BGIOSGA008860

From RiceWiki
Revision as of 18:53, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA008860

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008860, complete gene.

LocusTag

P0666E12.4

Ensembl Transcript ID

BGIOSGA008860-TA

Ensembl Protein ID

BGIOSGA008860-PA

Length

2474

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:30515187..30517660

Sequence Coding Region

30515187..30515844,30515991..30516067,30517622..30517660

Genome Context

<gbrowseImage1> name=IndicaChromosome02:30515187..30517660 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:30515187..30517660 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTGTTCCCGGCACACCCTGACCTGCAGCTCCAGATCAGCCCTCCTCCTGCCACCAAGTCAATGGACTTAGGGTTTTGGAAACGAGCTCTTGAAACCTCCACGACCACCACCACGGCGGCGGCGGCGGCAAGTACAGGTCCTTCCGTCGCTACTTCCTCCTCGCCGCCGGTAGCGAGTGGCGGGGTTGGCGGCGGTGCCGGCGGCTTCTACCAGCAGGCGGCCGTCGCGCCTGCAGCTAACGGCCACGGCCATGGCCATGGCCATCACCACCACCACCACCAACATCACCAGCTCGGCGGCGCACTCCAGTTCTTGCACCGCACCCAGCCCATCCCGCCGCAGGACGCGGCCGCCGGCGGCGGCCTGCAGGACCTGGCGTTCGCGCGGCCCATCCGGGGAATCCCCGTGTACAACACCTCGCGGCCGCTGCCCTTCCTCCAGAGCCACCACCTCCAGCACCACCAGCATTGCTACGCCGACACGATCGGCGTCGCGCCGGGGGCCGGGCCGAGGTCCCCCAGCAAGCAGGCGGCGGCGCTGCGGCTCGCCGCGGCGCCCGCCAAGCGTGGCGCCCGCGCGCCGCGGATGCGATGGACGACGTCGCTGCACGCGCGGTTCGTCCATGCCGTCGAGCTTCTCGGAGGCCACGAGAGAGCTACACCCAAGTCAGTTCTTGAGCTAATGGACGTGAAGGACCTGACCTTAGCTCATGTCAAGTCTCACTTGCAGGTACGAGTGTACGACCCTGATTGGATTTGTAGTTCATGA</cdnaseq>

Protein Sequence

<aaseq>MELFPAHPDLQLQISPPPATKSMDLGFWKRALETSTTTTTAAAAASTGPSVATSSSPPVASGGVGGGAGGFYQQAAVAPAANGHGHGHGHHHHHHQHHQLGGALQFLHRTQPIPPQDAAAGGGLQDLAFARPIRGIPVYNTSRPLPFLQSHHLQHHQHCYADTIGVAPGAGPRSPSKQAAALRLAAAPAKRGARAPRMRWTTSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQVRVYDPDWICSS</aaseq>

