Os09g0454200

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Revision as of 07:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0454200| Description = Conserved hypothetical protein| Version = NM_001069885.1 GI:115479512 GeneID:4347245| Length = 4960 bp| Definition ...")
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Gene Name

Os09g0454200

Description

Conserved hypothetical protein

Version

NM_001069885.1 GI:115479512 GeneID:4347245

Length

4960 bp

Definition

Oryza sativa Japonica Group Os09g0454200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17716279..17721238

Sequence Coding Region

17716763..17716776,17717332..17718076,17718164..17718529,17718703..17718812,17720784..17721018

Expression

GEO Profiles:Os09g0454200

Genome Context

<gbrowseImage1> name=NC_008402:17716279..17721238 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:17716279..17721238 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaagcccgtcgatgtggagctcggcggcgcggcaggcctcgagatcgccggcggcggagggggaggagggggaggggtgtgggccgtcgccggggcgatcggccgcgccgcgtcgttccggtgcgtgttcgtgctcgcgctctccgtgggagtcctcgtctcggcgctgctgctcctcgtgcccacccgcgggcacgggttcctctccgacgaccccgtcgtgctcggagctgaaatccaggttggttttaccttggaaaagccagtttcattccttgctgctcacatggataaactagggggtgacatatttgaagaaattggtattcctaatagcaaggtttccattgtgtcaatgcgttctttgacctctaagtactccacaaatgtggtttttagtgttcttccttctccaaaagaagcctcaataagtttgcctgccctaagtgtgctgagatcatccttaatagcgatgatgctaaatcaggtgaacctatcgttgacagaaccactttttggccatccatcttccgttgagctgttgaggttccctggaggaattacagtaattcctgagcagtctggttctgtatgggcggatcctcttttcaactttgtgttgaacaattccatttatcagatcttgggtaatattacagagctaaaggaccagttgaagcttggattgaacttgaggtcctacgagaaagtatatttgcagttcaggaatgagattggatcttcagttgatgccccggcaactattgaggcatctgttctagatgggagcagcattcttttaccatatagattgaaacaactagctcagctaatcaaagaacccaatgcaaggaaccttgggcttaatcactctgtatttggtaaagtaaaaggtgttcaactgtcatcatacctacagcattcgatctcagatttatctccgagtccatctccttcaccatctccatccccatccccatctccatctccatctccattcccttcttcaagtgtaccaccatctttctcaccatctgggagcatccattaccctgcacctccaacatatatgaacccaagtcttcctcctcaagcttcaccccctttgcctgacacaaatccttgctttccatgtttcaattgtgaccgcttttcttccgctggtagcccaacaggcaaaccaccttgttttcgcagagaccctaagctacctccatttatacactccccgcagccatctgttgctccttccccatatctttctccagcttttccaccaattcctggtcatgtagatcctcccaatcatttacctggtgcagtccctggaccaacttatcaaatgatgtcaataccttcaccctcattgcctgtgtttcgaccttcaatggctccatggaagaagcgacgaaaaaccaagtcccccccttcaattgccccttccccatattctctccattcctga</cdnaseq>

Protein Sequence

<aaseq>MGKPVDVELGGAAGLEIAGGGGGGGGGVWAVAGAIGRAASFRCV FVLALSVGVLVSALLLLVPTRGHGFLSDDPVVLGAEIQVGFTLEKPVSFLAAHMDKLG GDIFEEIGIPNSKVSIVSMRSLTSKYSTNVVFSVLPSPKEASISLPALSVLRSSLIAM MLNQVNLSLTEPLFGHPSSVELLRFPGGITVIPEQSGSVWADPLFNFVLNNSIYQILG NITELKDQLKLGLNLRSYEKVYLQFRNEIGSSVDAPATIEASVLDGSSILLPYRLKQL AQLIKEPNARNLGLNHSVFGKVKGVQLSSYLQHSISDLSPSPSPSPSPSPSPSPSPSP FPSSSVPPSFSPSGSIHYPAPPTYMNPSLPPQASPPLPDTNPCFPCFNCDRFSSAGSP TGKPPCFRRDPKLPPFIHSPQPSVAPSPYLSPAFPPIPGHVDPPNHLPGAVPGPTYQM MSIPSPSLPVFRPSMAPWKKRRKTKSPPSIAPSPYSLHS</aaseq>

