BGIOSGA008703

From RiceWiki
Revision as of 18:52, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA008703

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008703, complete gene.

LocusTag

OJ1282_H11.6

Ensembl Transcript ID

BGIOSGA008703-TA

Ensembl Protein ID

BGIOSGA008703-PA

Length

3137

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:27609411..27612547

Sequence Coding Region

27609411..27609748,27609839..27609868,27610580..27610686,27611137..27611171,27611563..27611691
,27612356..27612547

Genome Context

<gbrowseImage1> name=IndicaChromosome02:27609411..27612547 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:27609411..27612547 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCTCCCCACCACCTCCCCCCTCGCCGCGGCCGCAGCGAGGCCCTGCGCGTTCCCGACGCCGTGGAGATGTCGCTCGCCCCCTCTTCGCCGCCTCCCGCACGTCTCCTGCCAGGCGAACCGAGGGGGTTCTCGGGACGGCAATTCGTTGAGCACCTCGGCGGCGGCGGCGGCGGCGTCGCCGCCGCCGAGGTGGCGTGCCGCGGTGTCCGCGGCGCTCGCGGCGGCGATTGTGTCCGCGGCGCCGGCCTACGCGGATCTTAACAAGTTCGAGGCGGAGCAGCGTGGGGAGTTCGGCATTGGCTCCGCTGCGCAGTTTGGGTCGGCCGACCTCAAGAAGGCCGTCCATGTTAATGAGAACTTCAGGCGGGCAAACTTCACTGCTGCTGATATGAGGGAGTCAAATTTCAGTGGTTCCACATTCAATGGTGCCTATCTTGAAAAGGCTGTTGCTTATAGAGCAAATTTTACTGGTGCAGATTTGAGTGATACCTTGATGGATCGCATGGTGCTCAATGAAGCTAACCTTACAAATGCTGTGCTTGTACGGTCAGTCCTTACGCGTAGCGATCTTGGTGGAGCAATCATTGAAGGTGCAGACTTCAGTGATGCTGTTATTGACCTGACACAGAAACAGGCTTTGTGCAAATATGCAAATGGAACAAACCCTTTAACAGGGGTCAGCACACGGAAAAGCCTTGGATGCGGCAACAGTCGCCGAAATGCATATGGGAGCCCTTCCTCCCCTCTTTTGAGTGCTCCACCACCCAAACTTCTGGACCGTGATGGTTTCTGCGATGAAGCAACTGGTATGTGTGACGCAAAATAA</cdnaseq>

Protein Sequence

<aaseq>MALPTTSPLAAAAARPCAFPTPWRCRSPPLRRLPHVSCQANRGGSRDGNSLSTSAAAAAASPPPRWRAAVSAALAAAIVSAAPAYADLNKFEAEQRGEFGIGSAAQFGSADLKKAVHVNENFRRANFTAADMRESNFSGSTFNGAYLEKAVAYRANFTGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLTQKQALCKYANGTNPLTGVSTRKSLGCGNSRRNAYGSPSSPLLSAPPPKLLDRDGFCDEATGMCDAK</aaseq>

