCCTTTTTCTAATGCAGGAAACTATCCCTGTTACTCAGCTTGTCCGAGAAACTGCTGCTGTTATGCAGGAGTTCACACAATCTGGGTATGCTACTTCAGAGTTTTCCATTTCTATCAATGATATTGTTAAATAATATATTCTTGCACTTGTTCGACCTAATTAATTTGTATGGATATATTTGTGGAATATTTTTACTATAACTTAACAGTACCATTCGTTCAATATTGTATTCGATAATTCAGATGTTCAGTACCGAAAACTTTCAACATGTACATCACATTGATGTGTGTTGATGCAGAAGCTTGTTAATTGACCTGCTGGGAAGAATATATATGATCTGCTGTGTGAACTTCCACTTGGATTTTCACTGGATGGATAAAATTTTATTGAAATTGGGCCATTGAGAATTAAATTGCTAATGTAACCAAGCAAGTTGGGTAGTTTCATACCTGTAACACATAGGATTTTCCAGTCATTTGCATTTTATAATTCACTTTGACATCATTGAAACAAAAAAGAAAAAAAACATCAGAGGAATAATTAAGACATACATCTTGTTATAAATCACATTACATGCTATGTGGTAGTTGGTTCTTATGTTGATTGGTGAATCCTGAAGTACAGTTCACTCCTTAAAGATATGAATATATGATGTAACCGAATTTCTGAGGCATGACTCACGGCCAACTTGTTTGTTGCAGTGGTGTAAGACCATTTGGAGTATCATTATTGATTGCCGGGTACGATGACAATGGCCCACAGCTGTATCAGGTATGCAGATAGCTGCGTTATAGGGGCTCTTTTTTGTTGCAACTGTTTCAAAATTAATGTGTACGTTGACCCTTGTCTCAATAATAAGCTGCAAAGTGTTGTTTGCACAAAGCATCTAATAGCAGATCACCACTATTAGTTGTGCTAGTTTTGTTCTTCTGGACTGAAATTTTACCTGTCAATTTGTCATATTTTGTTATGGTGTAAAATTGGTATAATGCCAGATGTGCTGTATTATTTCTACAGGTTGATCCCTCAGGATCATACTTCTCCTGGAAAGCATCAGCTATGGGGAAAAATGTCTCCAATGCAAAGACATTTCTTGAAAAAAGGTACATAGCATACCACTAATATTGTATTGTACTACACTCTGTTTTCCTCAATCTGATCAGAAATAAAGTGGATTTGTTTACGAGGATATCTTCTTTCCAAAGTTGTATGACTGCACTTGTACTGTTGTTCAACCTCTTTATGTCCTCATTTCAGATACACAGAAGACATGGAGCTTGATGATGCCATCCATACTGCTATTTTGACTCTGAAAGAAGGGTATGTCTTGTAGGTGCTTCTGTTTCTATTTCCAGAACATCCTGAGTTACTGACTGATTCGGGGGTTGCAGATATGAGGGTCAAATCTCAGCCAACAATATTGAAATTGGAGTTATTCGATCTGACCGTGAATTCAAGTATGTCATACAGACTTGATCAAGCTGTTTTTTACTGCCACGTATATGCAATGCAACTTCTGTCTTGTGAACATGCCATAACAATTTTTATCTGTTCCCTACCTTGTTCATCTTGACAGCTATGGGACTTTTAAATCTTCATTAATAGTCAAAGTTATAGTTCTCTTTTTCCATGTACACCCATGTTGGGTGTAGAGGCTGGGTTTTACCTATCCATCATTATCTTAAAGAAATTATAGTTCTCTCGGTCATGTAGTTGGTATAAGTAGTTTCAAAAGAATTTGTGTCATTTGTGCTTCTACTCAAAGCTGTTTGATTTGATTTTTCCCCCTCATTCAAGTGGTTGCTGACAAGTTACTTTCTGTACAAAATGCAGAGTTCTAACCCCGGCAGAGATCAAGGATTTCTTGGAAGAGGTGGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008679