Os07g0182000

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Revision as of 08:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0182000| Description = Similar to Transcriptional activator protein| Version = NM_001065583.1 GI:115470898 GeneID:4342570| Length = 4441 bp...")
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Gene Name

Os07g0182000

Description

Similar to Transcriptional activator protein

Version

NM_001065583.1 GI:115470898 GeneID:4342570

Length

4441 bp

Definition

Oryza sativa Japonica Group Os07g0182000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:4354384..4358824

Sequence Coding Region

4354613..4354996,4355537..4355662,4355752..4355827,4356444..4356651,4356813..4356906
,4358200..4358622

Expression

GEO Profiles:Os07g0182000

Genome Context

<gbrowseImage1> name=NC_008400:4354384..4358824 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:4354384..4358824 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcacgtgttcgccgtcgacgagatccccgacccgctgtgggctccgccgccgccggtgcagccggcggcggccgccggagtagatgacgtcggcgcggtgagcggcggcgggttgctggagcggtgcccgtcggggtggaacctcgagaggtttctggaggagctcgacggcgtccctgcaccggcggcgagcccggacggcgcggcgatttaccctagcccgatgccggcggcggcggcggaggcggcggcgcgctggagtaggggctacggcgatcgtgaggcggtgggggtgatgcccatgcccgcggccgcgcttccggcggcgccggcgagcgcggcgatggaccccgtggagtacaacgcgatgctgaagcggaagctggacgaggacctcgccaccgtcgccatgtggagggcctctggtgcaatacattctgagagtcctctaggcaataaaacatcactgagtatagttggttccatcctgagttcacagaagtgcattgaaggtaacgggatactagtgcagaccaagttaagtcctggcccaaatggaggatcaggcccatatgtaaatcaaaatacagatgctcatgccaagcaagctacgagtggttcctcaagggagccatcaccatcagaggatgatgatatggaaggagatgcagaggcaatgggaaatatgatccttgatgaagaagataaagtgaagaaaaggaaggaatccaaccgggagtcagctagacgctcaagaagcagaaaggcagctcgcctaaaagacctggaggagcaggtatcactattaagggttgaaaactcttctctgttgaggcgtcttgctgatgcaaatcagaagtacagtgctgctgctattgacaatagggtactaatggcagacattgaagccctaagagcaaaggtgaggatggcagaggagagtgtgaagatggttacaggggctagacaacttcaccaggccattcctgacatgcaatctcccctcaatgtcaactctgatgcttctgtgccgatccagaacaacaacccaatgaactacttctccaacgctaacaatgccggtgttaacagcttcatgcaccaggtttctccagcgttccagattgtggattctgtcgagaagattgacccaacagatccagtgcagctgcagcagcaacagatggcgagcttgcagcatcttcagaatagagcttgtggtggcggcgcaagttcgaatgaatatacagcatggggatcgtctctgatggatgcaaatgagcttgtcaacatggagcttcagtag</cdnaseq>

Protein Sequence

<aaseq>MEHVFAVDEIPDPLWAPPPPVQPAAAAGVDDVGAVSGGGLLERC PSGWNLERFLEELDGVPAPAASPDGAAIYPSPMPAAAAEAAARWSRGYGDREAVGVMP MPAAALPAAPASAAMDPVEYNAMLKRKLDEDLATVAMWRASGAIHSESPLGNKTSLSI VGSILSSQKCIEGNGILVQTKLSPGPNGGSGPYVNQNTDAHAKQATSGSSREPSPSED DDMEGDAEAMGNMILDEEDKVKKRKESNRESARRSRSRKAARLKDLEEQVSLLRVENS SLLRRLADANQKYSAAAIDNRVLMADIEALRAKVRMAEESVKMVTGARQLHQAIPDMQ SPLNVNSDASVPIQNNNPMNYFSNANNAGVNSFMHQVSPAFQIVDSVEKIDPTDPVQL QQQQMASLQHLQNRACGGGASSNEYTAWGSSLMDANELVNMELQ</aaseq>