Gene Sequence

<dnaseqindica>1..338#429..458#1170..1276#1727..1761#2153..2281#2946..3137#ATGGCTCTCCCCACCACCTCCCCCCTCGCCGCGGCCGCAGCGAGGCCCTGCGCGTTCCCGACGCCGTGGAGATGTCGCTCGCCCCCTCTTCGCCGCCTCCCGCACGTCTCCTGCCAGGCGAACCGAGGGGGTTCTCGGGACGGCAATTCGTTGAGCACCTCGGCGGCGGCGGCGGCGGCGTCGCCGCCGCCGAGGTGGCGTGCCGCGGTGTCCGCGGCGCTCGCGGCGGCGATTGTGTCCGCGGCGCCGGCCTACGCGGATCTTAACAAGTTCGAGGCGGAGCAGCGTGGGGAGTTCGGCATTGGCTCCGCTGCGCAGTTTGGGTCGGCCGACCTCAAGTACGTTACGCGGGCTCCTTTCCCCTTTCGGATCCTTTCGTTTTGCCTCGTGTCGCTGATATTCTTCGCCCCGTGCTTGTATCATTGCAGGAAGGCCGTCCATGTTAATGAGAACTTCAGGTTGGATGCCTAATTTCACAAATCCCAAATTAGTATTCTTTCGTGCTGCGGTGCTAAATGTTTGCTGCTTACCATAGGTTTTATGTAATAATTGAACCAAATGAATCCTGTGTTTCCAATTTCAGCTATAAACAGAAATTCCATTTGGTCTATGCCTGTTTGGGTTATAAAGTAATTTTGGTTCTCTGCAAGTGTTGATACAAACTTTTCTCTAGCTCATGCTTATGCTGTTATATCATCATCTTAGTATTCTGGATAGATAGACACAATCTCTGGAGTCCAGTGGGTTATGCATTTTTTTTCAAGCATTGATTCCATTGCAGGCTATAGATAAGACATAAAAGCTCTTGCAGTTTAAAGTTTGCTTAGTTAAGCAGTTTTACTATAGTACTATCATATTGGCATTTATTGCTTAACATATTGGCATTTATGTGGAGGGTGGAAGATTAAAATAGTAATATCGCAAAATAGTAATCAGCCACATAAAAAACAATCTGTAGATGAGCAGCCAATTTTGAATCTTTACCATCACTGCTTCAGCTTGGCATGGTTGTCCACCTTTAGCATATATTACAATTCTCTGCATATGAAAGATATATTGATATGCTTAATTAATAGGTTGGGTACCCTCAATTTCTGTTATGAATTTTCCCTATGGCTCAAGAAAGAGATCATTTTTTTTCCTTTTTAATACAACATTTATCAATATAGGCGGGCAAACTTCACTGCTGCTGATATGAGGGAGTCAAATTTCAGTGGTTCCACATTCAATGGTGCCTATCTTGAAAAGGCTGTTGCTTATAGAGCAAATTTTACTGGTAAGTGAAACAACATCTTTTCAGTATGTGGATGTGTCAAACTCCCTCCAAGAAGTTATTATACACTCATGCTTGATGCAAATAATTACCCCTGTTTTGTGCCTTTGTGGTTAGTAGTCCTGTACTCTAGTGATATGCCTTAACAGGGAGACACTGCACTAGAGATATCATAGAGAGCCCTTGTTTGAACTCCACTAAGTCCTTCCCAGTTTAAACTCTGATCAGGAGGCAAACAATAAACTTCATTTTCTTTTGTTCCAATTGGAACCAACATGGTACTTAGGTCTTTGTTATTGTTAGTGAAAGCAATTGCAGAAGTAGAGTCCTGCATCTGATTTTTCAAAATCCTTGTAACTTTTGACTGCATCTGAATGGTTACAGAATACTTCAACCTTCCCATGCAGTTATTTATGACACTATTTCACTGTACTATTGTTTGGTTTTTTGCAGGTGCAGATTTGAGTGATACCTTGATGGATCGCATGGTAAACCTACAACTTCTTTATGTCATGTTTTTCTTGTGCAAAGTATCTTCTGCAAATACATGTATATAGTTATGGACTTGTGATGCTCAAGGGCATATGGGTGATGCACTTAGTTGTGCAAATGCGGAATTTGACATCAGTGTGTTAAAAGAGATAATGCATCAGAATTCTTGATCAGAGTAGTAAATGATTCATATATTAGTTTTGGTGCTAAATGCTTATGAATGCATTGTTACTTTCAATATGAAGCCAGGTTCAATGTACCAGTTTTTAAGGCAACTACTGGAGTCTCCTGTTCTTAATTTACAACATCGTTTAGTTCTTCAGGAATAATAATTTCAAGGCAAAGTAACCTTTAAGCATGTATTGAAAGTTTGTATGTTATTGACAGGTGCTCAATGAAGCTAACCTTACAAATGCTGTGCTTGTACGGTCAGTCCTTACGCGTAGCGATCTTGGTGGAGCAATCATTGAAGGTGCAGACTTCAGTGATGCTGTTATTGACCTGACACAGAAACAGGTACATGAAACTTGAATGACACTACTATCACGTGTAGTAATTATCAAACTAAGGTTTATTTTTGCATGTTCCACGGGTCTGTTTGATAAGCAGTTGAGCATGTCAGATTCTAAAAATGTTCCTTTTATTTTTCTTCCACGGGTTTTTCTTCTTTGACGTGTTTGATAAGCAGTTGAGCATGTCAGATTCTAAAAATGTTCCTTTTATTATGGATGCTTGCTGTCTGATTTTGGTATTACTAATTTTTAAACACTGGCCAACGAACTGTGTATGGATGCAGAAGTAAGTGTCATGGAAGAGAAAACCGAATATTCAGACAAGAGAATCTTGACATGAACTTGACTATTATCTCCTGGCTGTTATGTCTCATGTCTTCGGGAAGGAAGTTCCATGTGCTCAACTGCTAACAACACAATCTTTAGCTTGAACAAACATTGCATAATCCTAATGTCCCGCATCTGTGACATATGAATTTGAAGTTGAGAACCGGTGCCATACTGTTTCAGCAGTGGTCAAAACTAATTTTGGATGATACATAAAAGAATCACCATATGATGCCATGTTGGGGTCTATCTTCAATGTTTTGCATGAGTTCTCTGATTCTCTTTTATACAGAAAACAAAAGATAATCCTGATAACTAATATTAGGCAAACTGGTATGTAGGCTTTGTGCAAATATGCAAATGGAACAAACCCTTTAACAGGGGTCAGCACACGGAAAAGCCTTGGATGCGGCAACAGTCGCCGAAATGCATATGGGAGCCCTTCCTCCCCTCTTTTGAGTGCTCCACCACCCAAACTTCTGGACCGTGATGGTTTCTGCGATGAAGCAACTGGTATGTGTGACGCAAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008703