Os07g0181700

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Revision as of 08:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0181700| Description = Guanylate-binding protein family protein| Version = NM_001065581.1 GI:115470894 GeneID:4342568| Length = 6022 bp| D...")
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Gene Name

Os07g0181700

Description

Guanylate-binding protein family protein

Version

NM_001065581.1 GI:115470894 GeneID:4342568

Length

6022 bp

Definition

Oryza sativa Japonica Group Os07g0181700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:4344946..4350967

Sequence Coding Region

4345134..4345237,4346165..4346267,4346397..4346466,4346552..4346590,4346684..4346801
,4346894..4346951,4347031..4347095,4347198..4347204,4347281..4347341
,4347720..4347779,4347898..4347917,4348005..4348070,4348276..4348443
,4348540..4348797,4349289..4349501,4350103..4350371,4350458..4350602

Expression

GEO Profiles:Os07g0181700

Genome Context

<gbrowseImage1> name=NC_008400:4344946..4350967 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:4344946..4350967 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtggcggagtcgcgcttcggcggtggcggtgctgtggatgctcgccgctgtggtggcggcggctgcgctggatcctgatcaggacgagctcgaacgcgcgtttccaatcgtcgaaccagatcatggtcacactaaactccgtcttgcaaaagaaggtttggaggcaattaaaagaatcgaaacaccaatagctgctgtcgctgttattgggccatatcgatctggaaaatcttttcttctcaatcagcttctctccctaacatgcaataaaggttttggagttggacatatgcgagataccaaaacaaaaggtatatgggtctggggtactcccattgagttagatgtgaatggctccaaagtttctgtcctttacctggacactgagggatttgagagcatcggaaaatcaaatgtatatgatgataggatatttgctctggccactgttttaagttctatccttatctacaatcttccagagacgattcgtgaagctgatatatctagactctcatttgctgttgaaattgctgaagaattctatggaagagtgaaggggcaagatgttgcttttgagccagcaaaactactgtggcttatccagagggatttcctccaaggaaaatctgtccagcaaatggttgatgaagctctccaacgggtgcctaacaacaatggagacaaatatattgatgaggtcaaccgaatcagagactctttggcatttatgggcgataacagcactgcttttagcttaccccagcctcatcttcaaagaacaaagctatgtgacatggacgatcaagaactggacccattatatatagaaaggagagatgagttgaagcaaattgttacttccatgataaaaccaaaacttttgcagggtagaactctaaatggaaaggagtttgtatctttcctaaggcagatacttgaggcgttgaataaaggtgaaattccatcaacaggatcacttgtagaagtattcaataaggcaattcttgagcgctgcttaaagttgtataatgaaagaatggaaagagtgggtctaccagtatcagtggataaacttcagctgattcacaatttggcagaagatgaagctagaaagctctttgacaagcagcattttggtaaacatcatactacccgatccatcctcaagcttgatgaagagatgagaaaggtcttcggaaactttggttttgccaatgagtaccagtcatcgaagctgtgcaaagcaaagttttcagagtgtgaagataaaatggaacaccttcaatccttgaagcttccttcgatggcaaaatttaatgctggatttcttcgctgtaaccagagttttgaaatggagtgtgtggggcctgccaaggaaagctatgaacgtaggatgtcaaagatgctcgcaaggtctcgtgctcttttcatcaaggagtacaacaacaaactattcaattggctggtgacgttctccttggtcatgattgtgattgcgcgctttgtgatcaagttctttttactcgaagttgctgcatgggtgatattcatcttcttagagacatacacgagattattctggtcgtcagaattgttgtactacaatcccatctggcacatgatcgtctcttcatgggaaaccattgtgtataacccagttcttgatattgacagatgggtgatcccaattgttgttgtgctatcatttttagctgtttactggcgttgcctcggtgtcaggaaacgaataggaagatcattgcttcctttgtacagaggttcttacggaagctccagtcgcccaagaacagattaa</cdnaseq>

Protein Sequence

<aaseq>MGWRSRASAVAVLWMLAAVVAAAALDPDQDELERAFPIVEPDHG HTKLRLAKEGLEAIKRIETPIAAVAVIGPYRSGKSFLLNQLLSLTCNKGFGVGHMRDT KTKGIWVWGTPIELDVNGSKVSVLYLDTEGFESIGKSNVYDDRIFALATVLSSILIYN LPETIREADISRLSFAVEIAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQQMVD EALQRVPNNNGDKYIDEVNRIRDSLAFMGDNSTAFSLPQPHLQRTKLCDMDDQELDPL YIERRDELKQIVTSMIKPKLLQGRTLNGKEFVSFLRQILEALNKGEIPSTGSLVEVFN KAILERCLKLYNERMERVGLPVSVDKLQLIHNLAEDEARKLFDKQHFGKHHTTRSILK LDEEMRKVFGNFGFANEYQSSKLCKAKFSECEDKMEHLQSLKLPSMAKFNAGFLRCNQ SFEMECVGPAKESYERRMSKMLARSRALFIKEYNNKLFNWLVTFSLVMIVIARFVIKF FLLEVAAWVIFIFLETYTRLFWSSELLYYNPIWHMIVSSWETIVYNPVLDIDRWVIPI VVVLSFLAVYWRCLGVRKRIGRSLLPLYRGSYGSSSRPRTD</aaseq>