Gene Sequence

<dnaseqindica>3829..4212#3163..3288#2998..3073#2174..2381#1919..2012#203..625#aaaaaacccatgggttgcgtagccgtagctttcccaccatttccttctctccgaagcctcctcctctccgcttcctcccgcgaaaccaaattccaaagcatttgatcgaatttctcccaaacttttccagcgttttcaatttcgccccgatttcggttcgaaaacccctcgcgaattcatttcaaactcgtccgagagcgcaatggagcacgtgttcgccgtcgacgagatccccgacccgctgtgggctccgccgccgccggtgcagccggcggcggccgccggagtagatgacgtcggcgcggtgagcggcggcgggttgctggagcggtgcccgtcggggtggaacctcgagaggtttctggaggagctcgacggcgtccctgcaccggcggcgagcccggacggcgcggcgatttaccctagcccgatgccggcggcggcggcggaggcggcggcgcgctggagtaggggctacggcgatcgtgaggcggtgggggtgatgcccatgcccgcggccgcgcttccggcggcgccggcgagcgcggcgatggaccccgtggagtacaacgcgatgctgaagcggaagctggacgaggacctcgccaccgtcgccatgtggagggtactctctctcatctcgatcgctgcttgctttgcttgcttcatggcttgtacagttgtactggtgggttcaccatttggggtggtggtgatgggatggctgtggcgtaattaagtgcaatttttagggcatttcctgtgattactgtggctagatggtcgcaatttagcatagatgtgacatatcctagctgttactatgaatctggaccggctctctgtccagattcatagtactagatgtgtcacatccctctaaatctcttatattataaggagggagtataaattaattttataagagcacgcgttgatgtcgatatccgcatcgtaagcccaggcactactcacgtgtgtgctttcttatccatactttaatattgtcagagtgggatgagacaaactttaatattgtcggggtgtggtataatatttatattatttccgtgtatagatttaggagtaatatggattaggattgcatggaggtgtagagactttatgtgacttcttggagccgtgcattgcttgagtgcaaagttaacaatttggttacatgttgcaaaaatgatgtatagatcataggtcattgcacttattttgggtggtcctaggcggtatgattcatggaatattttttggaaattctgtattttaccatatttgcattacttttcttattattgttgtttgaaggaattattaggtcacatacccttggaagatgaaattattttagtagaaaaaaagaaactgttatattggaatctggtaaatttggacctagaaattctcaccagtcgattgtagatggggaagcagagctttctttttagagatttgctccgctccaacaaaaagtacctcgaggtactggtacctcatggtaccaaatcgtttccgatcgttggatctaacaatgcacatcctgcctaattagatccaacgatcgaaaatgatttggtaccgtgaggtaccggtacctcgaggtactttttgttggaccggagaaaatatcttctttttatgttagttttctaagtggggtatataatttttgcaattggatatcatactttgaactcattatgtgggttcagtttacaaatgactacagaacatgttgatctgagcttttgctagttgatttcagtttacaatgtgaaacggttccctatataagattataatgccattagaactaattaactatgagagtgtgtgtttagctccgatagttattaagtccctttgcattctgacttcaatttttggcatgtccatccatccacaggcctctggtgcaatacattctgagagtcctctaggcaataaaacatcactgagtatagttggttccatcctgagttcacagaagtgcattgaaggtattctattatgcatatgtgcttagttaaatcttctcagtacctatgagttatgacttatgagtaatctctaatgttgtaagcaaatctaatttttgcgtaatgtagttttcatattatatatatctgattggattttccccctatttcgacacattcaggtaacgggatactagtgcagaccaagttaagtcctggcccaaatggaggatcaggcccatatgtaaatcaaaatacagatgctcatgccaagcaagctacgagtggttcctcaagggagccatcaccatcagaggatgatgatatggaaggagatgcagaggcaatgggaaatatgatccttgatgaagaagataaagtgaagaaaaggtaatatgtattcttttgcttgtgtatttttatttttcaattcaacacatacaaagagtaaacactgagcattagcattagaaattaggggacttttacatctattgatttccttttttcttagaaatagcttttaagtaatatgctttagattatcaagataatggatccttagtttctttctaggtgtttcatgtttgtactggatgtatttgattatatacaacattctcacttttttcttagaaatgcttgagctaatgcttgctaggtgtttcaatgctttatatacctgactgaattttggtaatgcttgttacaagctggtgcattaaggataattattgtttccgtgcaagcagctattcatgcaaaaaaggaaaaatgcaacgtgtatgattagaacaatttaggaggcatttgcttcttgcttttcataacatgctgggaatatcatgtcctgttgtgtctagttgctttttctacatatgaaaaattgagtttatctactgtggtcttttttttcgcagcagtcagacattcatgtcgcctttttttgtgtaataaatacagccggatatttgagatttgagcttgtgttcttgtccaatttcaggaaggaatccaaccgggagtcagctagacgctcaagaagcagaaaggcagctcgcctaaaagacctggaggagcaggttttgtgttttacactattccatttgactgcacaacaaagttttggaatatgtaagtaacaagtgtaattgttgctaaatcattgcaggtatcactattaagggttgaaaactcttctctgttgaggcgtcttgctgatgcaaatcagaagtacagtgctgctgctattgacaatagggtactaatggcagacattgaagccctaagagcaaaggtatgcaactgtttaagtgccttttagtcctctgtatgaactgaacctctctttcaaataggtatccaattatccatgtgcattgattctggtcagtattgtgcatctttcatggtgtagaaaaccggaatattctacatatcaaacatataccaaattttcttggaatgaaacgaacttctagcatttgttcttaaaatttggtacaggagatattgcaaatgttgtcctcttgctccattcgaaggattaagttgtttgccatctattataacctgcaacaattagactcacttgttttgtcttgaaacaaccgggtgtaactacttttctttttcctgcaacgtaccaggtgtaaataatcgcttgccgaatggtgataaccaattcacacaatggatcacaatcaattttaacaaagaacctgagctacactacactactgcggtgtcgtatcttatagccatatgcttctagaccacaactgaaaattcatgaaccatgcgatgtgggttagctaacatcttgacatgattgcaggtgaggatggcagaggagagtgtgaagatggttacaggggctagacaacttcaccaggccattcctgacatgcaatctcccctcaatgtcaactctgatgcttctgtgccgatccagaacaacaacccaatgaactacttctccaacgctaacaatgccggtgttaacagcttcatgcaccaggtttctccagcgttccagattgtggattctgtcgagaagattgacccaacagatccagtgcagctgcagcagcaacagatggcgagcttgcagcatcttcagaatagagcttgtggtggcggcgcaagttcgaatgaatatacagcatggggatcgtctctgatggatgcaaatgagcttgtcaacatggagcttcagtagtaggagcatatcctaacaacatgatgagagcatttggaggtgcaaatttgcaacctgcaaatgctgttttgtagtagtagttgttgtcgctgtttttgtctgaaactgtagtttctatggattttggacttgctgaggaacatctgcggctgttgttgtttcaaattgagaaaatgagggacaatgggacatggtggtctcccttaatatagcgaaaaatggttggaat</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0182000, RefSeq:Os07g0182000