Gene Sequence

<dnaseqindica>1..658#805..881#2436..2474#ATGGAGCTGTTCCCGGCACACCCTGACCTGCAGCTCCAGATCAGCCCTCCTCCTGCCACCAAGTCAATGGACTTAGGGTTTTGGAAACGAGCTCTTGAAACCTCCACGACCACCACCACGGCGGCGGCGGCGGCAAGTACAGGTCCTTCCGTCGCTACTTCCTCCTCGCCGCCGGTAGCGAGTGGCGGGGTTGGCGGCGGTGCCGGCGGCTTCTACCAGCAGGCGGCCGTCGCGCCTGCAGCTAACGGCCACGGCCATGGCCATGGCCATCACCACCACCACCACCAACATCACCAGCTCGGCGGCGCACTCCAGTTCTTGCACCGCACCCAGCCCATCCCGCCGCAGGACGCGGCCGCCGGCGGCGGCCTGCAGGACCTGGCGTTCGCGCGGCCCATCCGGGGAATCCCCGTGTACAACACCTCGCGGCCGCTGCCCTTCCTCCAGAGCCACCACCTCCAGCACCACCAGCATTGCTACGCCGACACGATCGGCGTCGCGCCGGGGGCCGGGCCGAGGTCCCCCAGCAAGCAGGCGGCGGCGCTGCGGCTCGCCGCGGCGCCCGCCAAGCGTGGCGCCCGCGCGCCGCGGATGCGATGGACGACGTCGCTGCACGCGCGGTTCGTCCATGCCGTCGAGCTTCTCGGAGGCCACGAGAGTACGCAAACCTGCTTGCTGTTTTTTTTTTCTTTTTTTTGCATCTTCCAAACTTCTTCATGTTAGCTAAACAAGAATTGAACCACATATGCTACGCAGTGTTCCTGAATTTTTTTTCACTAATTTTCTCCAATTTTGGTTTTGCAGGAGCTACACCCAAGTCAGTTCTTGAGCTAATGGACGTGAAGGACCTGACCTTAGCTCATGTCAAGTCTCACTTGCAGGTGAGTATATCATCTAATCCTTCAAGACCGGTTAATTGGTTAATCTGATATATATCCGGCTGAATTAAGCTTTCTATCCCTCTCTCAGAAATTAAACCATTCGAGTACTTCCTTTTCTAATAAAGAGTCGTACCAGCGTAGATGTACATCTACTCCTAATTAACAATTTATATCCACACCAAGGAGTACTGTACAAAATACAAATACGTGCCTGGTATATATATGGAAGACATTCATATTATACACTATTCCTTTCCTTTATCTGAGGACAAAAAGTTAATTACGTTCGATCCTTTCTCACACACAGTAGCTCATGCATGGAATAGTCATTTCTCAGTTCACTTGCCGGCTGGGCAGTAAAAACATCTCTCTCTCTACAAGTTTCACTCCCCACATGCATGTCCTTGGCTAGATAGATAGAGAGAGAGAGAGAGAGAAGAGAGAAAAGAGGTGTAAGCTTAGCTTTTGCAACACGGGGGGAGCAGCTTTTCAATAAAAACTCCGAGATGAGCAGTTGGGGCACAAAGCTATAGCAGCAGCACATATGCAAACGCAGCGTCAGTGCAGCGTGTTGTTTGGCCATTAAAAGCTAGCCGCGGCCCGGAGACGAGACGACATGCATGCACGCACCGCGCGGAGGATGGATGGATAGATGCGTTTCTCTCGCTCGCTCGCTCGATCGATCGATCTCGCACGCACGAAGAGGGGATCGAAAGGGCATTGATATGCATGCTGCCCAAGAGCAGATCATGGGCAAGTACAACCACGGCATCATTTCTCAATAATTAAGCTTCAACACACACGCACCCCGGCCTCTGCCTGCTTTGAGCTGCAAGCTGCACGCTGCACAGTCGTAGTGGTAGCAGCAGCAGCAGCAGCTGCTGATCGAGCCATCAATGCCTCCGTTTGTGCTGTGTGCATGCAGGCGAAAAATTTATGGTCATTTCTCTCTCTCCTTGTACTACTCCTACCACTACTGCTCCTTTAGTTTTTGTTTTTTGTTTTTCTTTTCTTTTTTGAAGATTGTTACGGAATAGTAGTCCTTAGGAGTACTAATTTGACTTCATTTATACCAGCTCTCCATCCATGAAATGCATGTTATGCATTTGGAAAAAAGAAACGTATTATATTCCTCATATAAAAAAAATCCTATGTATTCCTGAAGAATATTGGTTACCCCAACTTCATGTAAGTACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGGACGAAATGGATATGAAGCATGGTTTGTACGTTGTGTATAAGATGTATACCTAGCTGGGGGCCAAGCGTTAAGAGAAAGATTTCATCTTTTGTTATGCCAAAAAAAAAGTGTAAAGAGAGCGCATATATGTGTTGTGTATATGTGTGTATGGACCATGCATGTATATGGAGTCTGATTGCTCTGCTCGGTCTGTCTCTTTAGCTAGAAATAGATTCCTAGCTTCACTGTAGTATTTACTATGCATGTCATATATAGGTACGAGTGTACGACCCTGATTGGATTTGTAGTTCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008860