Gene Sequence

<dnaseqindica>189..292#1220..1322#1452..1521#1607..1645#1739..1856#1949..2006#2086..2150#2253..2259#2336..2396#2775..2834#2953..2972#3060..3125#3331..3498#3595..3852#4344..4556#5158..5426#5513..5657#gttcgatcgatctcgccctcgactccaagccgacgagaggagttgaggagttgaggccatttcggtgcgtgcgcggcgggcggaggtgatcggtggcgtttcgttccgttggcggcgggcggaggtgattgctcgcgcggcgtggagcggtggggggaggatccgagcgggagggagagcgcgcgcggatggggtggcggagtcgcgcttcggcggtggcggtgctgtggatgctcgccgctgtggtggcggcggctgcgctggatcctgatcaggacgagctcgaacgcgcgtaagtgcgattcaccagaggcagcttctgattgtttgttttttttttcaatcgtatagcatcagactctgcttttggttgcattctgttgttgcctagcttaatggggttgagattacatggagattccggtgtgcatttttcgtgttcatctgtcgcacgcgatgctgtcatgctgcgaaattcaagttagtacggccgaattgcggctgttttttttcctatctcttaacgccacattggaaatgggcacttgagatgattgtgtgggaagtgggatattggaggggagcaggtagctgctgatgcatggttgaaatgagaaaccaagtggattattcatgtgagatgtggagtaggtagccggtgtgttgctacttgcatcaaccggactaattgagcgtggtgggtagatactttgttggttaatggatgtcaacttgctaagtttcacctacatatgtggataattaagaaagggaagacacatcttgaagatggaaaattttgaagtaattagagcaatagcaaacaaaatgatgacacattcccattattttcctaaaaaaaaaactgaagccgctttcgtgtcagcatagtgtgccccagttgaaccggctttggaactctcagatgatctaaccatatgaaaggcaccttcttaattgttttgatgaaagattgtagacttggttacttaacagaatcatcgtaggtctgcttcttcgacttaatgctgagtgaatgagagtacaacatgtatatggctggtactactagcatcatgcagtagttgtgtttcatttacttgttcatatggaaaacatcatttgctacaacgctcatatttatcaaatcagtggactgcaaagaaaaattattgtggttttggaagttcttttttttttaacaaagatagttgtgcaggtttccaatcgtcgaaccagatcatggtcacactaaactccgtcttgcaaaagaaggtttggaggcaattaaaagaatcgaaacaccaatagctgctgtcgctgtatgtttaaatgggctgtagctcacataaatacctgatagtttgcttttcccaactaatgccaaggcactatatttatttctttgtcgtggtgcatgctgagttatatgtctctgactctcaaatcaggttattgggccatatcgatctggaaaatcttttcttctcaatcagcttctctccctaacatgcaataaaggtacaatgagttcctgccttacatacataccatgctccaggaaagaggatacttggaatgatggattgataaattggctctgcaggttttggagttggacatatgcgagataccaaaacaaaaggtttggtggtgccaatgacaactttgtaatgttatcctaaatgattccatatcctaattgaaggattctaacactctgctccacatattgaaggtatatgggtctggggtactcccattgagttagatgtgaatggctccaaagtttctgtcctttacctggacactgagggatttgagagcatcggaaaatcaaatgtatatgatgataggtttgttgcttatagatgaaatgcatattaagtttgaattggaattttaaatggtgaaaaatggactgttagttcttttgtttttgttgcaggatatttgctctggccactgttttaagttctatccttatctacaatcttccagagacggtgtgtttctctggctcatgacatgctcacctccattctctcatttgatagctattaacttgacttatcttgatcatagattcgtgaagctgatatatctagactctcatttgctgttgaaattgctgaagaattctatggaaggtttgctttctgccattcctatttggagcttacaatttactaagtgcctccttaatgttctaacaaaatttccacttttctgtcggcatttgttgactccagagtgaaggtaatacttaaccttaagtgttagaattatttaaactagaaccactatgtcaaagttacagtgcttgtctctgtaggggcaagatgttgcttttgagccagcaaaactactgtggcttatccagagggatttcctccgtaagtttctgtttgcgttacatatgaacaattttattttgataatcaagtattcctttcagcatgttctgaatactagatgagaattagattttcataacaagaatagacaataaatcacaagtcggaccataaaaagttctaattgccttgtattaatgtttgtacattgtgaggtcggacttatgttgcggtacagactacagagggactagttaataacttgatatgtgctgtatattagcaatagtggaaatatacaggtctcgtgctttattttggtcaaatgtctattgttttgcatttcaccgtttgttgttgctgttttgtttttaggatattaaacttcttttaacattgttaactttcatgaggcagaaggaaaatctgtccagcaaatggttgatgaagctctccaacgggtgcctaacaacaatggttagttcaagttaccgtattaatggtttttatcatgatgatatttatttcctttctttcttcatgaaacaattgaagtggggatcttgaattaacctacttttgtgtattgctgcaggagacaaatatattgatgaggtacaattagttcgagctatatgctaataactggaagatatggcatactaatttgtttgaagaaacatggttttcatgttattttaggtcaaccgaatcagagactctttggcatttatgggcgataacagcactgcttttagcttaccccaggtttgtgaaaacatgatcatggtggggggaaaacatgagatatgttttttttagggaaaagtgatttgtgcatttaacatcattactatcacaattcataaaatttttggtattgagctaccttttaacatatatgctcattttgatgattatgtgctgtgatctttacatcactaagttattacattatgaacttttttgccagcctcatcttcaaagaacaaagctatgtgacatggacgatcaagaactggacccattatatatagaaaggagagatgagttgaagcaaattgttacttccatgataaaaccaaaacttttgcagggtagaactctaaatggaaaggagtttgtatctttcctaaggcaggtaatacctcttggcttgtttttttttatgcatcttaggcaggtaatcttgaaactcttgtgagctgttatctgaagttgcttacctttattttagatacttgaggcgttgaataaaggtgaaattccatcaacaggatcacttgtagaagtattcaataaggcaattcttgagcgctgcttaaagttgtataatgaaagaatggaaagagtgggtctaccagtatcagtggataaacttcagctgattcacaatttggcagaagatgaagctagaaagctctttgacaagcagcattttggtaaacatcatactacccgatccatcctcaagcttgatgaagagatgagaaaggtttgcctgacaataaatattcatgcgtgtttaatgttgtcttccattttcagataataaaacgacgtcattgatgcaatttttatgttgtaatgaatatgaatatggattgaagtatatgttataaacattatatcgaactgagatgctatggtcttcagttcttcacataagaaacacttgattcttcatattctgtcataaaattctattattaattactaatagccataaatcaagtttgatagttcattgtgtagtggtagtacatcttttgtgtagcaacaagttggatttctttccatgccttttgtgcttggatgctttgttttgaacacgaacgaattttttctttcagattttatagggtatctctggtgagattcttacatttgaagcattccatttaggaataaaactcgtttgttgcttacaacctatgcaaaatggataatatatcttcaatgtgtttaactgggtattctttttaggtcttcggaaactttggttttgccaatgagtaccagtcatcgaagctgtgcaaagcaaagttttcagagtgtgaagataaaatggaacaccttcaatccttgaagcttccttcgatggcaaaatttaatgctggatttcttcgctgtaaccagagttttgaaatggagtgtgtggggcctgccaaggaaagctatgaacgtaggatgtcaaaggtccgtctcttttaacttgagacatcttctatgatgggaaagaacaaatggattttgtacccacttaaaattcagatcaatttagggataatgcagtaatacatggagttgttaggtgtatccagttacaaaagtagcatatcacttttgactatcagattttgcatcaagtttttcaatactccctccgttcctatatactaattatcaccattgatcaattctgttgcaactttgaccagtagttcttatgacagagtaggtagtttttctctgctacttatgtgagcatttttagaagtcaaatcgagtcaaggtttcatgtagtaggtaccatttcacccattatgaatagcaaaagggaaaagcagagatgattgtccatatgtagaattcgaaagtaaaacatctttattcaccttccttcctcttttttttttcctggtaaatacaccagcacgttctgatatgttgtaagttttacctgaaactcattttttgtccaactatgttctttattacttgtgttgtgtattcctgcaccaatctttcttgaactgatatactccttgatgataaccttatctctgcatggtcacagatgctcgcaaggtctcgtgctcttttcatcaaggagtacaacaacaaactattcaattggctggtgacgttctccttggtcatgattgtgattgcgcgctttgtgatcaagttctttttactcgaagttgctgcatgggtgatattcatcttcttagagacatacacgagattattctggtcgtcagaattgttgtactacaatcccatctggcacatgatcgtctcttcatgggaaaccattgtgtataacccagttcttgatattgacaggcaagtttcttctctctgtgaagtgcacaacatgaatgtaatctctattttgccttccttactgttacgatgcttgtcttgtgcagatgggtgatcccaattgttgttgtgctatcatttttagctgtttactggcgttgcctcggtgtcaggaaacgaataggaagatcattgcttcctttgtacagaggttcttacggaagctccagtcgcccaagaacagattaatccaggtctagaaatggtgatgaatgatgcaaatcgctgggaaaatccatgaaaatatccttttgccgtgtgatggatagtggacggcaaaaggatgttggctctatgcacacgctgcaagaagcttctcttgcaatccaagaagggaatatttaggctcagctcacggctcttagtcttactgacccaccaagcaaagcaaacgctaacgtatgaatgataatcaatctttgttctatatcgaaatgcttatagtaacaaagaaatataaccatactttatttcaatgtaaagatcattctttgtatattatggcacactagataataacaaagaagatctggtagtgtacaggccagagcagc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0181700, RefSeq:Os07g0181700