Os07g0187700

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Revision as of 08:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0187700| Description = WD-40 repeat containing protein| Version = NM_001065612.1 GI:115470956 GeneID:4342601| Length = 5167 bp| Definition...")
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Gene Name

Os07g0187700

Description

WD-40 repeat containing protein

Version

NM_001065612.1 GI:115470956 GeneID:4342601

Length

5167 bp

Definition

Oryza sativa Japonica Group Os07g0187700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:4714632..4719798

Sequence Coding Region

4714843..4715016,4715149..4715249,4715972..4716104,4716471..4716562,4716857..4716956
,4717044..4717116,4717198..4717318,4717778..4717897,4719061..4719131
,4719217..4719395

Expression

GEO Profiles:Os07g0187700

Genome Context

<gbrowseImage1> name=NC_008400:4714632..4719798 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:4714632..4719798 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaggcggcggaggtggcgaggggaaggtggcgtgcgcggcgtggatccggcgccgggaggagaaggagaaggcgacgcgcgtcttcgcggcgtacgggcgggcggggtcgccgccggccgtggaggtgctcgggttcgactccaaggagtgctccctctccgaacccctggcgagggcggagctcggggaggagccgggcgacgcgccgcgtggcatcacggtgcaccccagcggcgacgagctcgtctgcgccacggccaaggggtgcaggctattcaagctgatttttgaagagttcactgttcgacttatttcaagagacgctccaccacttgaatccgttggaccgcagaagtgtcttgcttttagcactgatggatctaaatttgccattggtggtgaggatgggcatctcagaatatttcattggccgagcatgaatgtgctcttagatgaacccaaggctcataagtccttccgggacatggatatcagcttagattcagaatttttagtttccacatccactgatggttctgcaagaatatggaagatagatgagggggtaccattggtcaatttgactcgatctgcggatgagaagattgaatgttgccgcttttctagggatggcatgaaaccattcctgttttgcaccgttgcaaaaggtaacaaagttgtaactgttgtctggaacataagtgactggagtcgaattggatacaagagacttctgggaaaacctatctccacactttcagttagcatggatgggaagtatctggctttggggagccatgatggtgatttctgtgctgtggatgtaaagaagatggatgtttctcactggagcaagaaggtccatcttggttctccggtttcctcaattgaattttgtcctactgaaagggccgtaatctccacatcgcatcaatggggagcagagctgacaaagctgaatgtccctgctgactggaaagaatggcaagtctggctcatactcttatctcttttcctagtgtcagccatcctgttctatatgttctacgagcgctccgattccttctggaactttccaatggggcagcatcagccagccaagccatggagtgtcatgaaggagtctcctccagttcctgaggaccagaacccctggtga</cdnaseq>

Protein Sequence

<aaseq>MAGGGGGEGKVACAAWIRRREEKEKATRVFAAYGRAGSPPAVEV LGFDSKECSLSEPLARAELGEEPGDAPRGITVHPSGDELVCATAKGCRLFKLIFEEFT VRLISRDAPPLESVGPQKCLAFSTDGSKFAIGGEDGHLRIFHWPSMNVLLDEPKAHKS FRDMDISLDSEFLVSTSTDGSARIWKIDEGVPLVNLTRSADEKIECCRFSRDGMKPFL FCTVAKGNKVVTVVWNISDWSRIGYKRLLGKPISTLSVSMDGKYLALGSHDGDFCAVD VKKMDVSHWSKKVHLGSPVSSIEFCPTERAVISTSHQWGAELTKLNVPADWKEWQVWL ILLSLFLVSAILFYMFYERSDSFWNFPMGQHQPAKPWSVMKESPPVPEDQNPW</aaseq>

