Os07g0181100

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Revision as of 08:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0181100| Description = C4-dicarboxylate transporter/malic acid transport protein family protein| Version = NM_001065578.1 GI:115470888 GeneI...")
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Gene Name

Os07g0181100

Description

C4-dicarboxylate transporter/malic acid transport protein family protein

Version

NM_001065578.1 GI:115470888 GeneID:4342565

Length

3637 bp

Definition

Oryza sativa Japonica Group Os07g0181100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:4315798..4319434

Sequence Coding Region

4316895..4317053,4317491..4318024,4318124..4319305

Expression

GEO Profiles:Os07g0181100

Genome Context

<gbrowseImage1> name=NC_008400:4315798..4319434 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:4315798..4319434 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggttagcatcggcaagccagatgacgggcaatcgcttcttgctaatgttgaggcctccgatgaccatgccgcctttgatgccatggccacaagctcgcgccgtccacctagcttgcgccctctgcggcaccccaatgtgacatcccttgcaccattgccaccactccatcgctgtgtaccacgacaaaccgaggtgatattcccgccacttgactcaccggactcctccgagctgaagaaggttatgtccatcagcctgccagcaacaccaaccggctttgccgcacctgttgccggtgccagcgactcgtcgggcatagatctccggaggcaagccatggcgtcgaacatgacacaaaggctacagcagcgctcgccaacgtcgcagagcaacaacggccggcggctcacagacgagacaacagcgttccagtcacccccgcctacccccggtggcggccggtcgtcgatgagccgggacaaacgctatgattcattcaagacgtggtcggggagactcgagaggcagatcagccacctggcgggcatcgggccggacatcccttcacctgcagggcaagtcgtggatgccgccatggatagtcaccaccattctcacactgtgtccacgcccgaggttggccgcttctttgccgcactggaaggccccgaactagaccaactcaggtcggaggaggagctggtgctgccggtggataggacatggccattcctgctgcggttcccggtgtcggcgttcgggatctgccttgggatgggcagccaggcgatcctgtggaagaggatcgcggagtcgccgccgacgacgaggtacctgcacgtcgccgccgacgtgaacctcgtgctgtggtggctctccgtcgcgctcacctgcgccgtctccgccgtctacgcctgcaaggtggtcttcttcttcgaggccgtccgccgcgagtacctccacccggtcagggtgaacttcttcttcgcgccgctgatcgcctgcctcttcctcgccatcggcgtgccgcggtccgtcgcgccgtcgacggcggcgctcccggcgtggctctggtacgcgctcatggcgccgatgctgtgcctggagctcaagatctatgggcagtggatgtcgagcgggcagaggcggctgtccatggtggcgaacccgtcgaaccacctgtccgtcgtgggcaacttcgtcggcgcgctgctgggcgcgtccatggggatcagggagggcgccgtgttcttcttcgccgtcggcgtggcgcactacgtcgtgctgttcgtgacgctgtaccagcggctgccgacgaacgaggcgctgccgcgggagctgcacccggtgttcttcctcttcgtggcgacgccgagcgtggcgtccgtggcgtgggcggccatcgccggcgagttcgcgctcggcgcgaggctcgcctacttcgtcgccatgttcctgtacgcgtcgctcgccgcgcgcgccgtcagcctcttcggcggggtcaggttctcgctggcgtggtgggcgtacacgttcccgatgaccagcgccgccgccgccaccatccgctacgcggcggaggtggaggacacccgcctcgccagggcgctctgcgtcgcgctcgccgccgccgccacgctcaccgtcggctgcctcttcgccaccaccgtcgtgcacgccgtcgtgctccgcagcctcttccccaacgacgtcgccattgccatcaccgaccaccgcaaggtgaagcccaagcccaagcccaagaccaccatggaggtgcactacaagatggatggcaatggcgacatcgagggcggtgctcctgccatgacgccatcgccatgcatgccgatggcgacggcagcttag</cdnaseq>

Protein Sequence

<aaseq>MEVSIGKPDDGQSLLANVEASDDHAAFDAMATSSRRPPSLRPLR HPNVTSLAPLPPLHRCVPRQTEVIFPPLDSPDSSELKKVMSISLPATPTGFAAPVAGA SDSSGIDLRRQAMASNMTQRLQQRSPTSQSNNGRRLTDETTAFQSPPPTPGGGRSSMS RDKRYDSFKTWSGRLERQISHLAGIGPDIPSPAGQVVDAAMDSHHHSHTVSTPEVGRF FAALEGPELDQLRSEEELVLPVDRTWPFLLRFPVSAFGICLGMGSQAILWKRIAESPP TTRYLHVAADVNLVLWWLSVALTCAVSAVYACKVVFFFEAVRREYLHPVRVNFFFAPL IACLFLAIGVPRSVAPSTAALPAWLWYALMAPMLCLELKIYGQWMSSGQRRLSMVANP SNHLSVVGNFVGALLGASMGIREGAVFFFAVGVAHYVVLFVTLYQRLPTNEALPRELH PVFFLFVATPSVASVAWAAIAGEFALGARLAYFVAMFLYASLAARAVSLFGGVRFSLA WWAYTFPMTSAAAATIRYAAEVEDTRLARALCVALAAAATLTVGCLFATTVVHAVVLR SLFPNDVAIAITDHRKVKPKPKPKTTMEVHYKMDGNGDIEGGAPAMTPSPCMPMATAA </aaseq>