Gene Sequence

<dnaseqindica>4463..4476#3163..3907#2710..3075#2427..2536#221..455#accgcactcaaccaacagtcggcgcaccagcagctgaggttggaggaggaggaggaggcgccgcccctcaccgcacctcgcgcggcgcgggcgcaggcggttgcgagcgacggcctcagcggcggcggcggcggcggcggtggtggtgaggaggaggaggaggaggagcggggagagtgtcgcggtgttgtcagggtgaggggagtcagatgcgcgcggaatggggaagcccgtcgatgtggagctcggcggcgcggcaggcctcgagatcgccggcggcggagggggaggagggggaggggtgtgggccgtcgccggggcgatcggccgcgccgcgtcgttccggtgcgtgttcgtgctcgcgctctccgtgggagtcctcgtctcggcgctgctgctcctcgtgcccacccgcgggcacgggttcctctccgacgaccccgtcgtgctcggaggtgagctcttcccggtcaaattttgcttccggtggtgcgagggtatggggattcgtgggtttaggtctagtgaagtggtggatcgatgatgggatgggggaattgctgcttggggatctcatgccgagtgttgacacttcgatcccgccttcatggagctaggatttgcgtgttttagtagcgaattttgtagtttccggtgttccgggttttgtgcgacgcctggttcgttcgctgttttgctattccaagttcccaactagcgaaaatcgcattccctcgtaattagttatcagaatcttacgtggtaatgcctacaaatctcttgtatgatctgggtcattaaattggatggtcgatgtactctggtgcgacatagatgtcagagcaaaagcttgtatggtagtacttggtttacccactccttattctgtgcacaacgtgtaattgtctattggacattggagatttctagtaggttttcaagcttgcagtgtgtggtcaaccgagatgtgcgatttgctcttcttcttagagtactagtgactgcggcaataacaggagttgatttattgattaacatggctgctacataatatgatgatggtgcctcaagataaaagtacgctaagatttgcttcactttggcaataactgtaaaagccgtttgttgactattttgtttgatgggtacttggtcttatgatgtgcaaactatgaactgtgaatggaagcttgacaagcatggcatttgctttgttgtaccattgaaattacatagatagttttgtttgatcacaatagatcgaagtatgaactgtgaatgaaggcttgacaaatatgccattttctttgtgcctttgtttcaccatagaaattacatatatatttttgtttgatcacaatagattaagtcattgagtagctatccttggagctggctatgacctatgtaccgttcctgataatattttagaatatgaaatgctttaagtaagtagatgtgttgttaatttatttcatataatgcgcaaatttatagataacctagtatttgagattcctagttaccctattgttcgtgtactattcacaaagttgtgttataggattgacattccatactcattatgtgcttatataacaagaaagaaagtccatatgttccatttgattatatcttctcttatgtagtgagtgtagataagctgctgtggaaatttttttttaagcataggatgttttttaggactggatggaaattgctttatattaatgtttcaggctttggatatatggaactttttacatttacattctcgaattcatcgtacatgtcataaatttcaagctcatatatggaaatccatgctgcctgcctcaggtggaaacttttagatccctaaatttgaggtttctaaggaaaaactcagcctccacccaaccaaatttgtagtttcatatgatgataactaattatatccagaacctttataatcaactttagtcgttgcatatagtaatgttcctcttataatccttgcatcactttttccatcattgcattttctacttctcattgataccaattttctttacaccctatattgttgaatgaaaatgctatgccatctttttgtttactcatttgcatccttaactagtattgtttagctatattgcatttgttggcagttggcgcagtccttcattactttctcatccgtggaagtgcctcagtgattcttctcaagtatctcgttatttcacatgccattttcattttatatggtatactgtattaataattgatttggcaatgattttagagtattccagaaatcgtcttgtttttttggcacagctattgtttgtattttttttttatgtcacagtgttaaatttagatgatgtctcttgccttataatgtatttgaggactgatagtgttttcaattttcatttattcagctgaaatccaggttggttttaccttggaaaagccagtttcattccttgctgctcacatggataaactagggggtgacatatttgaagaaattggtattcctaatagcaaggtgcctgatgcctgtttcttttttactaattttgtttcctctgcatataccatttgttaatttaaaggttcataattttcactctggtccacttgtgaacctaggagtgaaaattagacccccccagggagacctgaggacctaaaatggacttctcttattgtttgaaacaggtttccattgtgtcaatgcgttctttgacctctaagtactccacaaatgtggtttttagtgttcttccttctccaaaagaagcctcaataagtttgcctgccctaagtgtgctgagatcatccttaatagcgatgatgctaaatcaggtgaacctatcgttgacagaaccactttttggccatccatcttccgttgagctgttgaggttccctggaggaattacagtaattcctgagcagtctggttctgtatgggcggatcctcttttcaactttgtgttgaacaattccatttatcagatcttgggtaatattacagagctaaaggaccagttgaagcttggattgaacttgaggtcctacgaggtattgttgatttaatttcctcctgattggttacaaatttgtatgtgtttgtgtttaaaatttacaccctctgtcatatatgtgcagaaagtatatttgcagttcaggaatgagattggatcttcagttgatgccccggcaactattgaggcatctgttctagatgggagcagcattcttttaccatatagattgaaacaactagctcagctaatcaaagaacccaatgcaaggaaccttgggcttaatcactctgtatttggtaaagtaaaaggtgttcaactgtcatcatacctacagcattcgatctcagatttatctccgagtccatctccttcaccatctccatccccatccccatctccatctccatctccattcccttcttcaagtgtaccaccatctttctcaccatctgggagcatccattaccctgcacctccaacatatatgaacccaagtcttcctcctcaagcttcaccccctttgcctgacacaaatccttgctttccatgtttcaattgtgaccgcttttcttccgctggtagcccaacaggcaaaccaccttgttttcgcagagaccctaagctacctccatttatacactccccgcagccatctgttgctccttccccatatctttctccagcttttccaccaattcctggtcatgtagatcctcccaatcatttacctggtgcagtccctggaccaacttatcaaatgatgtcaataccttcaccctcattgcctgtgtttcgaccttcaatggctccatggaagaagcgacgaaaaaccaagtcccccccttcaattgccccttccccatattgtaagtaccctattctatgaagtgtttactttattatttgcttcaatatttcatgattaagacttttgaatggttggtttgatatggtaactcctgaataagatttagcattgatcgacttgactacactaacccaataatgaactgcactgtttgatttccatggcaactaccaacttagtaataataataaatttacattacactttgttagtttggcattatattcctgaagtgatagagtgagatatttttttcgcttcatctagaattttacaatgaatcaggtaggtgtactagtggtgtggtactaacctgtgaatcaatatgctgttaggtgaattaggtgaaccgggcattttgatttctttgtatattaacgtcatgccatcctaataatttaattcaaccttttaaaatacttacaaaaggtaccagtttatgtacgttttctttatatatctgtgccgctttgctcttttttttagttcgctattcttcagcagttcattgaacataaatatttcatttgacatccattgtcaaaatttgcagctctccattcctgaagtgagacttggctggtgccctggactgtttgcctacagagttaccagtgcacaaggtggttgtggttgcaaagtttgcttcttgaaatctcctgaagcatggagttgcaatcgtgagcgatcgtactgcaaaggcaggtttatgaatgcaatcatgagcaatcatactgcaaaaaggcaggttttgcttatcggttacttctaactgtatggtggtttctcgcacttcagagttggagtataactgtagatataggtctgtattatgctaatttaccagggtttttatgtcacgaaggtgactgccctacgcctctaccaaatatcaagtttctcaccgaagggttgggtgcttatggtagaggagaatgtaatgacttaccatagtcgaattgatgttgtatcttgcgatacgactgttcgtttcctgtaacatcatcatatactgagcataatacgatacatttacacccgtctttctgcg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0454200, RefSeq:Os09g0454200