Gene Sequence

<dnaseqindica>212..385#518..618#1341..1473#1840..1931#2226..2325#2413..2485#2567..2687#3147..3266#4430..4500#4586..4764#acagtcaaaggataacccagcgaatatcccatccatccaacccgtccatccgggcccaccacaacgcgtcatcaatcaacccatccatcccccgcaataatttctctcgcttccgccggtcgccgcctccctccgccgctttcttcccctttaaaaccctcccaaaattcaaacgcgaccaagccgccggcgaggtgaacgaaacccaaccatggcaggcggcggaggtggcgaggggaaggtggcgtgcgcggcgtggatccggcgccgggaggagaaggagaaggcgacgcgcgtcttcgcggcgtacgggcgggcggggtcgccgccggccgtggaggtgctcgggttcgactccaaggagtgctccctctccgaacccctggtacgtacgggagctcccccctctcctcctcctcctcctcctcctcctccgagctcccaaggaattcgaggtttggttcgccggcttgacttccggggtcgtggttgtgtggtttgtttgtttgtgctgcaggcgagggcggagctcggggaggagccgggcgacgcgccgcgtggcatcacggtgcaccccagcggcgacgagctcgtctgcgccacggccaaggggtgcaggtgcgtgcctccactgcttctcttctcgttgactgttctatcatttgcgggaatttctcaggcggggaggggaggggtgatatgattagttaggagttcggtgttctaccggtagattattgagctaatgcctgtgtagtgtcggagatttcggattattagttcgattcagctgatttgagggtggtaatttggttaattgtgatgcgggagctggtttggttgctgctggctgcctggctggattaggtgatttagaaagcagtgtgaatccgtctgtttagacttcagattgtagaggtctgtgttatcaatgtggctaattatgtttagattgtagtgcggaattgactttctgtgttcatttgatcatttgctgttccagtaacgttcaattaggctttacacttcaggttttctatagaagggttggcttggatgttgcaacctaaaataaaaagggccaccgaagttgatctttagtagggttaactacctcaatgaaatgatcattagaatagcacacatgttgacttgttaatcaaattataaatgcacagtatatatatataattccatgccattttgtactttttagttctgattgtgttatcattttatcaaagccttctgtttgcactgttacaacctgctttctcttttttctgttctctttcactaagactagaactttataattaaaccacatgtttgaactgaaggctattcaagctgatttttgaagagttcactgttcgacttatttcaagagacgctccaccacttgaatccgttggaccgcagaagtgtcttgcttttagcactgatggatctaaatttgccattggtggtgaggtatcggattgctatatgttgatattggagttttactgatcagttctctctctctctctctctctctctctctattttctagtttgcttctatttggtgattatgtgtttccatatgctgcatttatacatcgttaagaagtactatatgtgtattatagaagccatgtgattttaggcacaatatccactgttgtaccattctgtcagattattccatccagaattccagatggttcagttttttatggtctggtgttattgcccagtgtatttagtttgataataatgctgctctctagctgaacttgtacaaagtatctttctatggttcttacaatgctttattttatttttaccactataggatgggcatctcagaatatttcattggccgagcatgaatgtgctcttagatgaacccaaggctcataagtccttccgggacatggatatcaggttagggcaagtgcaagcataattattttcctttattatttgcaaaagaatcccaggatattctcatctgttgaacaagtgttgttgtaaatggcgcaatcatgtagccgttatcttgagagagtaaccaagaactttgataacgtagcagtagtgttggtccaaaccttaatgaagcattttggtcttggaagactcttttttagaccgaagcgattctttgaacctttggttttcgtccctgtgctttattgtgaattgacttttgcaatactgctgcttttcctcttgtagcttagattcagaatttttagtttccacatccactgatggttctgcaagaatatggaagatagatgagggggtaccattggtcaatttgactcgatctgcggtatgatgcgataaatttgtgcaagtcatgttctcttgttgagatactgaaagccttaaccatttggtgttctggttttctatgcaggatgagaagattgaatgttgccgcttttctagggatggcatgaaaccattcctgttttgcaccgttgcaaaaggtatactttctattgtggtccagaaatagatttatgcatatcagatgatttttctatatatgtgctttgtcattggaacaggtaacaaagttgtaactgttgtctggaacataagtgactggagtcgaattggatacaagagacttctgggaaaacctatctccacactttcagttagcatggatgggaagtatctggctttgtaagtacatataaatactgttgatcttatcatactgaacaagtatataactccattgcatttctaggaacatttacaatgccaaatttcaagactaacataagctactttctcctagtaacttcactattttgtcctttttgaagagctcaaaaacttgcttgcatttttttgttacattctcacattgacatgtaatatatcaacaacttgaaacaactgtcacataaataataacaaagaattactctagttgacaaggatgttgcgtagctctgaaaaaaatggacgaaaaacattaacattataaattgtaatagtgacagtatcagctggagtaatgtttttttcctaataaatatgcagtgccccaatactagctaacatattctaaactgaattgcttttgatgtatttagtgcaccgacatgtgaatgaattctgtatttcttctttcagggggagccatgatggtgatttctgtgctgtggatgtaaagaagatggatgtttctcactggagcaagaaggtccatcttggttctccggtttcctcaattgaattttgtcctactgaaaggtactggaactctgtaaagatggcatgtttatcacatcttgaatcttatggatttctagtttgttgtacactgctgttgtactgatttctagtaaggtagtagcttagtgttcactggcatgtaggcgccataatgtcagactcatggttgttaaggcgtcgctatggcgtcgctatagcactagggcgtgccgaggggttaaggcgtccctccgccttaagggcttaacgccataacccagagagagagaaagagagaggtgaaggcagcagcaactaccccttttcactgttctctgctccatgtcattgccatcttactcctcagctctggtttccactctcttcctctctctcctgtgccagattcattttgactaagggagcagcgccagatctatccaagggaagagaagcatagctggattcgttctgaatgaggggagaaaggagcacatatagaggagcagagctagcacgaggaaaaagatcaggggagaaaggagcacatatagaagagcagagctagcacgaggaagaagaactggcgcgaggaagaagcgatgcacaggcgtgaggaagaagcgacatcggaggcggcgctgtgagaggagagacgcacctggtgtgggtattagggttgtttccttgaccatgggctggtatgaaggttattgggcttttgtgggctggcctgctaggctaattttctctctccctcttctgatcgctgctaatcacgtagattaaggcgtcgccacgccttagcgcattaccgctatagcgtaaggcgtgggtgggtcgcctcaggtcgccttaccgccttaacaaccatggtcagactatcaaatgccatgcttataagttataaatcaatgcttcatagattgtaattgtctgtgtatgcctgcaggctgcactgcataatgtcttaagtgggatgtgagtctgaatgttcatcttttactaaatttgctttagtttagcctggaaaagattgcaagataacatcttcctcctgctgggtttggtagggatggcccttatgcatttcatttattcatgcaagaaatgtttctcttaaaactaaatgacctgtccttctccaatttccggagcatctctttgtttatgttataacatgatgcctgctgataccgcagggccgtaatctccacatcgcatcaatggggagcagagctgacaaagctgaatgtccctgctgactggaaaggtacatgtctcataaaatgcttcttggctctcctgtggtataatttaccatactaacgaaatctttttgtgttattcttctgcagaatggcaagtctggctcatactcttatctcttttcctagtgtcagccatcctgttctatatgttctacgagcgctccgattccttctggaactttccaatggggcagcatcagccagccaagccatggagtgtcatgaaggagtctcctccagttcctgaggaccagaacccctggtgaattatctttcaagcaatcaagcatttgggtgttgttttatttcataatgaaagggttttttccaagcctaattcatgttgtaccattttacttgttcgccgatctgaccacgtcagtatttatctaggtaaatcagtaaaatgccactgtaattggtggtctgatggtagttatgaaaatgccatcgacttccaatgagactttcagtggcatttttaagtctattgtaccttgcagtgggatttatccacgtgcttatttacccccttctctttggtagtcaataactgaatttatcagtgtgttctacttctgtatatgtgggttgggatgtgagtacaagtacatgtgaactcagctttaattaagccgctggcagttgttaattgcaggatgttttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0187700, RefSeq:Os07g0187700