Gene Sequence

<dnaseqindica>1098..1256#1694..2227#2327..3508#atgcccccttcaatctcgatctgttaattaaatccatagaagagtgaagcctttatttttctcctttttcgaggagaagagtgaagcctttcaatctcccgttggtacgcttctccgaactctagctacgtcgaaaaagtaatgcttatcatttgattgatctcttattttgtacttgttgtgtatcacctcatgcaaaacgatatatcttggcctcaaaaatagttctttcgcatagaaaggctttatttgccaaggcaaatacctgattcttttacatttacagttataaaactgtcacgatagcggcattagtagacggcataacgctattgaagattcaaacttgacaatactgagacaatttgttaacaagatttagccaaaatctacaacccgaacttgataattataatatataaggaatcaacgagccttaggcctcccagtcgttctcttgtctagccatgcaatcatctcagatggtgcatctcttgtttaaaatagtctaaaataagagtttagctacaaatccaatcactaactgacaatgtaaacatatttaatacaaactctaccttggcgagtatgctacaccaatttgaattagttccgtgtacatttgaatctccgtgcacctgggcttaagctcattcattgctcatgcggagctatctgataagccttcaccaggtcgttcataactagacaaattattttgtggatttgctctaaattggttttttccaattttcctagcaaaactatagttaaaatttgtttgtgttcgtatattgtgaattgtccattttttctcatgtaattcaataaggtatgagagttagatgttttaagttcaagtcctaggtagcacaattaaataaaatcgtataactcatgtatattatattcgacgtttgagatataagggaccattgactaaggaagccttgagcgaggggaagttttccaatatagtgtggggggagtgttggaatataagtattcgctcgtcaatttaattaagcttttagattgaattgattggtgtccgcaactcaatattctcaatatatgccgcagatcacacctagacaatggaggttagcatcggcaagccagatgacgggcaatcgcttcttgctaatgttgaggcctccgatgaccatgccgcctttgatgccatggccacaagctcgcgccgtccacctagcttgcgccctctgcggcaccccaatgtgacatcccttgcaccagtaagtcacctcatactcaaacttattgatccattaattctgccatagcagacatgaacatgaaagggtgggtgagaccgtgtttagatgggactaatcttttaagtccctatcacatcggatgtttgacactaattataaatattaaacgtagactattaataaaacccatccataatcttggactaatttgcgagacgaatctattgagcctaattaatccatgattagcctatgtgatgttacagtaaacattctctaattatggattacttaggcttaaaaaatttgtctcgcgaatcagctttcatttatgtaattagttttgtaactagtctatatttaatactctaaattagtatctaaatacagaaactaaagttaaagtccctggatgcaaacaccacccgagtcattgtcgtttgtcttctttacagttgccaccactccatcgctgtgtaccacgacaaaccgaggtgatattcccgccacttgactcaccggactcctccgagctgaagaaggttatgtccatcagcctgccagcaacaccaaccggctttgccgcacctgttgccggtgccagcgactcgtcgggcatagatctccggaggcaagccatggcgtcgaacatgacacaaaggctacagcagcgctcgccaacgtcgcagagcaacaacggccggcggctcacagacgagacaacagcgttccagtcacccccgcctacccccggtggcggccggtcgtcgatgagccgggacaaacgctatgattcattcaagacgtggtcggggagactcgagaggcagatcagccacctggcgggcatcgggccggacatcccttcacctgcagggcaagtcgtggatgccgccatggatagtcaccaccattctcacactgtgtccacgcccgaggttggccgcttctttgccgcactggaaggccccgaactagaccaactcagggtaagctatagaaaaataaatgaaacaaccaaaaaataattcatatatatattagcggtttaaaagccaatgctgaaaaataagctacaactcgtatagtcggaggaggagctggtgctgccggtggataggacatggccattcctgctgcggttcccggtgtcggcgttcgggatctgccttgggatgggcagccaggcgatcctgtggaagaggatcgcggagtcgccgccgacgacgaggtacctgcacgtcgccgccgacgtgaacctcgtgctgtggtggctctccgtcgcgctcacctgcgccgtctccgccgtctacgcctgcaaggtggtcttcttcttcgaggccgtccgccgcgagtacctccacccggtcagggtgaacttcttcttcgcgccgctgatcgcctgcctcttcctcgccatcggcgtgccgcggtccgtcgcgccgtcgacggcggcgctcccggcgtggctctggtacgcgctcatggcgccgatgctgtgcctggagctcaagatctatgggcagtggatgtcgagcgggcagaggcggctgtccatggtggcgaacccgtcgaaccacctgtccgtcgtgggcaacttcgtcggcgcgctgctgggcgcgtccatggggatcagggagggcgccgtgttcttcttcgccgtcggcgtggcgcactacgtcgtgctgttcgtgacgctgtaccagcggctgccgacgaacgaggcgctgccgcgggagctgcacccggtgttcttcctcttcgtggcgacgccgagcgtggcgtccgtggcgtgggcggccatcgccggcgagttcgcgctcggcgcgaggctcgcctacttcgtcgccatgttcctgtacgcgtcgctcgccgcgcgcgccgtcagcctcttcggcggggtcaggttctcgctggcgtggtgggcgtacacgttcccgatgaccagcgccgccgccgccaccatccgctacgcggcggaggtggaggacacccgcctcgccagggcgctctgcgtcgcgctcgccgccgccgccacgctcaccgtcggctgcctcttcgccaccaccgtcgtgcacgccgtcgtgctccgcagcctcttccccaacgacgtcgccattgccatcaccgaccaccgcaaggtgaagcccaagcccaagcccaagaccaccatggaggtgcactacaagatggatggcaatggcgacatcgagggcggtgctcctgccatgacgccatcgccatgcatgccgatggcgacggcagcttagaggatttcttttcttttctttttgacctgccaagccaacgcgtccacatgcacatgcatggttttagcggtttgaatttgataagatgaatatttgaaatacaaagtgcctatgaaaatttatattgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0181100, RefSeq:Os07g0181100